Factsheet for Os01t0975900-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

nucleus: 26035336
plasma membrane: 28056797

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0290700-01	Rice	cytosol, plasma membrane	5.56	9.46
Os01t0695800-01	Rice	plasma membrane	9.13	8.78
Os05t0137200-01	Rice	plasma membrane	11.51	7.38
Os05t0548300-01	Rice	plasma membrane	15.08	6.53
Os01t0695700-00	Rice	plasma membrane	29.37	5.84
Os04t0481700-01	Rice	plasma membrane	15.48	5.82
Os03t0181750-00	Rice	plasma membrane	22.22	5.8
Os02t0190000-00	Rice	plasma membrane	28.57	5.79
Os02t0189800-00	Rice	mitochondrion	17.06	5.75
Os04t0459000-01	Rice	plasma membrane	28.57	5.72
Os02t0190300-01	Rice	plasma membrane	28.17	5.7
Os02t0693700-02	Rice	plasma membrane	28.57	5.7
Os02t0323000-01	Rice	cytosol, peroxisome	9.52	5.67
Os01t0534700-00	Rice	plasma membrane	24.21	5.52
Os05t0548500-00	Rice	plasma membrane	26.98	5.4
Os08t0564300-04	Rice	plasma membrane	26.98	5.06
Os03t0280000-01	Rice	plasma membrane	26.19	4.68
Os04t0642000-01	Rice	cytosol, peroxisome, plasma membrane	11.11	4.58
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	13.89	4.19
CDY21871	Canola	endoplasmic reticulum, plasma membrane	1.19	4.17
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	4.76	2.06
Os01t0976000-01	Rice	nucleus	2.38	1.06

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:4324303	EMBL:AB114829	EMBL:AK111747	EMBL:AK111768
InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	ProteinID:BAB63833.1	ProteinID:BAF07476.1	ProteinID:BAS76466.1	ProteinID:EAZ15017.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0042807	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
EnsemblPlantsGene:Os01g0975900	EnsemblPlants:Os01t0975900-02	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF55	UniProt:Q94CS9	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000009EBCA	RefSeq:XP_015641156.1
SEG:seg	:	:	:	:	:

Description

TONOPLAST INTRINSIC PROTEIN 1;2Similar to Tonoplast membrane integral protein ZmTIP1-2. (Os01t0975900-01);Similar to Tonoplast membrane integral protein ZmTIP1-2. (Os01t0975900-02)

Coordinates

chr1:-:43115747..43117172

Molecular Weight (calculated)

25321.9 Da

IEP (calculated)

5.959

GRAVY (calculated)

0.923

Length

252 amino acids

Sequence
(BLAST)

001: MPVSRIAVGA PGELSHPDTA KAAVAEFISM LIFVFAGSGS GMAFSKLTDG GGTTPSGLIA ASLAHALALF VAVAVGANIS GGHVNPAVTF GAFVGGNISL
101: VKAVVYWVAQ LLGSVVACLL LKIATGGAAV GAFSLSAGVG AWNAVVFEIV MTFGLVYTVY ATAVDPKKGD LGVIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVT GVWDNHWVYW LGPFVGAAIA ALIYDIIFIG QRPHDQLPTA DY

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.