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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 5
  • endoplasmic reticulum 2
  • plasma membrane 3
  • extracellular 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane
Predotar:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31883 Soybean plastid 78.92 79.08
VIT_07s0005g00260.t01 Wine grape plasma membrane 64.23 75.76
CDY23680 Canola plasma membrane 62.83 70.47
Solyc09g075020.2.1 Tomato plastid 68.62 68.21
CDX76656 Canola plasma membrane, plastid 66.69 67.82
CDY11440 Canola plastid 66.76 67.61
PGSC0003DMT400029581 Potato plasma membrane 68.68 67.6
AT2G47800.1 Thale cress plasma membrane 68.02 67.48
Bra032248.1-P Field mustard plasma membrane, plastid 64.23 67.04
CDY43277 Canola plastid 66.62 66.89
CDX93660 Canola plastid 67.42 66.8
Bra018722.1-P Field mustard plasma membrane, plastid 67.35 66.73
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 51.0 66.46
Bra007695.1-P Field mustard plastid 67.35 65.91
AT3G62700.1 Thale cress plasma membrane 67.15 65.63
KRH12057 Soybean endoplasmic reticulum 61.37 61.49
TraesCS2A01G056800.1 Wheat plasma membrane 40.56 61.49
KRH37107 Soybean endoplasmic reticulum 61.04 60.96
KXG32483 Sorghum plasma membrane 61.17 60.85
Zm00001d009243_P001 Maize mitochondrion 60.51 60.3
TraesCS5A01G467600.1 Wheat plasma membrane 60.31 60.27
TraesCS5B01G479900.1 Wheat golgi 60.31 60.19
TraesCS5D01G480600.1 Wheat plasma membrane 60.24 60.16
Os04t0209200-01 Rice plasma membrane 49.73 58.53
Os01t0356400-01 Rice plasma membrane 57.51 56.65
HORVU2Hr1G009680.2 Barley plastid 40.62 55.14
TraesCS2B01G069000.2 Wheat plastid 53.46 52.51
EES10452 Sorghum plastid 53.39 51.84
Zm00001d004361_P001 Maize plasma membrane 52.59 51.5
TraesCS2A01G056900.1 Wheat plasma membrane, plastid 49.87 50.44
Os04t0209300-01 Rice plasma membrane 50.66 50.4
TraesCSU01G014100.1 Wheat plasma membrane 50.27 50.27
Zm00001d025043_P004 Maize plasma membrane, plastid 50.73 50.07
TraesCS2A01G057100.1 Wheat plasma membrane 49.2 49.27
HORVU2Hr1G009580.3 Barley plastid 43.75 44.55
KRH73882 Soybean plasma membrane 36.3 42.26
KRG91620 Soybean plasma membrane 34.18 41.45
KRG98556 Soybean nucleus 34.11 39.43
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 33.71 38.82
KRH46626 Soybean plasma membrane 37.57 38.67
KRG99624 Soybean plasma membrane 38.23 38.64
KRH46324 Soybean plasma membrane 38.16 38.19
KRH14256 Soybean plasma membrane 37.83 38.09
KRH48930 Soybean endoplasmic reticulum 37.97 37.99
KRH73881 Soybean plasma membrane 37.63 37.91
KRH35194 Soybean endoplasmic reticulum, nucleus, plasma membrane 37.23 37.86
KRH19633 Soybean plasma membrane 38.16 37.84
KRH46325 Soybean plasma membrane 37.43 37.63
KRG95750 Soybean plasma membrane 38.36 37.54
KRH67468 Soybean endoplasmic reticulum, plasma membrane, vacuole 38.3 37.43
KRH66359 Soybean plasma membrane 37.5 37.06
KRH08764 Soybean plasma membrane 36.17 36.73
KRH47149 Soybean plasma membrane 35.24 36.2
KRH42626 Soybean plasma membrane 34.97 36.15
KRH58734 Soybean plasma membrane 34.57 35.81
KRH08755 Soybean plasma membrane 35.57 35.6
KRH73880 Soybean plasma membrane 28.72 35.21
KRH21096 Soybean endoplasmic reticulum 31.58 29.32
KRH11151 Soybean plasma membrane 31.38 29.14
KRH23646 Soybean plasma membrane 27.39 28.07
Protein Annotations
Gene3D:1.20.1560.10EntrezGene:100808752MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEMBL:ACUP02012155ncoils:CoilEnsemblPlantsGene:GLYMA_19G210700
GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005774GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0042626GO:GO:0055085UniProt:I1NB55InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640EnsemblPlants:KRG96433ProteinID:KRG96433ProteinID:KRG96433.1InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF215
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000233E466SEG:seg
Description
hypothetical protein
Coordinates
chr19:+:46477740..46484323
Molecular Weight (calculated)
169771.0 Da
IEP (calculated)
7.704
GRAVY (calculated)
0.190
Length
1504 amino acids
Sequence
(BLAST)
0001: MSLASSSTWL TSLSCAFPEK QTSGYTFVST LLQWFEFIFL SPCPQRAILS FIDVVLLFFL FVFAVTKFWK RSTNLNEPLI RNNNNISIFL TTWFKLTLTV
0101: AILLTLVYTV ASVLAFSSSS EVPWNQVDEV FWLVQTITHA VLVVLIIHEK RFEAVKHPLL VRLYWIANFF VISLFAVSAV IRLVSVDVDG TINFKVNDVV
0201: SFISLPLSLF LLFVAVKGST GIVIPTEETR PLLEEETKLY DGGDETESEV TGFASASILS KAFWSWINPL LRKGYKSALK IDEIPTLSPE HRAERMSSIF
0301: ESKWPKSNER SKHPVRITLL RCFWKELAFN AFLAIIRLCV MFVGPVLIQS FVDFTSGKRS SEYEGYYLVL ILLVSKFIEV LATHHLNFQA QKLGTLLRST
0401: LIPSLYKKGL MLSFSARQDH GIGTIVNYMA VDTQQLSDMM LQFNAVWIMP FQVAIGMFLL YNCLGASSVT AFLGLLGVFV FAVIGTRRNN HFQYNVMRNR
0501: DSRMKAVNEM LNYMRVIKFQ AWEEHFSQRI MGFRETEYGW LSKLMFTICG NIVVMWSTPL LVSTITFGTA ILLGVQLDAA TVFTTTTVFK ILQEPIRTFP
0601: QSMISLSQAF ISLERLDRFM LSRELLGDSV EREEGCGGKT AVEIIDGTFS WDDDNMQQDL KNVNLEIKKG ELTAIVGTVG SGKSSLLASI LGEMRKISGK
0701: VRVCGNVAYV AQTSWIQNGT IEENILFGLP MDRRRYNEVI RVCCLEKDLE MMDYGDQTEI GERGINLSGG QKQRIQLARA VYQDCDIYLL DDVFSAVDAH
0801: TGSEIFKECV RGALKGKTII LVTHQVDFLH NVDQILVTRD GMIVQSGKYD ELLDSGMDFK ALVVAHETSM ALVEQGQGVV MPGENLNKPM KSPEARNSGE
0901: SNSLDRPVSS KKSSKLIKEE ERETGKVSLH IYKLYCTEAF GWWGITVVLI FSLLWQASMM ASDYWLAYET SEERAKMFNP SLFISIYAII TAVSIILVVI
1001: RSYIFTLLGL KTAQIFFTQI LRSILRAPMS FFDTTPSGRI LSRASTDQTN VDVLLPLFTG IVIAMYITVL SILIITCQNS WPTSFLIIPL IWLNIWYRGY
1101: YLATSRELTR LDSITKAPVI HHFSESIAGV MTIRSFRKQK NFCEENLKRV NDNLRMDFHN YSSNVWLGVR LELLGSFVFC ISAMFMIILP SSIIKPENVG
1201: LSLSYGLSLN ASLFWAVFMS CFIENKMVSV ERIKQFTNIP SEPAWNIKDR MPPSNWPSQG NVDIKDLQVR YRLNTPLVLK GITLSISGGE KVGVVGRTGS
1301: GKSTLIQVFF RLVEPSRGKI IIDGIDISAL GLHDLRSRFG IIPQEPVLFE GTIRSNIDPI GQYTDEEIWK SLERCQLKEV VATKPEKLDS LVVDNGENWS
1401: VGQRQLLCLG RVMLKRSRLL FMDEATASVD SQTDGVVQKI IREDFAACTI ISIAHRIPTV MDCDRVLVVD AGRAKEFDKP SNLLQRQSLF GALVQEYANR
1501: STEL
Best Arabidopsis Sequence Match ( AT2G47800.1 )
(BLAST)
0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
Arabidopsis Description
ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.