Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 97.43 | 97.15 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 93.93 | 93.93 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 94.15 | 93.75 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 93.79 | 93.19 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 78.23 | 87.54 |
| HORVU3Hr1G117180.10 | Barley | plastid | 86.94 | 85.47 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 75.95 | 81.85 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 75.02 | 81.79 |
| EER92449 | Sorghum | plasma membrane | 81.94 | 81.25 |
| KRH70512 | Soybean | extracellular | 80.59 | 80.53 |
| KRG92957 | Soybean | nucleus | 80.16 | 80.27 |
| KRH01590 | Soybean | mitochondrion | 80.09 | 80.03 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 79.87 | 79.99 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 79.23 | 79.0 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 78.44 | 78.5 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 78.16 | 78.49 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 78.87 | 78.48 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 78.3 | 78.36 |
| CDY65312 | Canola | cytosol | 78.23 | 78.34 |
| CDY07647 | Canola | cytosol | 78.16 | 78.16 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 78.09 | 77.98 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 77.87 | 77.87 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 78.02 | 77.68 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 78.02 | 77.63 |
| Bra005036.1-P | Field mustard | mitochondrion | 77.94 | 77.56 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 38.83 | 43.11 |
| EES05688 | Sorghum | plasma membrane | 38.04 | 42.3 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 38.12 | 42.18 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 32.33 | 39.25 |
| OQU84543 | Sorghum | endoplasmic reticulum, plasma membrane | 34.26 | 38.84 |
| KXG33192 | Sorghum | cytosol | 34.9 | 38.53 |
| KXG32330 | Sorghum | plastid | 35.19 | 38.52 |
| EES05229 | Sorghum | plasma membrane | 33.33 | 37.54 |
| KXG35311 | Sorghum | plasma membrane | 33.26 | 37.13 |
| EES01319 | Sorghum | cytosol | 33.48 | 36.81 |
| KXG32655 | Sorghum | peroxisome | 33.69 | 36.56 |
| OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 32.69 | 36.35 |
| OQU79903 | Sorghum | peroxisome | 31.62 | 34.96 |
| OQU80682 | Sorghum | plasma membrane | 37.54 | 34.13 |
| KXG25805 | Sorghum | peroxisome, plastid | 31.26 | 28.29 |
| OQU78384 | Sorghum | plasma membrane | 34.48 | 25.61 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1B6Q8I7 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlants:KXG34231 | ProteinID:KXG34231 | ProteinID:KXG34231.1 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 |
| SMART:SM00382 | EnsemblPlantsGene:SORBI_3003G445500 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI00081AC66D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:74327113..74336193
Molecular Weight (calculated)
154549.0 Da
IEP (calculated)
6.868
GRAVY (calculated)
0.087
Length
1401 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSRGLFGWS PPHVQPLTPV SETSEPPESP SPYAADLGLG GDGAPPPDDD AQPPLDDADD DPDPPPAAVP FKRLFACADR IDWALMVAGS LAAAAHGVAL
0101: VVYLHLFGKA INSLHAHGRH THDLFHNINQ HALYFLYIAI GVFFAGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFFG GLVIGLVNCW QIALLTLATG PFIVAAGGIS NIFLHRLAEN IQDAYGEAAS IAEQAILYIR TLYSFTNETL AKYSYATSLQ
0301: ATLRYGILIS LVQGLGLGFT YGLAICSCAL QLWVGRFLIS HGRANGGEVV VALFAIILSG LGLNQAATNF YSFEQGRIAA YRLYEMISRS TSTVNQDGRT
0401: LSSVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPARKTVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: MENIAYGRSA TTDQIEEAAK TAHVHAFISS LEKGYETQVG RAGLSLTEEQ KIKLSIARAV LSNPSILLLD EVTGALDFEA EKAVQEALDI LMLGRSTIII
0601: ARRLSLIRNA DYIAVMEEGQ LVEMGTHEEL LNLDGLYAEL LRCEEAAKLP KRTPIRNYKE PSSFQIERDS SASHSFQESS SPKMSKSPSL QKTHGFLTFR
0701: TSDANHNSRE SPNIQSPPSE QMAEARLPMV ASERAPSIKR QDSFEMKLPD LPKIDVPLHR QSSNTSDPES PISPLLTSDP KNERSHSKTF SRPLDIFDSF
0801: HADDSKQQHT KAPSFWRLAE LSLAEYFYAL LGSAGAACFG SFNPLLAYTI SLIVVAYYKI GVRDVHAEVN KYCSFIVGMG IITVLANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAILRNEVGW FDDEENSADI LSMRLANDAT FVRAAFSNRL SIFIQDTSAI LVALLLGMLL QWRVALVALA TLPILIVSAV AQKMWLSGFS
1001: RGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKIMELYRLQ LGNILKKSFI HGMGIGFAFG FSQFLLFACN ALLLWYTAAA VKDGHLSLVT AVKEYIVFSF
1101: ASFALVEPFG LAPYILKRRK SLTSVFEIID RVPKIDPDDA SGLKPPNVYG SIEFRSVDFC YPTRPEMMVL SNFSLRVNGG QTVAVVGVSG SGKSTIISLI
1201: ERFYDPTAGQ VLLDGRDLKL FNLRWLRSHM GLVPQDPVIF STTIRENIIY ARHNATESEM KEAARIANAH HFISSLPHGY DTHVGMRGVD LTPGQKQRIA
1301: IARVVLKNAP ILLLDEASSA IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMKHVDSIV VLNGGRIVEQ GSHDSLVQLN GLYVKLMQPH FSKGFRQRRL
1401: I
0101: VVYLHLFGKA INSLHAHGRH THDLFHNINQ HALYFLYIAI GVFFAGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFFG GLVIGLVNCW QIALLTLATG PFIVAAGGIS NIFLHRLAEN IQDAYGEAAS IAEQAILYIR TLYSFTNETL AKYSYATSLQ
0301: ATLRYGILIS LVQGLGLGFT YGLAICSCAL QLWVGRFLIS HGRANGGEVV VALFAIILSG LGLNQAATNF YSFEQGRIAA YRLYEMISRS TSTVNQDGRT
0401: LSSVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPARKTVA LVGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: MENIAYGRSA TTDQIEEAAK TAHVHAFISS LEKGYETQVG RAGLSLTEEQ KIKLSIARAV LSNPSILLLD EVTGALDFEA EKAVQEALDI LMLGRSTIII
0601: ARRLSLIRNA DYIAVMEEGQ LVEMGTHEEL LNLDGLYAEL LRCEEAAKLP KRTPIRNYKE PSSFQIERDS SASHSFQESS SPKMSKSPSL QKTHGFLTFR
0701: TSDANHNSRE SPNIQSPPSE QMAEARLPMV ASERAPSIKR QDSFEMKLPD LPKIDVPLHR QSSNTSDPES PISPLLTSDP KNERSHSKTF SRPLDIFDSF
0801: HADDSKQQHT KAPSFWRLAE LSLAEYFYAL LGSAGAACFG SFNPLLAYTI SLIVVAYYKI GVRDVHAEVN KYCSFIVGMG IITVLANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAILRNEVGW FDDEENSADI LSMRLANDAT FVRAAFSNRL SIFIQDTSAI LVALLLGMLL QWRVALVALA TLPILIVSAV AQKMWLSGFS
1001: RGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKIMELYRLQ LGNILKKSFI HGMGIGFAFG FSQFLLFACN ALLLWYTAAA VKDGHLSLVT AVKEYIVFSF
1101: ASFALVEPFG LAPYILKRRK SLTSVFEIID RVPKIDPDDA SGLKPPNVYG SIEFRSVDFC YPTRPEMMVL SNFSLRVNGG QTVAVVGVSG SGKSTIISLI
1201: ERFYDPTAGQ VLLDGRDLKL FNLRWLRSHM GLVPQDPVIF STTIRENIIY ARHNATESEM KEAARIANAH HFISSLPHGY DTHVGMRGVD LTPGQKQRIA
1301: IARVVLKNAP ILLLDEASSA IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMKHVDSIV VLNGGRIVEQ GSHDSLVQLN GLYVKLMQPH FSKGFRQRRL
1401: I
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.