Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043762_P001 | Maize | cytosol | 95.51 | 95.21 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 84.87 | 85.68 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 84.71 | 85.59 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 84.87 | 85.0 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 78.64 | 79.52 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 78.64 | 79.52 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 78.41 | 79.09 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 78.25 | 78.93 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 78.25 | 78.93 |
| TraesCS2A01G009600.1 | Wheat | plasma membrane | 75.73 | 76.7 |
| TraesCS2B01G012200.1 | Wheat | golgi | 65.17 | 76.64 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 75.65 | 76.62 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 75.18 | 76.14 |
| EES01319 | Sorghum | cytosol | 67.69 | 67.43 |
| KXG35311 | Sorghum | plasma membrane | 63.59 | 64.3 |
| KXG32655 | Sorghum | peroxisome | 65.17 | 64.06 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 61.78 | 63.69 |
| Bra012621.1-P | Field mustard | plasma membrane | 61.94 | 63.03 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 48.15 | 62.67 |
| KRH21125 | Soybean | plasma membrane | 61.07 | 61.46 |
| AT4G18050.2 | Thale cress | plasma membrane | 60.28 | 61.4 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 60.99 | 61.33 |
| KRH11119 | Soybean | plasma membrane | 60.2 | 61.27 |
| Solyc02g071350.2.1 | Tomato | plastid | 60.84 | 61.12 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 59.65 | 61.1 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 54.93 | 60.4 |
| KXG32330 | Sorghum | plastid | 60.6 | 60.08 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 59.18 | 59.37 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 58.71 | 58.99 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 50.67 | 58.94 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.22 | 58.72 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 57.37 | 57.82 |
| AT5G46540.1 | Thale cress | golgi | 56.03 | 56.97 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 56.34 | 56.79 |
| Bra017539.1-P | Field mustard | plasma membrane | 43.34 | 53.35 |
| OQU78384 | Sorghum | plasma membrane | 70.37 | 47.35 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 43.81 | 43.92 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 42.87 | 43.11 |
| OQU84543 | Sorghum | endoplasmic reticulum, plasma membrane | 41.69 | 42.8 |
| EES05688 | Sorghum | plasma membrane | 42.16 | 42.46 |
| EES05229 | Sorghum | plasma membrane | 39.4 | 40.19 |
| OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 37.35 | 37.62 |
| OQU79903 | Sorghum | peroxisome | 37.04 | 37.1 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 38.53 | 34.9 |
| EER92449 | Sorghum | plasma membrane | 37.83 | 33.97 |
| OQU80682 | Sorghum | plasma membrane | 41.21 | 33.94 |
| KXG25805 | Sorghum | peroxisome, plastid | 37.59 | 30.81 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1B6Q5J0 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlants:KXG33192 | ProteinID:KXG33192 | ProteinID:KXG33192.1 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | EnsemblPlantsGene:SORBI_3003G267700 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI00081AD898 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:60421757..60428660
Molecular Weight (calculated)
137324.0 Da
IEP (calculated)
6.774
GRAVY (calculated)
0.076
Length
1269 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEAAGGAKGR DGVEKKEEEN GNGHGGGDAV KKVPFTGLFR YADGTDVLLM LLGTVGSVAN GVSQPVMTLI FGQVINAFGD ATTDDVLRRV NQAVLNFVYL
0101: GIATAVVSFL QVSCWTMTGE RQATRIRSLY LKSVLRQEIA FFDVEMTTGQ IVSRMSGDTV LVQDAIGEKV GKFQQLVATF VGGFVIAFVK GWLLSLVMLA
0201: CIPPVVIAGG IVSKMLAKIS TKGQASYSDA GNIVEQTLGS IKTVVSFNGE KQAIALYNKL IHKSYKAAVE EGITNGFGMG SVFFIFFSSY GLAIWYGGKL
0301: ILSKGYSGGD IINILFAIMT GAMSLGNATP CMAAFAGGQS AAYRLFTTIK RKPEIDPDDP TGKQLEDIKG DVDLNDVYFS YPARPEQLVF DGFSLHVSSG
0401: TTMAIVGESG SGKSTVISLV ERFYDPQAGE VLIDGINIKS LQLDWIRGKI GLVNQEPLLF MTSIKDNITY GKEDATIEEI KRAAELANAA NFIDKLPNGY
0501: DTMVGQRGAQ LSGGQKQRIA IARAIIKNPR ILLLDEATSA LDVESERIVQ EALNRIMLDR TTLVVAHRLS TVRNADCISV VQQGKIVEQG PHDELIMNPD
0601: GAYSQLIRLQ ESKEEEQKLD HHMSDSRSKS RSLSLKRSIS RGSAGNSSRH SLTLPFGMPG SVELLEGNDA NWEDEKDQAR DGEAPKKAPM GRLASLNKPE
0701: VPILLLGSLA AGVHGVLFPM FGLMISNAIK TFYEPPHQLK KDASFWGLMC VVLGIVSILS IPVEYFLFGI AGGKLIERVR AMSFRSIVHQ EVAWFDDPKN
0801: SSGALGARLS VDALNVRRLV GDNLALAVQV ISTLIAGFVI AFVADWKLTL IILCVMPLSG VQGYAQVKFL KGFSEDAKIL YEDASQVATD AVSSIRTVAS
0901: FSAEKRVTTI YEDKCEASKK QGVRTGMVGG LGFGFSFLMM YLTYGLCFYV GAQFVRHNKS TFGDVFKVFF ALMLATIGIS QTSALASDST KAKDSAVSIF
1001: ALLDRKSKID SSNDEGSTLH EVKGDIDFRH VSFKYPSRPD IQIFSDFTLH IPAGKTVALV GESGSGKSTV ISLLERFYNP DSGTISLDGV EIKSLKVTWL
1101: RDQMGLVSQE PILFNDTIRA NIAYGKHGEV TEEELIKAAK AANAHEFVSS LPQGYDTTVG ERGVQLSGGQ KQRVAIARAI LKDPRILLLD EATSALDAES
1201: ERIVQDALDH VMVGRTTVIV AHRLSTIKSA DIIAVLKDGV IVEKGRHEAL MNIKDGFYAS LVELRSASS
0101: GIATAVVSFL QVSCWTMTGE RQATRIRSLY LKSVLRQEIA FFDVEMTTGQ IVSRMSGDTV LVQDAIGEKV GKFQQLVATF VGGFVIAFVK GWLLSLVMLA
0201: CIPPVVIAGG IVSKMLAKIS TKGQASYSDA GNIVEQTLGS IKTVVSFNGE KQAIALYNKL IHKSYKAAVE EGITNGFGMG SVFFIFFSSY GLAIWYGGKL
0301: ILSKGYSGGD IINILFAIMT GAMSLGNATP CMAAFAGGQS AAYRLFTTIK RKPEIDPDDP TGKQLEDIKG DVDLNDVYFS YPARPEQLVF DGFSLHVSSG
0401: TTMAIVGESG SGKSTVISLV ERFYDPQAGE VLIDGINIKS LQLDWIRGKI GLVNQEPLLF MTSIKDNITY GKEDATIEEI KRAAELANAA NFIDKLPNGY
0501: DTMVGQRGAQ LSGGQKQRIA IARAIIKNPR ILLLDEATSA LDVESERIVQ EALNRIMLDR TTLVVAHRLS TVRNADCISV VQQGKIVEQG PHDELIMNPD
0601: GAYSQLIRLQ ESKEEEQKLD HHMSDSRSKS RSLSLKRSIS RGSAGNSSRH SLTLPFGMPG SVELLEGNDA NWEDEKDQAR DGEAPKKAPM GRLASLNKPE
0701: VPILLLGSLA AGVHGVLFPM FGLMISNAIK TFYEPPHQLK KDASFWGLMC VVLGIVSILS IPVEYFLFGI AGGKLIERVR AMSFRSIVHQ EVAWFDDPKN
0801: SSGALGARLS VDALNVRRLV GDNLALAVQV ISTLIAGFVI AFVADWKLTL IILCVMPLSG VQGYAQVKFL KGFSEDAKIL YEDASQVATD AVSSIRTVAS
0901: FSAEKRVTTI YEDKCEASKK QGVRTGMVGG LGFGFSFLMM YLTYGLCFYV GAQFVRHNKS TFGDVFKVFF ALMLATIGIS QTSALASDST KAKDSAVSIF
1001: ALLDRKSKID SSNDEGSTLH EVKGDIDFRH VSFKYPSRPD IQIFSDFTLH IPAGKTVALV GESGSGKSTV ISLLERFYNP DSGTISLDGV EIKSLKVTWL
1101: RDQMGLVSQE PILFNDTIRA NIAYGKHGEV TEEELIKAAK AANAHEFVSS LPQGYDTTVG ERGVQLSGGQ KQRVAIARAI LKDPRILLLD EATSALDAES
1201: ERIVQDALDH VMVGRTTVIV AHRLSTIKSA DIIAVLKDGV IVEKGRHEAL MNIKDGFYAS LVELRSASS
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.