Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
YLoc:peroxisome
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G056800.1 Wheat plasma membrane 68.78 88.61
TraesCS2B01G069000.2 Wheat plastid 88.34 73.74
EES10452 Sorghum plastid 89.2 73.6
Zm00001d004361_P001 Maize plasma membrane 87.17 72.53
HORVU2Hr1G009580.3 Barley plastid 75.67 65.47
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 56.1 62.13
Os04t0209300-01 Rice plasma membrane 70.74 59.79
VIT_07s0005g00260.t01 Wine grape plasma membrane 59.23 59.37
CDY23680 Canola plasma membrane 58.37 55.63
Bra032248.1-P Field mustard plasma membrane, plastid 58.37 51.77
Os01t0356400-01 Rice plasma membrane 61.11 51.15
CDX76656 Canola plasma membrane, plastid 58.92 50.91
CDY11440 Canola plastid 59.08 50.84
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 54.3 50.58
CDY43277 Canola plastid 58.76 50.13
Solyc09g075020.2.1 Tomato plastid 59.31 50.1
KRH31883 Soybean plastid 58.76 50.03
PGSC0003DMT400029581 Potato plasma membrane 59.55 49.8
CDX93660 Canola plastid 59.08 49.74
Bra018722.1-P Field mustard plasma membrane, plastid 59.08 49.74
AT2G47800.1 Thale cress plasma membrane 59.0 49.74
KRG96433 Soybean endoplasmic reticulum 58.53 49.73
Bra007695.1-P Field mustard plastid 59.23 49.25
AT3G62700.1 Thale cress plasma membrane 58.84 48.86
KRH12057 Soybean endoplasmic reticulum 56.65 48.23
KRH37107 Soybean endoplasmic reticulum 56.18 47.68
Solyc01g080640.2.1 Tomato plastid 54.46 46.46
Os02t0288400-00 Rice plasma membrane 42.41 42.15
Os01t0902100-00 Rice plasma membrane 32.94 40.83
Os01t0173900-01 Rice plasma membrane 43.9 37.28
Os03t0142800-01 Rice plasma membrane 43.27 36.74
Os04t0588700-01 Rice cytosol, plasma membrane 37.48 35.93
Os05t0196100-01 Rice plasma membrane 39.67 34.12
Os06t0158900-00 Rice plasma membrane 39.44 33.99
Os04t0620000-01 Rice plasma membrane 35.05 27.54
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:BAF14165.1ProteinID:BAS88125.1GO:GO:0000166GO:GO:0000325
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005774GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlantsGene:Os04g0209200EnsemblPlants:Os04t0209200-01
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24223PANTHER:PTHR24223:SF215UniProt:Q0JES2SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123
TMHMM:TMhelixUniParc:UPI0000DD8F7ASEG:seg:::
Description
MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 9Similar to MRP-like ABC transporter. (Os04t0209200-01)
Coordinates
chr4:-:7301574..7312295
Molecular Weight (calculated)
141311.0 Da
IEP (calculated)
4.946
GRAVY (calculated)
0.128
Length
1278 amino acids
Sequence
(BLAST)
0001: FSWINPLISK GSRAALAADD VPPVAPDDTA EATYALFVSN WAAPPAPGTK AGHPVVTALL RSFWPQFLLT AMLGLAHLSV MYIGPSLVDR FVNFVRRGGE
0101: LTEGLQLVVV LLAGKAAEAL ASHHYEFQGQ KLGMRIHAAL LAAVYRKSLR LSTGARRAHG AGAIVNYMEV DAEEVANVTH ELHNLWLMPL EIAVALTLLY
0201: THLGPAVLTA VAAIAVVTVV VALANRRNLE YQFKFLGKRD ERMKAITELL NYMRVIKLQG WEETFGGKIH ELREAELGWL AKSMYFMCAN TVVLWSGPLA
0301: MTVLVFGTCV LTGVTLDAGK VFTATAFFHM LDGPMQSFPE AIASVTQATV SLGRLDRYLL DVELDDTTVE RVDDAGINPD GVVVEVRDGV FAWDVRGKKE
0401: NEEGDDNEDD EEGEEEEEEK DVEETPVLET VLKGINIEVR RGELAAVVGT VGSGKSSLLS CIMGEMDKVS GKVRICGSTA YVAQTAWIQN GTIQENILFG
0501: QPMDAERYKE VLRSCSLEKD LEMMEFGDQT EIGERGINLS GGQKQRIQLA RAVYQNCDIY LLDDVFSAVD AHTGSSIFKE CLRGMLKGKT ILLVTHQVDF
0601: LHNVDNIFVM RDGMIVQSGK YDELLDAGSD FLALVAAHDS SMELVDQSRQ VVKTEYSQPK AVARIPSLRS RSIGKGEKVL VAPDIEAATS KIIREEERES
0701: GQVSWRVYKL YMTEAWGWWG VVGMLAFAIV WQVTEMASDY WLSYETSGSI PFNPSLFIGV YVAIAAVSII LQVIKSLLET ILGLQTAQIF FKKMFDSILH
0801: APMSFFDTTP SGRILSRASS DQTTIDIVLS FFVGLTISMY ISVLSTIIVT CQVAWPSVIA VIPLVLLNIW YRNRYLATSR ELTRLEGVTK APVIDHFSET
0901: VLGATTIRCF KKDKEFFQEN LDRINSSLRM YFHNYAANEW LGFRLELIGT LVLAITAFLM ISLPSNFIKK EFVGMSLSYG LSLNSLVYFA ISISCMLEND
1001: MVAVERVNQF STLPSEAVWK IEDHLPSPNW PTHGDIDIDD LKVRYRPNTP LILKGITVSI SGGEKIGVVG RTGSGKSTLI QALFRLVEPV QGTMIIDGID
1101: ICTLGLHDLR SRFGIIPQEP VLFEGTIRSN IDPIGQYSDA EIWRALEGCQ LKDVVASKPQ KLDALVADSG ENWSVGQRQL LCLGRVILKR TRILFMDEAT
1201: ASVDSQTDAT IQKITRQEFS SCTIISIAHR IPTVMDCDRV LVLDAGLVKE FDSPSRLIEQ PSLFGAMVEE YANRSSNL
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.