Factsheet for PGSC0003DMT400022108

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 3
plasma membrane 3
extracellular 2
vacuole 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g064440.2.1	Tomato	plastid	97.98	97.98
CDY39771	Canola	endoplasmic reticulum, plasma membrane, vacuole	58.59	83.83
VIT_07s0005g04460.t01	Wine grape	plastid	83.08	83.03
KRH19633	Soybean	plasma membrane	79.69	80.42
KRH67468	Soybean	endoplasmic reticulum, plasma membrane, vacuole	80.73	80.31
KRG95750	Soybean	plasma membrane	80.08	79.77
CDX89842	Canola	plasma membrane	77.53	78.71
Bra015291.1-P	Field mustard	plasma membrane	77.53	78.71
AT1G04120.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	77.73	78.6
CDY18207	Canola	plasma membrane	77.27	78.4
GSMUA_Achr8P12730_001	Banana	plasma membrane	68.45	76.83
CDY03309	Canola	golgi	71.46	76.24
Bra036682.1-P	Field mustard	golgi, plasma membrane	71.46	76.03
GSMUA_Achr11P...	Banana	plasma membrane	69.69	73.13
TraesCS5A01G512500.2	Wheat	endoplasmic reticulum, plasma membrane	68.06	72.31
HORVU4Hr1G084290.1	Barley	peroxisome, plastid	67.41	71.57
OQU93255	Sorghum	plasma membrane	69.63	70.5
Os03t0142800-01	Rice	plasma membrane	69.11	70.3
TraesCS4D01G339000.2	Wheat	golgi	68.26	69.62
Zm00001d027625_P001	Maize	plasma membrane	67.8	69.52
TraesCS4B01G343800.2	Wheat	plasma membrane	68.06	69.24
PGSC0003DMT400011214	Potato	cytosol	6.92	63.86
PGSC0003DMT400080270	Potato	mitochondrion	40.89	54.58
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	46.18	53.56
PGSC0003DMT400045009	Potato	cytosol, peroxisome, plasma membrane	40.43	49.21
PGSC0003DMT400056413	Potato	mitochondrion	43.11	47.24
PGSC0003DMT400044938	Potato	plasma membrane	42.78	44.99
PGSC0003DMT400018927	Potato	plasma membrane	34.81	42.2
PGSC0003DMT400016069	Potato	endoplasmic reticulum, plasma membrane	37.75	42.13
PGSC0003DMT400023487	Potato	plasma membrane	39.58	41.34
PGSC0003DMT400029581	Potato	plasma membrane	39.71	39.79
PGSC0003DMT400083884	Potato	plasma membrane	37.82	39.71
PGSC0003DMT400074333	Potato	mitochondrion	38.73	38.41

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ncoils:Coil	GO:GO:0000166	GO:GO:0000325	GO:GO:0003674
GO:GO:0003824	GO:GO:0004871	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008281	GO:GO:0009628
GO:GO:0009651	GO:GO:0009719	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0019725	GO:GO:0030007	GO:GO:0038023	GO:GO:0042626	GO:GO:0055085
GO:GO:1901527	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M1AG76	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	EnsemblPlantsGene:PGSC0003DMG400008576	PGSC:PGSC0003DMG400008576	EnsemblPlants:PGSC0003DMT400022108	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF189	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002965E28	SEG:seg	:	:

Description

Multidrug resistance protein ABC transporter family [Source:PGSC_GENE;Acc:PGSC0003DMG400008576]

Coordinates

chr9:+:46130363..46141691

Molecular Weight (calculated)

170248.0 Da

IEP (calculated)

7.432

GRAVY (calculated)

0.186

Length

1531 amino acids

Sequence
(BLAST)

0001: MGINLFFDTA TISRHTSLFS LSTAFQGLNF LELSSICVNL TFFLVFLFIV SAKQIYLCVG RVRFRKDDSD GNSVPGRRRG DVEIQSIEIG RAFKASVLCS
0101: FYVLFVHVVV VGYDGVGLIR KATQGSSVNW TLLLFPVIQT LAWIVLSFSA LYCKYKGSSK FSLLSRVWWV VSFVICLCTL YSDSRELAIE GSSHLNSHVF
0201: ANLAVTPSLA FLCFVAIRGV TGIEVTRNSD LQEPLLPEEE PACLKVTPYS DAGIISLATL SWLNPLLSVG AKRPLELKDI PLLAQRDRSK TNYKVLNANW
0301: EKLKAEDPSE QPSLAWAILK SFWKEAACNA VFAGLNTCVS YVGPYLISYF VDYLAGVETS PHEGYILAGI FFTAKLVETL TTRQWYLGVD ILGMHVRSAL
0401: TAMVYRKGLR LSSSARQSHS SGEIVNYMAV DVQRVGDYSW YLHDLWMLPL QIILALAILY KNVGIASVAT LVATIISIVA TVPLARVQED YQDKLMGAKD
0501: DRMRKTSECL RNMRILKLQA WEDRYRVMLE DMRNVEFKYL RKALYSQAFI TFIFWSSPIF VSAVTFGTCI LLGGQLTAGS VLSALATFRI LQEPLRNFPD
0601: LVSMMAQTKV SLDRIAGFLQ EEELQQDATI VLPRDITNVA IEIKDSEFYW DPSSPSPTLA GIQLKVEKGM RVAVCGVVGS GKSSFLSCIL GEIPRISGEV
0701: RICGTAAYVS QSAWIQSGTI EDNVLFGSPM DKAKYKAVIH ACSLKKDLEL FSHGDQTIIG DRGINLSGGQ KQRVQLARAL YQDADIYLLD DPFSAVDAHT
0801: GSDLFKEYIL TALATKTVVF VTHQVEFLPA ADVILVLKEG RICQCGKYDE LLQAGTDFNA LVSAHHEAIE AMDFSNQSLE ETDKDPSPDG SALVTKKCDS
0901: VEKSIDSLAK EVQEGVSAPD QKAIKEKKKA KRLRKKQLVQ EEERERGKVS MKVYLSYMAA AYKGLLIPLI ILAQTLFQVL QIASNWWMAW ANPQTPGDSP
1001: RTTSVVLIGV YMALAFGSSW FIFIRAVLVA TFGLEAAQKL FLKMLRTIFR APMSFFDSTP AGRILNRVSI DQSVVDLDIP FRLGGFASTT IQLIGIVGVM
1101: TTVTWQVLLL VIPMAIACLW MQKYYMASSR ELVRIVSIQK SPIIHLFAES IAGAATIRGF GQEKRFMKRN LYLLDCFARP FFCSLAAIEW LCLRMELLST
1201: FVFAFCMVLL VSFPHGSIDP SMAGLAVTYG LNLNARLSRW ILSFCKLENK IISIERIHQY CHIPSEAPQI IEPHPPSSWP EEGTIELIDL KVRYKESLPV
1301: VLHGVSCKFP GGKKIGIVGR TGSGKSTLIQ ALFRLLEPEG GKIIIDNIDI STIGLHDLRS RLSIIPQDPT LFEGTIRDNL DPLDEHSDLE IWQALEKSQL
1401: GEVVRNKDQK LDTPVLENGE NWSVGQRQLV SLGRALLKQA KILVLDEATA SVDSATDNLI QKIIRTEFKD CTVCTIAHRI PTVIDSDLVL VLSDGRVAEF
1501: DTPARLLEDK SSMFLKLVSE YSTRSSGMPD F

Best Arabidopsis Sequence Match ( AT1G04120.1 )
(BLAST)

0001: MDFIEISLIF REHLPLLELC SVIINLLLFL VFLFAVSARQ ILVCVRRGRD RLSKDDTVSA SNLSLEREVN HVSVGFGFNL SLLCCLYVLG VQVLVLVYDG
0101: VKVRREVSDW FVLCFPASQS LAWFVLSFLV LHLKYKSSEK LPFLVRIWWF LAFSICLCTM YVDGRRLAIE GWSRCSSHVV ANLAVTPALG FLCFLAWRGV
0201: SGIQVTRSSS DLQEPLLVEE EAACLKVTPY STAGLVSLIT LSWLDPLLSA GSKRPLELKD IPLLAPRDRA KSSYKVLKSN WKRCKSENPS KPPSLARAIM
0301: KSFWKEAACN AVFAGLNTLV SYVGPYLISY FVDYLGGKEI FPHEGYVLAG IFFTSKLIET VTTRQWYMGV DILGMHVRSA LTAMVYRKGL KLSSIAKQNH
0401: TSGEIVNYMA VDVQRIGDYS WYLHDIWMLP MQIVLALAIL YKSVGIAAVA TLVATIISIL VTIPLAKVQE DYQDKLMTAK DERMRKTSEC LRNMRVLKLQ
0501: AWEDRYRVRL EEMREEEYGW LRKALYSQAF VTFIFWSSPI FVAAVTFATS IFLGTQLTAG GVLSALATFR ILQEPLRNFP DLVSMMAQTK VSLDRISGFL
0601: QEEELQEDAT VVIPRGLSNI AIEIKDGVFC WDPFSSRPTL SGIQMKVEKG MRVAVCGTVG SGKSSFISCI LGEIPKISGE VRICGTTGYV SQSAWIQSGN
0701: IEENILFGSP MEKTKYKNVI QACSLKKDIE LFSHGDQTII GERGINLSGG QKQRVQLARA LYQDADIYLL DDPFSALDAH TGSDLFRDYI LSALAEKTVV
0801: FVTHQVEFLP AADLILVLKE GRIIQSGKYD DLLQAGTDFK ALVSAHHEAI EAMDIPSPSS EDSDENPIRD SLVLHNPKSD VFENDIETLA KEVQEGGSAS
0901: DLKAIKEKKK KAKRSRKKQL VQEEERVKGK VSMKVYLSYM GAAYKGALIP LIILAQAAFQ FLQIASNWWM AWANPQTEGD ESKVDPTLLL IVYTALAFGS
1001: SVFIFVRAAL VATFGLAAAQ KLFLNMLRSV FRAPMSFFDS TPAGRILNRV SIDQSVVDLD IPFRLGGFAS TTIQLCGIVA VMTNVTWQVF LLVVPVAVAC
1101: FWMQKYYMAS SRELVRIVSI QKSPIIHLFG ESIAGAATIR GFGQEKRFIK RNLYLLDCFV RPFFCSIAAI EWLCLRMELL STLVFAFCMV LLVSFPHGTI
1201: DPSMAGLAVT YGLNLNGRLS RWILSFCKLE NKIISIERIY QYSQIVGEAP AIIEDFRPPS SWPATGTIEL VDVKVRYAEN LPTVLHGVSC VFPGGKKIGI
1301: VGRTGSGKST LIQALFRLIE PTAGKITIDN IDISQIGLHD LRSRLGIIPQ DPTLFEGTIR ANLDPLEEHS DDKIWEALDK SQLGDVVRGK DLKLDSPVLE
1401: NGDNWSVGQR QLVSLGRALL KQAKILVLDE ATASVDTATD NLIQKIIRTE FEDCTVCTIA HRIPTVIDSD LVLVLSDGRV AEFDTPARLL EDKSSMFLKL
1501: VTEYSSRSTG IPEL

Arabidopsis Description

ABCC5MRP5 [Source:UniProtKB/TrEMBL;Acc:A0A178WGC2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.