CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019135.1-P	Field mustard	plasma membrane	98.41	90.01
CDX92739	Canola	plasma membrane	96.74	88.48
CDX94395	Canola	plasma membrane	86.61	79.66
CDX89380	Canola	plasma membrane	86.96	77.41
AT4G25960.1	Thale cress	plasma membrane	86.52	77.14
CDY37953	Canola	plasma membrane	76.39	70.78
CDX93393	Canola	plasma membrane	76.3	70.69
VIT_02s0012g01660.t01	Wine grape	plasma membrane	74.19	67.74
KRH74394	Soybean	plasma membrane	73.04	66.53
KRH39563	Soybean	peroxisome	72.69	66.27
KRH45417	Soybean	plasma membrane	72.33	65.47
Solyc08g076720.2.1	Tomato	unclear	72.25	65.23
PGSC0003DMT400045176	Potato	peroxisome	71.72	64.76
EES05688	Sorghum	plasma membrane	70.66	63.65
CDX84897	Canola	cytosol	6.61	63.56
Zm00001d051514_P002	Maize	mitochondrion	69.87	62.84
Os02t0693700-02	Rice	plasma membrane	69.78	62.66
TraesCS6B01G291900.1	Wheat	peroxisome	69.52	62.47
TraesCS6D01G250000.1	Wheat	golgi	69.34	62.41
TraesCS6A01G264900.3	Wheat	golgi	69.6	62.4
HORVU6Hr1G067200.1	Barley	plastid	69.43	58.16
CDX86437	Canola	cytosol	7.58	57.72
HORVU6Hr1G067170.3	Barley	endoplasmic reticulum, vacuole	47.31	56.17
CDX86442	Canola	cytosol, mitochondrion, plastid	3.08	51.47
CDX86408	Canola	plasma membrane	47.31	43.41
CDY00109	Canola	plasma membrane	47.14	42.97
CDY27639	Canola	plasma membrane	46.08	42.94
CDY65012	Canola	plasma membrane	47.4	42.94
CDY20012	Canola	plasma membrane	47.31	42.86
CDY46744	Canola	cytosol, peroxisome, plasma membrane	46.78	39.69
CDX79704	Canola	plasma membrane	46.61	39.45
CDY35168	Canola	golgi, peroxisome, plasma membrane	37.62	39.14
CDX84896	Canola	plasma membrane	35.77	38.63
CDY25095	Canola	cytosol	40.53	38.14
CDX67881	Canola	cytosol	40.35	38.13
CDY27510	Canola	cytosol	39.91	37.78
CDY48003	Canola	cytosol	39.65	37.75
CDY15432	Canola	cytosol	40.62	37.66
CDX80072	Canola	cytosol	39.47	37.4
GSMUA_Achr4P17010_001	Banana	peroxisome	36.39	37.38
CDX89963	Canola	cytosol, nucleus, plasma membrane	41.32	37.1
CDY15249	Canola	cytosol, peroxisome, plasma membrane	41.5	37.09
CDY51307	Canola	cytosol, peroxisome, plasma membrane	41.15	36.95
CDY58790	Canola	peroxisome	39.56	36.47
CDY24379	Canola	plasma membrane	37.53	36.44
CDY37776	Canola	cytosol, peroxisome, plasma membrane	39.65	36.2
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	37.18	36.01
CDX86445	Canola	plasma membrane	39.3	35.85
CDY51560	Canola	peroxisome	38.77	35.17
CDX85192	Canola	plasma membrane	39.3	35.15
CDY04018	Canola	plasma membrane	38.41	35.13
CDY24958	Canola	mitochondrion, plasma membrane, plastid	40.62	33.05
CDY20443	Canola	cytosol, mitochondrion, plasma membrane	40.62	32.91
CDY07647	Canola	cytosol	40.62	32.91
CDY53591	Canola	cytosol, mitochondrion, plasma membrane	40.53	32.67
CDY65312	Canola	cytosol	39.91	32.38
CDX76106	Canola	cytosol, golgi, peroxisome	39.91	32.36
CDY21871	Canola	endoplasmic reticulum, plasma membrane	1.94	30.56
CDY64952	Canola	peroxisome, plasma membrane, vacuole	25.29	29.14

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	GO:A0A078HWB0	UniProt:A0A078HWB0	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY42770	ProteinID:CDY42770
ProteinID:CDY42770.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00075324001	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF415	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EEE307	SEG:seg	:	:

Description

BnaA03g47690DBnaA03g47690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWB0]

Coordinates

chrLK032533:-:236075..241697

Molecular Weight (calculated)

124786.0 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.151

Length

1135 amino acids

Sequence
(BLAST)

0001: MEPSDDLATE VEKEKKAATP KVSFLKLFSF ADFNDCVLMT LGSIGACIHG ASVPVFFIFF GKLINIIGIA YMDRHQASHK VAKYSLDFVY LSVAILFSSW
0101: LEVACWMHTG ERQAAKMRRA YLRSILSQDI SLFDTEASSG EVISAITSDI LVVQDALSEK VGNFLHYISR FIAGFAIGFT SVWQISLVTL AIVPLIALAG
0201: GMYAFVAIGL IARVRKSYIK AGQVAEEVIG NVRTVQAFTG EERAAKLYRG ALKSTYKYGR KAGLIKGLGL GSLHCILFLS WALLVWFTSV VVHKGIANAG
0301: ESFTTMLNVV IAGLSLGQAA PDISAFVRAK ASAHPIFQMI ERDTAAKTSA KSGRKLSKVD GHIQFTDVTF SYPSRPDVVI FDKLNLAIPA GKTVALVGGS
0401: GSGKSTVISL IERFYEPTSG AVLLDGNDIK ELDIKWLRGH IGLVSQEPAL FATTIRENII YGKDGATDEE IGRAAKLSDA FSFINNLPEG FETQNLVSNP
0501: DGAYSALLRL QEAASLECNP SLDRTLSRPH STQYSREQSR TSSCLEKESV TREDGEDQSK EAKVTMRRRL YSMIRPDWLY GICGTLCAFI AGSLMPLFAL
0601: GVSHSLVSYY EKGWDNTQKE VKKIAILFCF ASAITLIVYS IEHLCFGIMG ERLTRRVREK MFLAILKNEM GWFDEVDNTS SMLASTILLQ NLGLVVTSFV
0701: ISFMLNWRLT LVVLATYPLV ISGHISEKLF MQGYGGNLSK AYLKANMLAG ESVSNIRTVA AFCAEEKVLE LYSKELLEPS KRSFRRGQTA GLFYGISQFF
0801: IFSSYGLALW YGSTLMDNKI SSFKSLMKTF MVLIVTALAM GETLALAPDL LKGNQMIASV FEILDRKSQL VGETSEELTN VEGTIELKGI QFSYPSRPNV
0901: VIFKDFDLIV RSGQSMALVG QSGSGKSSVI SLILRFYDPT AGTIMIEGKD IKKLDLKALR KHIGLVQQEP ALFATTIYEN ILYGNEEASH SEVIESAMFA
1001: NAHSFITSLP EGYNTKVGER GVQMSGGQRQ RIAIARAILR NPEILLLDEA TSALDTESER VVQQALDRLM TNRTTVVIAH RLSTIKNADT ISVLHGGKIV
1101: QQGSHRWLVL NKVGPYFNLF NLQQQPAATT SLNTI

Best Arabidopsis Sequence Match ( AT1G10680.1 )
(BLAST)

0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP

Arabidopsis Description

ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.