Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 77.07 | 28.32 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 77.54 | 28.23 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 78.01 | 26.32 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 51.06 | 25.87 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 28.37 | 22.02 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 47.52 | 20.62 |
| Bra017539.1-P | Field mustard | plasma membrane | 47.99 | 19.69 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 57.21 | 19.66 |
| Os01t0534700-00 | Rice | plasma membrane | 51.06 | 19.53 |
| Os02t0189800-00 | Rice | mitochondrion | 32.86 | 18.58 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 53.9 | 18.07 |
| Bra012621.1-P | Field mustard | plasma membrane | 52.96 | 17.96 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.43 | 17.95 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 53.43 | 17.95 |
| Solyc02g071350.2.1 | Tomato | plastid | 53.43 | 17.89 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 52.25 | 17.84 |
| KRH11119 | Soybean | plasma membrane | 52.01 | 17.64 |
| KRH21125 | Soybean | plasma membrane | 52.48 | 17.61 |
| AT4G18050.2 | Thale cress | plasma membrane | 50.83 | 17.26 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 51.3 | 17.15 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 50.83 | 17.02 |
| AT5G46540.1 | Thale cress | golgi | 49.65 | 16.83 |
| Os05t0548500-00 | Rice | plasma membrane | 48.46 | 16.27 |
| Os05t0548300-01 | Rice | plasma membrane | 21.99 | 15.98 |
| Os01t0695700-00 | Rice | plasma membrane | 47.75 | 15.94 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 37.12 | 14.39 |
| Os03t0181750-00 | Rice | plasma membrane | 31.91 | 13.99 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 19.39 | 13.4 |
| Os04t0459000-01 | Rice | plasma membrane | 38.3 | 12.87 |
| Os02t0190000-00 | Rice | plasma membrane | 37.59 | 12.79 |
| Os02t0190300-01 | Rice | plasma membrane | 37.35 | 12.69 |
| Os02t0693700-02 | Rice | plasma membrane | 34.04 | 11.39 |
| Os08t0564300-04 | Rice | plasma membrane | 33.1 | 10.42 |
| Os04t0481700-01 | Rice | plasma membrane | 15.84 | 10.0 |
| Os01t0975900-02 | Rice | plasma membrane | 5.67 | 9.52 |
| Os03t0280000-01 | Rice | plasma membrane | 30.97 | 9.28 |
| Os01t0976000-01 | Rice | nucleus | 1.42 | 1.06 |
| Os05t0137200-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os03t0181675-00 | Rice | cytosol, nucleus, peroxisome, plastid | 0.0 | 0.0 |
| Os01t0695800-01 | Rice | plasma membrane | 0.0 | 0.0 |
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| ProteinID:BAH91655.1 | ProteinID:BAS78391.1 | UniProt:C7IY55 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os02g0323000 | EnsemblPlants:Os02t0323000-01 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0001B65DAC | : | : | : |
Description
ABC TRANSPORTER B FAMILY MEMBER 10Similar to Felis catus multi-drug resistance related (Fragment). (Os02t0323000-01)
Coordinates
chr2:-:12923864..12927803
Molecular Weight (calculated)
46225.7 Da
IEP (calculated)
8.595
GRAVY (calculated)
0.053
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: KDASEEEIRR AIVLANAAKF IDKLPNGLDT MVGEHGTQLS GGQKQRIAIA RAILKDPRIL LLDEATSALD AESEHVVQDA LNNIMVNRTT IIVAHRLSTV
101: RNADTISVLH RGQLVEQGPH AELIKYSNGA YYQLLQLQEV NARRNGTYEL DPNRLSDVAN RLSDVANRLS DAANRLSDAG NFVSRHSIRK LSFERSMSRH
201: SSLGGSRRNS QTYALTEDEI EGCDDTKSGK NVLRRLLHLH KPETAILLLG CIAASANGAI LPVFGLLLSS AINAFYEPPH KLRKDSVFWA EIYVILGVVS
301: IFIIPVQHTL FNMAGGKLIE RIRALSFSRV VYQDIGWFDD PLNSSGAIGA RLSADAASVK SIAGDVLSLI VQSISTALVG IVIAMIANWK LAFIVLCFVP
401: CVFAQSYAQS RLMRGFGADA KDV
101: RNADTISVLH RGQLVEQGPH AELIKYSNGA YYQLLQLQEV NARRNGTYEL DPNRLSDVAN RLSDVANRLS DAANRLSDAG NFVSRHSIRK LSFERSMSRH
201: SSLGGSRRNS QTYALTEDEI EGCDDTKSGK NVLRRLLHLH KPETAILLLG CIAASANGAI LPVFGLLLSS AINAFYEPPH KLRKDSVFWA EIYVILGVVS
301: IFIIPVQHTL FNMAGGKLIE RIRALSFSRV VYQDIGWFDD PLNSSGAIGA RLSADAASVK SIAGDVLSLI VQSISTALVG IVIAMIANWK LAFIVLCFVP
401: CVFAQSYAQS RLMRGFGADA KDV
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.