Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
18260611
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os06t0660200-01 | |
| Os11t0148300-01 | |
| Os12t0145500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28860.1 | Os11t0148300-01 | AT3G21640.1 | 14517332 |
| AT3G28860.1 | Os12t0145500-01 | AT3G21640.1 | 14517332 |
| AT3G28860.1 | Os06t0660200-01 | AT5G57090.1 | 17237354 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 95.39 | 95.17 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 95.0 | 93.95 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 94.04 | 93.67 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.88 | 93.59 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.73 | 93.43 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 93.73 | 93.13 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 80.38 | 89.8 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 41.7 | 85.78 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 84.99 | 85.67 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 84.91 | 85.52 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 84.67 | 85.28 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 84.35 | 85.03 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 84.35 | 85.03 |
| AT3G28860.1 | Thale cress | plasma membrane | 82.84 | 83.31 |
| Bra025359.1-P | Field mustard | plasma membrane | 82.37 | 82.83 |
| Bra039042.1-P | Field mustard | plasma membrane | 82.29 | 82.75 |
| CDY65012 | Canola | plasma membrane | 82.29 | 82.68 |
| CDX86408 | Canola | plasma membrane | 81.18 | 82.62 |
| CDY20012 | Canola | plasma membrane | 82.13 | 82.52 |
| CDY00109 | Canola | plasma membrane | 81.57 | 82.49 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 73.87 | 81.29 |
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 7.31 | 62.16 |
| Os01t0695800-01 | Rice | plasma membrane | 12.31 | 59.16 |
| Os02t0693700-02 | Rice | plasma membrane | 50.28 | 50.08 |
| Os05t0137200-01 | Rice | plasma membrane | 15.33 | 49.11 |
| Os08t0564300-04 | Rice | plasma membrane | 51.07 | 47.84 |
| Os02t0190300-01 | Rice | plasma membrane | 45.04 | 45.54 |
| Os02t0190000-00 | Rice | plasma membrane | 44.64 | 45.21 |
| Os02t0189800-00 | Rice | mitochondrion | 26.61 | 44.79 |
| Os01t0534700-00 | Rice | plasma membrane | 37.33 | 42.5 |
| Os05t0548500-00 | Rice | plasma membrane | 42.41 | 42.38 |
| Os05t0548300-01 | Rice | plasma membrane | 19.06 | 41.24 |
| Os03t0181750-00 | Rice | plasma membrane | 31.29 | 40.83 |
| Os01t0695700-00 | Rice | plasma membrane | 40.43 | 40.17 |
| Os04t0481700-01 | Rice | plasma membrane | 20.73 | 38.96 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 25.81 | 38.92 |
| Os03t0280000-01 | Rice | plasma membrane | 42.97 | 38.34 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 12.87 | 38.3 |
| Os01t0975900-02 | Rice | plasma membrane | 5.72 | 28.57 |
| Os03t0181675-00 | Rice | cytosol, nucleus, peroxisome, plastid | 9.37 | 20.24 |
| Os01t0976000-01 | Rice | nucleus | 1.99 | 4.41 |
Protein Annotations
| MapMan:11.2.4.3 | Gene3D:3.40.50.300 | EntrezGene:4336042 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:BAF14896.1 | ProteinID:BAS89528.1 | ProteinID:EEE61119.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os04g0459000 |
| EnsemblPlants:Os04t0459000-01 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | UniProt:Q0JCP1 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0000DD90F5 | RefSeq:XP_015633529.1 | SEG:seg | : |
Description
MULTIDRUG RESISTANCE 13Multidrug-resistance(MDR)-like ATP Binding Cassette B (ABCB) transporter, P-glyco-protein, Auxin transport, Iron homeostasis (Os04t0459000-01)
Coordinates
chr4:-:22914766..22921280
Molecular Weight (calculated)
136780.0 Da
IEP (calculated)
8.448
GRAVY (calculated)
0.147
Length
1259 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADESGSCGG GGGGGGGCEA VKKRVDQSVA FHELFGFADP LDWLLMAAGS AGAVVHGAAM PVFFLLFGEL INGFGKNQHS LRRMTDEVSK YSLYFVYLGL
0101: VVCASSYLEI ACWMYTGERQ VGALRRRYLE AVLRQDVGFF DTDARTGDVV FSVSTDTLLV QDAIGEKVGN FIHYLSTFLA GLVVGFVSAW RLALLSIAVI
0201: PGIAFAGGLY AYTLTGLTSK SRDSYANAGI IAEQAIAQVR TVYSYVGESK ALNSYSEAIQ NTLKLGYKAG MAKGLGIGCT YGIACMSWAL VFWYAGVFIR
0301: NGQTDGGKAF TAIFSAIVGG LSLGQSFSNL GAFSKGKIAG YKLLEVIRQR PTIVQDPADG RCLDEVHGNI EFKEVAFSYP SRPDVMIFRD FSLFFPAGKT
0401: AAVVGGSGSG KSTVVALIER FYDPNQGQVL LDNVDIKTLQ LKWLRDQIGL VNQEPALFAT TILENILYGK PDATMAEVEA AATSANAHSF IALLPNGYNT
0501: QVGERGLQLS GGQKQRIAIA RAMLKNPKIL LLDEATSALD AGSENIVQEA LDRLMVGRTT VVVAHRLSTI RCVDMIAVIQ QGQVVETGTH DELLAKGSSG
0601: AYAALIRFQE MARNRDFRGP STRKSRSSRL SNSLSTRSLS LRSGSLRNLS YSYSTGADGR IEMVSNADND RKYPAPKGYF FKLLKLNAPE WPYTILGAIG
0701: SILSGFIGPT FAIVMSNMIE VFYFRDPNAM ERKTREYVFI YIGTGLYAVV AYLVQHYFFS IMGENLTTRV RRMMLAAILR NDVGWFDQEE NNSSLVAARL
0801: STDAADVKSA IAERISVILQ NMTSLLVSFV VGFIIEWRVA VLILVTFPLL VLANFAQQLS MKGFAGDTAK AHAKTSMIAG EGVSNIRTVA AFNAQDKVLS
0901: LFCTELRVPQ MHSLRRSQIS GALFGLSQLS LYASEALILW YGAHLVRHHV STFSKVIKVF VVLVITANTV AETVSLAPEI VRGGESIRSV FAILNYRTRI
1001: DPDEPETEPV ESVRGDIDFR HVDFAYPSRP DVMVFKDFSL RIRAGQSQAL VGASGSGKST VIALIERFYD PLAGKVMIDG KDIRRLNVRS LRLKIGLVQQ
1101: EPVLFATSIF ENIAYGKDGA TEEEVIEAAK VANMHGFVSA LPEGYKTPVG ERGVQLSGGQ KQRIAIARAV LKDPAVLLLD EATSALDAES ECVLQEALER
1201: IMKGRTAVLV AHRLSTIRGV DSIAVVQDGR VVEQGSHGEL VSRPDGAYSR LLQLQLHHG
0101: VVCASSYLEI ACWMYTGERQ VGALRRRYLE AVLRQDVGFF DTDARTGDVV FSVSTDTLLV QDAIGEKVGN FIHYLSTFLA GLVVGFVSAW RLALLSIAVI
0201: PGIAFAGGLY AYTLTGLTSK SRDSYANAGI IAEQAIAQVR TVYSYVGESK ALNSYSEAIQ NTLKLGYKAG MAKGLGIGCT YGIACMSWAL VFWYAGVFIR
0301: NGQTDGGKAF TAIFSAIVGG LSLGQSFSNL GAFSKGKIAG YKLLEVIRQR PTIVQDPADG RCLDEVHGNI EFKEVAFSYP SRPDVMIFRD FSLFFPAGKT
0401: AAVVGGSGSG KSTVVALIER FYDPNQGQVL LDNVDIKTLQ LKWLRDQIGL VNQEPALFAT TILENILYGK PDATMAEVEA AATSANAHSF IALLPNGYNT
0501: QVGERGLQLS GGQKQRIAIA RAMLKNPKIL LLDEATSALD AGSENIVQEA LDRLMVGRTT VVVAHRLSTI RCVDMIAVIQ QGQVVETGTH DELLAKGSSG
0601: AYAALIRFQE MARNRDFRGP STRKSRSSRL SNSLSTRSLS LRSGSLRNLS YSYSTGADGR IEMVSNADND RKYPAPKGYF FKLLKLNAPE WPYTILGAIG
0701: SILSGFIGPT FAIVMSNMIE VFYFRDPNAM ERKTREYVFI YIGTGLYAVV AYLVQHYFFS IMGENLTTRV RRMMLAAILR NDVGWFDQEE NNSSLVAARL
0801: STDAADVKSA IAERISVILQ NMTSLLVSFV VGFIIEWRVA VLILVTFPLL VLANFAQQLS MKGFAGDTAK AHAKTSMIAG EGVSNIRTVA AFNAQDKVLS
0901: LFCTELRVPQ MHSLRRSQIS GALFGLSQLS LYASEALILW YGAHLVRHHV STFSKVIKVF VVLVITANTV AETVSLAPEI VRGGESIRSV FAILNYRTRI
1001: DPDEPETEPV ESVRGDIDFR HVDFAYPSRP DVMVFKDFSL RIRAGQSQAL VGASGSGKST VIALIERFYD PLAGKVMIDG KDIRRLNVRS LRLKIGLVQQ
1101: EPVLFATSIF ENIAYGKDGA TEEEVIEAAK VANMHGFVSA LPEGYKTPVG ERGVQLSGGQ KQRIAIARAV LKDPAVLLLD EATSALDAES ECVLQEALER
1201: IMKGRTAVLV AHRLSTIRGV DSIAVVQDGR VVEQGSHGEL VSRPDGAYSR LLQLQLHHG
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.