Factsheet for VIT_10s0003g02570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g02540.t01	Wine grape	plasma membrane	76.35	76.85
VIT_10s0003g02580.t01	Wine grape	plasma membrane	75.63	74.07
TraesCS6B01G145800.1	Wheat	cytosol	14.93	73.12
Os01t0695800-01	Rice	plasma membrane	15.42	72.9
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	31.72	72.11
KRH21125	Soybean	plasma membrane	72.64	71.37
Bra012621.1-P	Field mustard	plasma membrane	71.83	71.37
Solyc02g071350.2.1	Tomato	plastid	71.43	70.07
KRH11119	Soybean	plasma membrane	70.38	69.93
PGSC0003DMT400007960	Potato	plasma membrane	71.19	69.89
AT4G18050.2	Thale cress	plasma membrane	69.98	69.58
CDY35168	Canola	golgi, peroxisome, plasma membrane	60.37	68.56
AT5G46540.1	Thale cress	golgi	65.94	65.46
Solyc02g071340.1.1	Tomato	plasma membrane	66.1	64.85
Bra017539.1-P	Field mustard	plasma membrane	53.27	64.02
PGSC0003DMT400034908	Potato	plasma membrane	64.89	63.86
GSMUA_Achr2P20180_001	Banana	plasma membrane	50.2	63.79
Solyc03g005860.2.1	Tomato	plasma membrane	64.16	63.15
Os05t0548300-01	Rice	plasma membrane	29.62	63.06
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	58.03	62.47
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	65.29	62.37
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.73	61.98
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	58.11	61.96
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	45.36	61.83
TraesCS3A01G257500.1	Wheat	plasma membrane	61.34	60.46
TraesCS3D01G257500.1	Wheat	plasma membrane	61.26	60.43
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	60.77	60.05
TraesCS3B01G290300.2	Wheat	peroxisome	61.34	59.98
KXG33192	Sorghum	cytosol	61.1	59.65
Zm00001d043762_P001	Maize	cytosol	61.18	59.54
HORVU2Hr1G001630.2	Barley	plasma membrane	59.64	58.88
HORVU2Hr1G001530.10	Barley	plasma membrane	59.64	58.88
TraesCS3D01G258100.1	Wheat	plasma membrane	59.4	58.88
TraesCS3A01G258200.1	Wheat	peroxisome	59.24	58.72
TraesCS2B01G012300.1	Wheat	plasma membrane	59.4	58.51
TraesCS3D01G257900.1	Wheat	peroxisome	59.48	58.4
TraesCS2A01G009900.1	Wheat	plasma membrane	59.08	58.19
KXG35311	Sorghum	plasma membrane	58.92	58.17
Os05t0548500-00	Rice	plasma membrane	59.08	58.1
TraesCS2D01G010500.1	Wheat	plasma membrane	58.76	57.87
HORVU3Hr1G065280.1	Barley	plasma membrane	58.92	57.84
HORVU3Hr1G065320.47	Barley	plasma membrane	59.4	57.82
Zm00001d005528_P001	Maize	plasma membrane	56.09	57.77
TraesCS2D01G010400.1	Wheat	plasma membrane	58.19	57.54
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	59.32	57.47
TraesCS6B01G145600.1	Wheat	peroxisome	58.6	57.44
TraesCS3A01G369700.1	Wheat	peroxisome	59.24	57.34
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	59.08	57.28
Os01t0534700-00	Rice	plasma membrane	51.09	57.23
HORVU6Hr1G021320.43	Barley	peroxisome	58.43	57.23
TraesCS2B01G012100.3	Wheat	plasma membrane	57.71	57.06
Zm00001d009447_P002	Maize	plasma membrane	58.19	57.04
KXG32655	Sorghum	peroxisome	59.16	56.78
TraesCS2A01G009600.1	Wheat	plasma membrane	57.38	56.74
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	38.18	56.65
Os01t0695700-00	Rice	plasma membrane	57.71	56.43
TraesCS1B01G387400.1	Wheat	peroxisome	57.55	56.36
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	57.47	56.33
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	57.38	56.21
EES01319	Sorghum	cytosol	57.71	56.12
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	57.47	56.11
Zm00001d011644_P002	Maize	plasma membrane	58.11	56.03
TraesCS3B01G291100.3	Wheat	peroxisome	57.14	56.01
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	57.14	55.97
HORVU1Hr1G078450.24	Barley	plasma membrane	57.14	55.97
TraesCS3B01G291000.1	Wheat	peroxisome	56.74	55.88
TraesCS3A01G258400.3	Wheat	peroxisome	56.74	55.88
TraesCS3D01G258200.2	Wheat	peroxisome	56.74	55.84
TraesCS2B01G012200.1	Wheat	golgi	48.59	55.79
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	59.48	55.71
HORVU3Hr1G065240.14	Barley	cytosol	57.3	55.47
Zm00001d043766_P005	Maize	cytosol	56.98	55.24
TraesCS3A01G258000.1	Wheat	mitochondrion	59.08	55.2
TraesCS5A01G495900.1	Wheat	plasma membrane	56.42	55.17
TraesCS3B01G290700.1	Wheat	peroxisome	45.92	54.29
Os02t0323000-01	Rice	cytosol, peroxisome	17.84	52.25
VIT_02s0012g01660.t01	Wine grape	plasma membrane	43.58	43.44
VIT_14s0108g00430.t01	Wine grape	cytosol, peroxisome, plasma membrane	43.66	43.28
VIT_14s0066g02320.t01	Wine grape	peroxisome	40.19	43.04
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	41.97	42.62
VIT_19s0085g00060.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	41.08	41.55
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	39.95	40.41
VIT_01s0137g00350.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	40.11	39.7
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.78	39.14
OQU78384	Sorghum	plasma membrane	58.92	38.71
VIT_17s0000g09760.t01	Wine grape	plasma membrane	36.97	38.26
VIT_16s0098g00570.t01	Wine grape	cytosol, plasma membrane, vacuole	36.32	37.88
VIT_13s0019g00310.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	36.48	34.77
VIT_06s0004g04100.t01	Wine grape	cytosol	37.77	33.31
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	40.36	31.71

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EMBL:AM454737	ProteinID:CAN72232	ProteinID:CAN72232.1	ProteinID:CCB55752	ProteinID:CCB55752.1
UniProt:F6HMG3	EMBL:FN595992	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF398	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0002108B11	ArrayExpress:VIT_10s0003g02570	EnsemblPlantsGene:VIT_10s0003g02570	EnsemblPlants:VIT_10s0003g02570.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:4527597..4532707

Molecular Weight (calculated)

134101.0 Da

IEP (calculated)

7.978

GRAVY (calculated)

0.165

Length

1239 amino acids

Sequence
(BLAST)

0001: MNKDGGETTA KRLDQQKVTL YKLFSFADQS DVVLMTVGTI SGMANGCSRP LMTVMLGKTI NKFGSTDQSQ IQVVHVELGV FLLVLLYLAV ASGIAGFLQT
0101: SSWMVTGARQ ANRIRSLYLD TILRQDIGFF DTETTTGEVI GRMSGDTILI QDAMGEKVGK FIQLVSNFIG AFVFAFIIGW RLTLVLLPTV PLIIIAGAAM
0201: AAVISKMSSY GQVAYAEAGN VVEQTIGAIR TVAAFTGEKH AMEKYNRRLK VAYAATVKQG LASGFGVGVA LLIVFLSYAL AIWYGSKLII EKGYDGGKIV
0301: NVLFCVIGGG MALGQASPCL SAFGAGQAAA YKMFETIKRK PKINAYDTNG VVLEEIMGEI ELKDVYFKYP ARPEVQIFSG FSLNIPSGTT AALVGQSGSG
0401: KSTVISLLER FYDPEAGEVL IDGVNLKKIN LRWIRGKIGL VSQEPILFAA TIKENISYGK EKATDEEIRT AIKLANAAKF IDKMPTGLDT MVGEHGTQLS
0501: GGQKQRIAIA RAILKNPRIL LLDEATSALD AESERIVQDA LQNIMVNRTT VIVAHRLTTI RNADNIAVVH QGKIVEQGTH MELIRDPDGA YSQLVRLQEG
0601: HNQVEDAQSR VNSPSVHHSY SLSSGIPDPT GIIEMEFGGK ESSTTQGEAE NRKRRKVSLI RLAYLNKPET PVLLLGSIAA GFHGIIYPVF GLLISTAIKI
0701: FYEPPNELKK DSRVWAFMFI GLGVLAFIAL PLQNYLFGIA GGKLIQRICS LSFEKVVHQE ISWFDDPANS SGSVGARLST DASTVRSLVG DTLALVVQNL
0801: VTVAAGLVIS FTANWILALI ILAVLPLMGF QGYLQTRFLK GFSADAKVMY EEASQVANDA VSSIRTVASF CAEKKVMEMY QQKCEGPMKH GVRLGLVSGA
0901: GLGFSFFSTY CTNAFCFYIG AVLVQHGKAT FSEVFKVYFA LTFLALAISE ATAMAPDTNK AKDSTASIFE LLDSKPKIDS SSNEGTTLSI VKGDIELQNV
1001: SFRYSTRPDV QIFRDLCLSI PSGKTVALVG ESGSGKSTVI SLLERFYNPD SGHILLDGME IQKFKLSWLR QQMGLVNQEP ALFNETIRAN IAYGKQGEAA
1101: EEEIIAATRA ANAHNFISAL PQGYDTSVGE RGLQLSGGQK QRIAIARAIL KDPRILLLDE ATSALDAESE RVVQDALDRV MVDRTTVVVA HRLTTIKGAD
1201: VIAVVKNGEI AEKGTHDVLM DIRHGAYASL VALHMASST

Best Arabidopsis Sequence Match ( AT4G18050.2 )
(BLAST)

0001: MKKEEERKER MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV
0101: AFLQVSCWMV TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI
0201: AGAAMSLIMS KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN
0301: GGQVINVIFA VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG
0401: QSGSGKSTVI SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH
0501: GTQMSGGQKQ RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV
0601: RLQEGSKEEA TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS
0701: IAAMVHGTVF PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA
0801: LALIVQNIAT VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV
0901: RLGLLSGAGF GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN
1001: GDIEFRHVSF RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA
1101: YGKTGGATEE EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR
1201: LTTIKNADVI AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.