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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • plasma membrane 4
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plasma membrane
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
nucleus: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH12057 Soybean endoplasmic reticulum 94.82 95.14
KRH31883 Soybean plastid 61.95 62.16
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 47.01 61.35
KRG96433 Soybean endoplasmic reticulum 60.96 61.04
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 55.51 60.93
Solyc01g080640.2.1 Tomato plastid 60.23 60.55
TraesCS2A01G056800.1 Wheat plasma membrane 38.51 58.47
TraesCS5A01G467600.1 Wheat plasma membrane 57.3 57.34
TraesCS5B01G479900.1 Wheat golgi 57.37 57.33
TraesCS5D01G480600.1 Wheat plasma membrane 57.1 57.1
KXG32483 Sorghum plasma membrane 57.3 57.08
Zm00001d009243_P001 Maize mitochondrion 56.97 56.86
Os04t0209200-01 Rice plasma membrane 47.68 56.18
Os01t0356400-01 Rice plasma membrane 55.38 54.62
HORVU2Hr1G009680.2 Barley plastid 38.58 52.44
EES10452 Sorghum plastid 52.59 51.13
TraesCS2B01G069000.2 Wheat plastid 51.79 50.95
Zm00001d004361_P001 Maize plasma membrane 51.79 50.78
Os04t0209300-01 Rice plasma membrane 49.93 49.74
TraesCSU01G014100.1 Wheat plasma membrane 48.94 49.0
TraesCS2A01G057100.1 Wheat plasma membrane 48.74 48.87
Zm00001d025043_P004 Maize plasma membrane, plastid 49.14 48.56
TraesCS2A01G056900.1 Wheat plasma membrane, plastid 47.94 48.55
HORVU2Hr1G009580.3 Barley plastid 42.23 43.06
KRG91620 Soybean plasma membrane 34.13 41.45
KRH73882 Soybean plasma membrane 35.46 41.33
KRG98556 Soybean nucleus 35.26 40.81
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 34.53 39.82
KRH19633 Soybean plasma membrane 38.58 38.3
KRH46325 Soybean plasma membrane 37.91 38.17
KRH67468 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.91 38.08
KRG99624 Soybean plasma membrane 37.58 38.04
KRH35194 Soybean endoplasmic reticulum, nucleus, plasma membrane 37.18 37.86
KRH46324 Soybean plasma membrane 37.72 37.79
KRH14256 Soybean plasma membrane 37.45 37.75
KRH46626 Soybean plasma membrane 36.59 37.71
KRG95750 Soybean plasma membrane 38.45 37.67
KRH73881 Soybean plasma membrane 37.18 37.51
KRH48930 Soybean endoplasmic reticulum 37.18 37.26
KRH08764 Soybean plasma membrane 35.72 36.33
KRH08755 Soybean plasma membrane 36.12 36.19
KRH66359 Soybean plasma membrane 36.45 36.07
KRH47149 Soybean plasma membrane 35.06 36.07
KRH58734 Soybean plasma membrane 34.2 35.47
KRH42626 Soybean plasma membrane 34.13 35.33
KRH73880 Soybean plasma membrane 28.22 34.64
KRH21096 Soybean endoplasmic reticulum 31.41 29.2
KRH11151 Soybean plasma membrane 31.27 29.07
KRH23646 Soybean plasma membrane 27.82 28.54
Protein Annotations
Gene3D:1.20.1560.10EntrezGene:100804807MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEMBL:ACUP02005414ncoils:CoilEnsemblPlantsGene:GLYMA_09G044500
GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085UniProt:I1L0Z7InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640EnsemblPlants:KRH37107ProteinID:KRH37107ProteinID:KRH37107.1InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF215
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0002338FDESEG:seg
Description
hypothetical protein
Coordinates
chr9:-:3800775..3811062
Molecular Weight (calculated)
168442.0 Da
IEP (calculated)
7.512
GRAVY (calculated)
0.192
Length
1506 amino acids
Sequence
(BLAST)
0001: MSSSFSPSWL TSPSCSALDI DSSSPTALLI VQWLRFILLS PCPQRVLLSA VDSIFLLSLL AFAAVKLYSR FTSNTTSNNT ITKPLLQEKD SDYKVTFWFK
0101: LPLLVTTLLA IAYTVLSILA FTQTSLSSWK LIEALFRLFQ AASNIVVAIL MAHEKKFKAS KHPLSLRIYW IANLMVSCLF ATSAIVRLIT IDVAKVELCL
0201: RVDDVFSLVN LPLSAFLFLV AMKGSTGIQV IRISDVVTTY QSLYSDRTLS PYAYSSFFSK TVWLWMNPLL NKGYQTPLKL EDVPSLPIDF RAEKMSELFH
0301: RNWPKPEENS KHPVGLTLFR CFWKHIAFTG FLAIIRLGVM YIGPMLIQSF VDFTSRKDST PYEGLVLILV LYLAKSTEVL SVHQFNFHSQ KLGMLIRSSL
0401: ITSIYKKGLR LSSSSRQAHG TGQIVNHMSV DAQQLADLMM QFHPIWLMPL QVTTALVLIY SNIGVSAFAA LLGSSIVFVF TLFRTKRTNS FQFMIMKSRD
0501: LRMKATNELL NNMRVIKFQA WEEYFGNKIG KFREAEHGWI GKFLYYFAVN MGVLSSAPLL VTVLTFGSAT LLGVPLNAGT VFTITSVIKI LQEPVRTFPQ
0601: ALIVISQAMI SLGRLDEFLM SKEMDEGAVE RVEGCNGSDT AVEIKDGEFS WDDVDGNAAL RVEEMEIKKG DHAAVVGAVG SGKSSLLASV LGEMFKISGK
0701: VRVCGSIAYV AQTSWIQNAT IQDNILFGLP MNREKYREAI RVCCLEKDLE MMEHRDQTEI GERGINLSGG QKQRVQLARA VYQDSDIYLL DDVFSAVDAQ
0801: TGSFIFKECI MGALKNKTII LVTHQVDFLH NVDCIMVMRE GKIVQSGKYD ELLKAGLDFG ALVAAHESSM EIAESSDRVG EDSAESPKLA RIPSKEKENV
0901: GEKQPQEESK SDKASAKLIE DEERETGRVD LKVYKHYFTE AFGWWGVALM LAMSLAWILS FLAGDYWLAI GTAEDSAFPP STFIIVYACI AGLVCTVVMI
1001: RSVLFTYWGL KTSQSFFSGM LESILHAPMS FFDTTPSGRI LSRVSTDILW VDISIPMLVN FVMVAYFSVT SILIVTCQNA WETVFLLIPL FWLNNWYRKY
1101: YLASSRELTR LDSITKAPVI HHFSETIAGV MTIRGFRKQN AFCQENIDKV NASLRMDFHN NGANEWLGFR LDYMGVIFLC FATIFMIFLP SAIIKPEYVG
1201: LSLSYGLALS SLLAFTISMT CSVENKMVSV ERIKQFSSLP SEAPWKIADK TPPQNWPSQG IIELTNLQVR YRPNTPLVLK GISLTIEAGE KIGVVGRTGS
1301: GKSTLIQVLF RLIEPSAGKI TVDGINICTL GLHDVRSRFG IIPQEPVLFQ GTVRSNIDPL GLYSEEEIWK SLERCQLKDV VAAKPEKLEA PVVDGGDNWS
1401: VGQRQLLCLG RIMLKSSKIL FMDEATASVD SQTDAVIQKI IREDFADRTI ISIAHRIPTV MDCDRVLVID AGYAKEYDKP SRLLERHSLF GALVKEYSNR
1501: SAELEA
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.