Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g076720.2.1 | Tomato | unclear | 97.06 | 97.06 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 79.95 | 80.85 |
| KRH74394 | Soybean | plasma membrane | 78.92 | 79.61 |
| KRH39563 | Soybean | peroxisome | 78.68 | 79.44 |
| KRH45417 | Soybean | plasma membrane | 76.53 | 76.71 |
| CDX94395 | Canola | plasma membrane | 74.7 | 76.09 |
| Bra013936.1-P | Field mustard | plasma membrane | 74.62 | 76.01 |
| AT1G10680.1 | Thale cress | plasma membrane | 73.59 | 75.39 |
| AT4G25960.1 | Thale cress | plasma membrane | 75.89 | 74.94 |
| CDX93393 | Canola | plasma membrane | 72.39 | 74.29 |
| CDY37953 | Canola | plasma membrane | 72.39 | 74.29 |
| Os02t0693700-02 | Rice | plasma membrane | 74.62 | 74.21 |
| Bra019907.1-P | Field mustard | plasma membrane | 72.0 | 73.88 |
| CDX89380 | Canola | plasma membrane | 74.86 | 73.8 |
| EES05688 | Sorghum | plasma membrane | 73.75 | 73.57 |
| CDX92739 | Canola | plasma membrane | 72.39 | 73.33 |
| TraesCS6D01G250000.1 | Wheat | golgi | 73.27 | 73.04 |
| Bra019135.1-P | Field mustard | plasma membrane | 72.08 | 73.01 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 73.35 | 73.0 |
| TraesCS6A01G264900.3 | Wheat | golgi | 73.43 | 72.91 |
| Zm00001d051514_P002 | Maize | mitochondrion | 73.11 | 72.82 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 64.76 | 71.72 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 53.14 | 69.87 |
| HORVU6Hr1G067200.1 | Barley | plastid | 72.95 | 67.68 |
| PGSC0003DMT400011703 | Potato | cytosol | 8.27 | 62.28 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 50.84 | 51.16 |
| PGSC0003DMT400009924 | Potato | peroxisome | 49.56 | 46.74 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 44.39 | 44.32 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 44.47 | 44.29 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 44.31 | 43.28 |
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 38.58 | 42.66 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 40.33 | 41.83 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 41.37 | 41.47 |
| PGSC0003DMT400049576 | Potato | plasma membrane | 40.73 | 40.67 |
| PGSC0003DMT400013988 | Potato | plasma membrane | 39.3 | 40.29 |
| PGSC0003DMT400011930 | Potato | peroxisome | 40.89 | 39.94 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 34.69 | 39.46 |
| PGSC0003DMT400069516 | Potato | peroxisome | 37.15 | 39.38 |
| PGSC0003DMT400019085 | Potato | plasma membrane | 40.49 | 39.34 |
| PGSC0003DMT400058977 | Potato | plastid | 39.22 | 32.29 |
Protein Annotations
| EntrezGene:102601060 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M1BH80 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00664 | EnsemblPlantsGene:PGSC0003DMG400017524 | PGSC:PGSC0003DMG400017524 | EnsemblPlants:PGSC0003DMT400045176 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI00029520E5 | RefSeq:XP_006352948.1 | SEG:seg | : | : |
Description
P-glycoprotein [Source:PGSC_GENE;Acc:PGSC0003DMG400017524]
Coordinates
chr8:-:49324723..49334357
Molecular Weight (calculated)
137805.0 Da
IEP (calculated)
8.697
GRAVY (calculated)
0.138
Length
1257 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQQESHALS VDSSNISKMK QKNNNNGEEE RKKIHQKVSL LKLFSFADSY DYLLMILGSI GACLHGASVP VFFIFFGKMI NIAGLAYLFP AQTSHKVAKY
0101: SLDFVYLSVV ILFSSWIEVA CWMHSGERQA AKIRMAYLKS MLNQDISLFD TEASTGEVIS AITSDIIIVQ DAISEKAGNF LHYISRFLAG FTIGFIRVWQ
0201: ISLVTLSIVP LIALAGGIYA YVTIGLIARV RKSYIKAGEI AEEVVANIRT VQAFTGEEKA VKSYKGALLN TYKYGRKAGL AKGLGLGTLH CVLFLSWSLL
0301: VWFTSIVVHK NIANGGDSFT TMLNVVIAGL SLGQAAPDIT AFLRAKSAAY PIFEMIERDT ISKTSSKSGQ KLSKVDGHIQ FKDVCFSYPS RPDVVIFDKL
0401: SLDIPSGKIV ALVGGSGSGK STVISLIERF YEPLSGQILL DGCDIRHLDL NWLRQQIGLV NQEPALFATT IRENILYGKS DASLEDIARA AKLSEAMTFI
0501: NNLPDRFETQ VGERGVQLSG GQKQRIAISR AIVKNPSILL LDEATSALDA ESEKSVQDAL DRVMVGRTTV IVAHRLSTIR NADIIAVVNN GKIVETGSHE
0601: ELISKPNSAY ASLVQLQHAA SSHLHPSQEP TMGRPHSIRY SHELSRTTTR SRGASFRSEK SVSGIGAGGV EDVKSQNISA GRLYSMISPE WHYGVIGTVC
0701: AFIAGAQMPL FALGVSQALV SYYMDWDTTR HEVKKICFLF CVGAVLTVVV HAIAHTCFGI IGERLTLRMR ERMFSAMLRN EIGWFDEMNN SSSTLASRLE
0801: SDATLLRTVV VDRSTILLQN VGLVATSFII AFILNWRLTL VVIAMYPLIV SGHISEKLFM SGFGGDLSKA YLRANMFAGE AVSNIRTVAA FCAEEKVTDL
0901: YARELVEPAK RSFSRGQTAG ILYGVSQFFI FSSYALALWY GSVLMGKELT SFKAVMKSFM VLIVTALAMG ETLAMAPDLI KGNQMVASVF EVLDRKTEIA
1001: TDSGEEVTAV EGTIEFKDVE FCYPARPDVH IFRDFNMRVH AGKSMAIVGQ SGSGKSSVLA LILRFYDPIS GKVIIDGKDI RKLKLNSLRK HIGLVQQEPA
1101: LFATTIYENI LYGKEGASEA EVIQAAKLAN AHSFISALPD GYSTQVGERG VQLSGGQKQR VAIARAVLKN PEILLLDEAT SALDVESERI VQQALDRLMR
1201: NRTTVIVAHR LSTIKDADQI SVLQDGKIVD QGTHSALIEN RDGAYYKLIN LQQQQQQ
0101: SLDFVYLSVV ILFSSWIEVA CWMHSGERQA AKIRMAYLKS MLNQDISLFD TEASTGEVIS AITSDIIIVQ DAISEKAGNF LHYISRFLAG FTIGFIRVWQ
0201: ISLVTLSIVP LIALAGGIYA YVTIGLIARV RKSYIKAGEI AEEVVANIRT VQAFTGEEKA VKSYKGALLN TYKYGRKAGL AKGLGLGTLH CVLFLSWSLL
0301: VWFTSIVVHK NIANGGDSFT TMLNVVIAGL SLGQAAPDIT AFLRAKSAAY PIFEMIERDT ISKTSSKSGQ KLSKVDGHIQ FKDVCFSYPS RPDVVIFDKL
0401: SLDIPSGKIV ALVGGSGSGK STVISLIERF YEPLSGQILL DGCDIRHLDL NWLRQQIGLV NQEPALFATT IRENILYGKS DASLEDIARA AKLSEAMTFI
0501: NNLPDRFETQ VGERGVQLSG GQKQRIAISR AIVKNPSILL LDEATSALDA ESEKSVQDAL DRVMVGRTTV IVAHRLSTIR NADIIAVVNN GKIVETGSHE
0601: ELISKPNSAY ASLVQLQHAA SSHLHPSQEP TMGRPHSIRY SHELSRTTTR SRGASFRSEK SVSGIGAGGV EDVKSQNISA GRLYSMISPE WHYGVIGTVC
0701: AFIAGAQMPL FALGVSQALV SYYMDWDTTR HEVKKICFLF CVGAVLTVVV HAIAHTCFGI IGERLTLRMR ERMFSAMLRN EIGWFDEMNN SSSTLASRLE
0801: SDATLLRTVV VDRSTILLQN VGLVATSFII AFILNWRLTL VVIAMYPLIV SGHISEKLFM SGFGGDLSKA YLRANMFAGE AVSNIRTVAA FCAEEKVTDL
0901: YARELVEPAK RSFSRGQTAG ILYGVSQFFI FSSYALALWY GSVLMGKELT SFKAVMKSFM VLIVTALAMG ETLAMAPDLI KGNQMVASVF EVLDRKTEIA
1001: TDSGEEVTAV EGTIEFKDVE FCYPARPDVH IFRDFNMRVH AGKSMAIVGQ SGSGKSSVLA LILRFYDPIS GKVIIDGKDI RKLKLNSLRK HIGLVQQEPA
1101: LFATTIYENI LYGKEGASEA EVIQAAKLAN AHSFISALPD GYSTQVGERG VQLSGGQKQR VAIARAVLKN PEILLLDEAT SALDVESERI VQQALDRLMR
1201: NRTTVIVAHR LSTIKDADQI SVLQDGKIVD QGTHSALIEN RDGAYYKLIN LQQQQQQ
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.