Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 98.93 | 98.44 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 95.15 | 95.56 |
| CDY07647 | Canola | cytosol | 95.36 | 95.36 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 94.43 | 94.03 |
| CDY65312 | Canola | cytosol | 89.22 | 89.35 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 89.15 | 89.21 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 6.85 | 86.49 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 79.44 | 85.62 |
| KRH01590 | Soybean | mitochondrion | 84.87 | 84.81 |
| KRG92957 | Soybean | nucleus | 84.65 | 84.77 |
| KRH70512 | Soybean | extracellular | 84.65 | 84.59 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 77.59 | 84.59 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 84.44 | 84.56 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 74.8 | 83.71 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 77.94 | 77.94 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 77.87 | 77.87 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 78.02 | 77.68 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 77.73 | 77.23 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 77.09 | 77.2 |
| Os03t0280000-01 | Rice | plasma membrane | 77.73 | 77.18 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 77.52 | 77.08 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 77.44 | 77.0 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 77.3 | 76.86 |
| Zm00001d047780_P002 | Maize | plasma membrane | 77.52 | 76.86 |
| EER92449 | Sorghum | plasma membrane | 77.52 | 76.86 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 77.02 | 76.8 |
| CDX84897 | Canola | cytosol | 4.0 | 47.46 |
| CDX86437 | Canola | cytosol | 4.85 | 45.64 |
| CDX93393 | Canola | plasma membrane | 36.55 | 41.8 |
| CDY00109 | Canola | plasma membrane | 37.05 | 41.69 |
| CDX86408 | Canola | plasma membrane | 36.76 | 41.63 |
| CDY37953 | Canola | plasma membrane | 36.4 | 41.63 |
| CDY20012 | Canola | plasma membrane | 37.12 | 41.5 |
| CDX94395 | Canola | plasma membrane | 36.55 | 41.49 |
| CDY27639 | Canola | plasma membrane | 35.97 | 41.38 |
| CDX92739 | Canola | plasma membrane | 36.55 | 41.26 |
| CDY65012 | Canola | plasma membrane | 36.76 | 41.1 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 32.91 | 40.62 |
| CDX89380 | Canola | plasma membrane | 36.55 | 40.16 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 37.83 | 39.61 |
| CDX79704 | Canola | plasma membrane | 37.9 | 39.6 |
| CDY25095 | Canola | cytosol | 33.76 | 39.22 |
| CDX67881 | Canola | cytosol | 33.55 | 39.13 |
| CDY27510 | Canola | cytosol | 33.33 | 38.95 |
| CDX80072 | Canola | cytosol | 33.26 | 38.9 |
| CDY48003 | Canola | cytosol | 33.05 | 38.84 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 34.19 | 38.54 |
| CDX84896 | Canola | plasma membrane | 28.91 | 38.53 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 29.98 | 38.5 |
| CDY24379 | Canola | plasma membrane | 31.91 | 38.24 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 34.48 | 38.21 |
| CDY58790 | Canola | peroxisome | 33.55 | 38.18 |
| CDY15432 | Canola | cytosol | 33.26 | 38.07 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 34.33 | 38.05 |
| CDX86445 | Canola | plasma membrane | 33.76 | 38.02 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.76 | 37.97 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 34.33 | 37.87 |
| CDY51560 | Canola | peroxisome | 33.76 | 37.81 |
| CDY04018 | Canola | plasma membrane | 33.26 | 37.55 |
| CDX85192 | Canola | plasma membrane | 33.4 | 36.88 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 1.78 | 36.76 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 23.05 | 32.79 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.57 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078G761 | UniProt:A0A078G761 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | EnsemblPlants:CDY20443 | ProteinID:CDY20443 | ProteinID:CDY20443.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00012515001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0004EE8F74 | SEG:seg | : | : | : |
Description
BnaC04g06010DBnaC04g06010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G761]
Coordinates
chrLK032108:-:66090..72628
Molecular Weight (calculated)
154708.0 Da
IEP (calculated)
6.022
GRAVY (calculated)
0.076
Length
1401 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVSRGLFGWS PPHIQPLTPV SEVSEPPESP SPYLDPGAEN GGGAGMATQA EEDEEMEEQE EMEPPPAAVP FSQLFACADR FDWVLMVLGS VAAAAHGTAL
0101: IVYLHYFAKI VEVLAYTAES GLIMPFVQLS LTIVYIAGGV FVSGWIEVSC WILTGERQTA VIRSKYVQVL LNQDMSFFDT YGNNGDIVSQ VLSDVLLIQS
0201: ALSEKVGNYI HNMATFISGL IIGFVNCWEI ALITLATGPF IVAAGGISNI FLHRLAENIQ DAYAEAASIA EQAVSYIRTL YAFTNETLAK YSYATSLQAT
0301: LRYGILISLV QGLGLGFTYG LAICSCALQL WIGRFFVIHG RATGGEIITA LFAVILSGLG LNQAATNFYS FDQGRIAAYR LFEMITRSSS GTNQEGTTLS
0401: AVEGNIEFRN VYFSYLSRPE IPVLSGFYLT VPAKKAVALV GRNGSGKSSI IPLMERFYDP TLGEVLLDGE NIKNLKLEWL RSQIGLVTQE PALLSLTIRE
0501: NIAYGRDATP DQIEEAAKKA RAHTFISSLE KGYETQVGKA GLTLTEEQKI KLSIARAVLL DPKILLLDEV TGGLDFEAER VVQEALDLLM LGRSTIIIAR
0601: RLSLIRNADY IAVMEEGQLL EMGTHDELIN LGNLYAELLK CEEATKLPRR MPVRNYNDSA GFQPERDSSA GRGFQEPSSP KMAKSPSLQR GHNVFRPQEM
0701: YFNREESPND HSPAPEKMGE NGSSLDVADK EPTIKRQDSF EMRLPELPKI DIQCPERQKS NGSDPESPIS PLLISDPQNE RSHSQTFSRP HGHSDDTSAN
0801: VMVAKDSQHK ESPSIWKLAQ LSFPEWLYAV LGSIGAAIFG SFNPLLAYVI ALVVTAYYTS KGSHLREEVD KWCLIIAGMG LVTVVANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAMLRNEVGW FDEEENSPDT LSMRLANDAT FVRAAFSNRL SILIQDSFAV IVAVLIGLLL GWRLALVALA TLPVLTLSAI AQKLWLAGFS
1001: KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKVMELYRLQ LQRILKQSFL HGMAIGFAFG FSQFLLFACN ALLLWYTAFS VHRGYMKLST ALTEYMVFSF
1101: ATFALVEPFG LAPYILKRRK SLASVFEIID RVPTIEPDDT SALSPPNVYG SIELKNIDFC YPTRPEVLVL SNFSLKISGG QTLAVVGVSG SGKSTIISLI
1201: ERYYDPVAGQ VFLDGRDLKS YNLRWLRSHM GLIQQEPIIF STTIRENIIY ARHNASEAEM KEAARIANAH HFISSLAHGY DTHIGMRGVE LTQGQKQRIA
1301: IARVVLKNAP ILLIDEASSS IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMRHVDNIV VLNGGKIVEE GTHDALAGKN GLYVRLMQPH FGKGLRQHRL
1401: I
0101: IVYLHYFAKI VEVLAYTAES GLIMPFVQLS LTIVYIAGGV FVSGWIEVSC WILTGERQTA VIRSKYVQVL LNQDMSFFDT YGNNGDIVSQ VLSDVLLIQS
0201: ALSEKVGNYI HNMATFISGL IIGFVNCWEI ALITLATGPF IVAAGGISNI FLHRLAENIQ DAYAEAASIA EQAVSYIRTL YAFTNETLAK YSYATSLQAT
0301: LRYGILISLV QGLGLGFTYG LAICSCALQL WIGRFFVIHG RATGGEIITA LFAVILSGLG LNQAATNFYS FDQGRIAAYR LFEMITRSSS GTNQEGTTLS
0401: AVEGNIEFRN VYFSYLSRPE IPVLSGFYLT VPAKKAVALV GRNGSGKSSI IPLMERFYDP TLGEVLLDGE NIKNLKLEWL RSQIGLVTQE PALLSLTIRE
0501: NIAYGRDATP DQIEEAAKKA RAHTFISSLE KGYETQVGKA GLTLTEEQKI KLSIARAVLL DPKILLLDEV TGGLDFEAER VVQEALDLLM LGRSTIIIAR
0601: RLSLIRNADY IAVMEEGQLL EMGTHDELIN LGNLYAELLK CEEATKLPRR MPVRNYNDSA GFQPERDSSA GRGFQEPSSP KMAKSPSLQR GHNVFRPQEM
0701: YFNREESPND HSPAPEKMGE NGSSLDVADK EPTIKRQDSF EMRLPELPKI DIQCPERQKS NGSDPESPIS PLLISDPQNE RSHSQTFSRP HGHSDDTSAN
0801: VMVAKDSQHK ESPSIWKLAQ LSFPEWLYAV LGSIGAAIFG SFNPLLAYVI ALVVTAYYTS KGSHLREEVD KWCLIIAGMG LVTVVANFLQ HFYFGIMGEK
0901: MTERVRRMMF SAMLRNEVGW FDEEENSPDT LSMRLANDAT FVRAAFSNRL SILIQDSFAV IVAVLIGLLL GWRLALVALA TLPVLTLSAI AQKLWLAGFS
1001: KGIQEMHRKA SLVLEDAVRN IYTVVAFCAG NKVMELYRLQ LQRILKQSFL HGMAIGFAFG FSQFLLFACN ALLLWYTAFS VHRGYMKLST ALTEYMVFSF
1101: ATFALVEPFG LAPYILKRRK SLASVFEIID RVPTIEPDDT SALSPPNVYG SIELKNIDFC YPTRPEVLVL SNFSLKISGG QTLAVVGVSG SGKSTIISLI
1201: ERYYDPVAGQ VFLDGRDLKS YNLRWLRSHM GLIQQEPIIF STTIRENIIY ARHNASEAEM KEAARIANAH HFISSLAHGY DTHIGMRGVE LTQGQKQRIA
1301: IARVVLKNAP ILLIDEASSS IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMRHVDNIV VLNGGKIVEE GTHDALAGKN GLYVRLMQPH FGKGLRQHRL
1401: I
0001: MMISRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE HGGTGTAAQA DDEEEMEEPE EMEPPPAAVP FSQLFACADR FDWVLMVFGS VAAAAHGTAL
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
Arabidopsis Description
ABCB6ABC transporter B family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPT1]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.