Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 5
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g018130.1.1 | Tomato | plasma membrane | 94.29 | 90.67 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 73.0 | 71.37 |
| VIT_01s0137g00350.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 66.39 | 65.02 |
| PGSC0003DMT400011703 | Potato | cytosol | 7.99 | 58.68 |
| PGSC0003DMT400049576 | Potato | plasma membrane | 58.24 | 56.71 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 51.06 | 49.56 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 50.98 | 49.37 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 50.9 | 49.33 |
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 44.13 | 47.58 |
| Os04t0481700-01 | Rice | plasma membrane | 25.94 | 47.46 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 41.27 | 40.51 |
| PGSC0003DMT400045176 | Potato | peroxisome | 40.29 | 39.3 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 39.97 | 38.92 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 40.05 | 38.91 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 40.7 | 38.77 |
| PGSC0003DMT400011930 | Potato | peroxisome | 40.21 | 38.31 |
| PGSC0003DMT400009924 | Potato | peroxisome | 41.52 | 38.18 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 36.7 | 37.13 |
| PGSC0003DMT400069516 | Potato | peroxisome | 35.24 | 36.42 |
| PGSC0003DMT400019085 | Potato | plasma membrane | 37.77 | 35.78 |
| PGSC0003DMT400058977 | Potato | plastid | 38.42 | 30.84 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M1A3L6 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF00664 | EnsemblPlantsGene:PGSC0003DMG400005483 | PGSC:PGSC0003DMG400005483 | EnsemblPlants:PGSC0003DMT400013988 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF212 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0002969027 | SEG:seg | : | : | : |
Description
Multidrug/pheromone exporter, MDR family, ABC transporter family [Source:PGSC_GENE;Acc:PGSC0003DMG400005483]
Coordinates
chr7:-:11605714..11610849
Molecular Weight (calculated)
134436.0 Da
IEP (calculated)
8.718
GRAVY (calculated)
0.141
Length
1226 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGGKYGLFQY ADGIDKLLML LGLVGSIGDG LMTPLNMIIL GSLIDDFGTA DDSFSNKIVD DYALKLLYVA VGVGVSAFIE GLCWTRTAER QTSRIRKEYL
0101: KSVLRQEVGF FEKQDASSST FQVISTISTD THIIQDVIAE KIPTCLAHLS AFVCGLIVAF FLSWRLALVS FPFSLGFVIP GVAFGSLLMK LAMKMKDTYG
0201: IAGSIVEQEI SSIRTVYSFV GESQTVRRYS RALEESMKLG LRQGFTKGLL IGSMGTVYVA WSFESWAGSL LVANRGESGG RVFISAVSLV LGGLSCMAAL
0301: PNLSIMIEVM AAASKIFELI NRTPEIDSED TKGSVLAYLR GDIEFKEVTF SYSSRPKVQV LQNICLKVKS GKTVGIVGGS GSGKSTIISL LERFYDPVKG
0401: DIFFDGHKIK RLKLQWLRSQ MGLVNQEPAL FATSIKENIL FGNEGASLEM VVEAAKASNA HEFIVSLPNG YSTHVGQLGF QLSGGQKQRI AIARALIKDP
0501: RILLLDEATS ALDAESERLV QEAIHQVSQG RTTIVIAHRL TTICKVDKII VLQSGIIVET GSHDKLMQIN EGEGGVYFNM VKLQLSTSRN TTDSPYHYKE
0601: ATSYLRRKDD NTPKFSFFAR SSWQNSPGNT PFSPAISTSY APSIQTYSFC GSDYEYSEMK WNSALLGCLG AAIFGALQPA FAFCLGSVVS TYLINDSSKL
0701: KSEAKLYSLM FLTIGIISFF ANLIQHYNFA VMGERLIKTL REKMLTSLLT FEVGWYDRDE NTSAAICSRL STDANMVRSL VGDRMSLLVQ VLVSASIAFG
0801: LGLIISWRIA IVLISVQPFT ITIFYSRSVV MKRMSETSQK VQNEGNQLAS EAVINHRTIT AFSSQDKMLA LYAETLKGPN KENVKQSWLS GIVLFFSLFL
0901: TAASVSLTFW YGGRLMKKNL VSAIHLFQFF FILLSTGKDI ADAGSMSSDL ARGGSAISSV FKILDMKSEI PPEDPQGMQA KNPIKGKIEL KHVYFSYPSR
1001: PEQVIFHDMS PKVDAGKTVA LVGSSGSGKS TIIGLIERFY DPTKGLVLID DRDIKIYNLR SLRSQMALVS QEPTLFADTI RQNIVYGKEE ATDSEIKKAA
1101: ILANAHEFIS SMKDGYETYC GERGVQLSGG QKQGIALARA IVRNPAILLL YEATNALDSV SENLLQEALE KIMVGRTCVV VAHRLSTIRK AGTIVVINNG
1201: KVVEQGSHLQ LLDLGHDGAY FSLMKL
0101: KSVLRQEVGF FEKQDASSST FQVISTISTD THIIQDVIAE KIPTCLAHLS AFVCGLIVAF FLSWRLALVS FPFSLGFVIP GVAFGSLLMK LAMKMKDTYG
0201: IAGSIVEQEI SSIRTVYSFV GESQTVRRYS RALEESMKLG LRQGFTKGLL IGSMGTVYVA WSFESWAGSL LVANRGESGG RVFISAVSLV LGGLSCMAAL
0301: PNLSIMIEVM AAASKIFELI NRTPEIDSED TKGSVLAYLR GDIEFKEVTF SYSSRPKVQV LQNICLKVKS GKTVGIVGGS GSGKSTIISL LERFYDPVKG
0401: DIFFDGHKIK RLKLQWLRSQ MGLVNQEPAL FATSIKENIL FGNEGASLEM VVEAAKASNA HEFIVSLPNG YSTHVGQLGF QLSGGQKQRI AIARALIKDP
0501: RILLLDEATS ALDAESERLV QEAIHQVSQG RTTIVIAHRL TTICKVDKII VLQSGIIVET GSHDKLMQIN EGEGGVYFNM VKLQLSTSRN TTDSPYHYKE
0601: ATSYLRRKDD NTPKFSFFAR SSWQNSPGNT PFSPAISTSY APSIQTYSFC GSDYEYSEMK WNSALLGCLG AAIFGALQPA FAFCLGSVVS TYLINDSSKL
0701: KSEAKLYSLM FLTIGIISFF ANLIQHYNFA VMGERLIKTL REKMLTSLLT FEVGWYDRDE NTSAAICSRL STDANMVRSL VGDRMSLLVQ VLVSASIAFG
0801: LGLIISWRIA IVLISVQPFT ITIFYSRSVV MKRMSETSQK VQNEGNQLAS EAVINHRTIT AFSSQDKMLA LYAETLKGPN KENVKQSWLS GIVLFFSLFL
0901: TAASVSLTFW YGGRLMKKNL VSAIHLFQFF FILLSTGKDI ADAGSMSSDL ARGGSAISSV FKILDMKSEI PPEDPQGMQA KNPIKGKIEL KHVYFSYPSR
1001: PEQVIFHDMS PKVDAGKTVA LVGSSGSGKS TIIGLIERFY DPTKGLVLID DRDIKIYNLR SLRSQMALVS QEPTLFADTI RQNIVYGKEE ATDSEIKKAA
1101: ILANAHEFIS SMKDGYETYC GERGVQLSGG QKQGIALARA IVRNPAILLL YEATNALDSV SENLLQEALE KIMVGRTCVV VAHRLSTIRK AGTIVVINNG
1201: KVVEQGSHLQ LLDLGHDGAY FSLMKL
0001: MKSFGSVRSI FMHANSVDLV LMGLGLIGAV GDGFITPIIF FITGLLLNDI GDSSFGDKTF MHAIMKNAVA LLYVAGASLV ICFVEGYCWT RTGERQASRM
0101: REKYLRAVLR QDVGYFDLHV TSTSDVITSV SSDTLVIQDV LSEKLPNFLM SASAFVASYI VGFIMLWRLT IVGFPFFILL LIPGLMCGRA LINISRKIRE
0201: EYNEAGSIAE QAISLVRTVY AFGSERKMIS KFSAALEGSV KLGLRQGIAK GIAIGSNGVT YAIWGFMTWY GSRMVMYHGA KGGTIFAVII CITYGGTSLG
0301: RGLSNLKYFS EAVVAGERII EVIKRVPDID SDNPRGQVLE NIKGEVQFKH VKFMYSSRPE TPIFDDLCLR IPSGKSVALV GGSGSGKSTV ISLLQRFYDP
0401: IVGEILIDGV SIKKLQVKWL RSQMGLVSQE PALFATSIEE NILFGKEDAS FDEVVEAAKS SNAHDFISQF PLGYKTQVGE RGVQMSGGQK QRISIARAII
0501: KSPTLLLLDE ATSALDSESE RVVQEALDNA TIGRTTIVIA HRLSTIRNVD VICVFKNGQI VETGSHEELM ENVDGQYTSL VRLQIMENEE SNDNVSVSMR
0601: EGQFSNFNKD VKYSSRLSIQ SRSSLFATSS IDTNLAGSIP KDKKPSFKRL MAMNKPEWKH ALYGCLSAVL YGALHPIYAY ASGSMVSVYF LTSHDEMKEK
0701: TRIYVLLFVG LAVLCFLISI IQQYSFAYMG EYLTKRIREN ILSKLLTFEV SWFDEDENSS GSICSRLAKD ANVVRSLVGE RVSLLVQTIS AVSVACTLGL
0801: AISWKLSIVM IAIQPVVVGC FYTQRIVLKS ISKKAIKAQD ESSKLAAEAV SNIRTITAFS SQERILKLLK MVQEGPQREN IRQSWLAGIV LATSRSLMTC
0901: TSALNYWYGA RLIIDGKITS KAFFELFILF VSTGRVIADA GAMTMDLAKG SDAVGSVFAV LDRYTNIEPE KPDGFVPQNI KGQIKFVNVD FAYPTRPDVI
1001: IFKNFSIDID EGKSTAIVGP SGSGKSTIIG LIERFYDPLK GIVKIDGRDI RSYHLRSLRQ HIGLVSQEPI LFAGTIRENI MYGGASDKID ESEIIEAAKA
1101: ANAHDFIVTL SDGYDTYCGD RGVQLSGGQK QRIAIARAVL KNPSVLLLDE ATSALDNQSE RMVQDALGRL MVGRTSVVIA HRLSTIQNCD TITVLDKGKV
1201: VECGTHSSLL AKGPTGVYFS LVSLQRTRY
0101: REKYLRAVLR QDVGYFDLHV TSTSDVITSV SSDTLVIQDV LSEKLPNFLM SASAFVASYI VGFIMLWRLT IVGFPFFILL LIPGLMCGRA LINISRKIRE
0201: EYNEAGSIAE QAISLVRTVY AFGSERKMIS KFSAALEGSV KLGLRQGIAK GIAIGSNGVT YAIWGFMTWY GSRMVMYHGA KGGTIFAVII CITYGGTSLG
0301: RGLSNLKYFS EAVVAGERII EVIKRVPDID SDNPRGQVLE NIKGEVQFKH VKFMYSSRPE TPIFDDLCLR IPSGKSVALV GGSGSGKSTV ISLLQRFYDP
0401: IVGEILIDGV SIKKLQVKWL RSQMGLVSQE PALFATSIEE NILFGKEDAS FDEVVEAAKS SNAHDFISQF PLGYKTQVGE RGVQMSGGQK QRISIARAII
0501: KSPTLLLLDE ATSALDSESE RVVQEALDNA TIGRTTIVIA HRLSTIRNVD VICVFKNGQI VETGSHEELM ENVDGQYTSL VRLQIMENEE SNDNVSVSMR
0601: EGQFSNFNKD VKYSSRLSIQ SRSSLFATSS IDTNLAGSIP KDKKPSFKRL MAMNKPEWKH ALYGCLSAVL YGALHPIYAY ASGSMVSVYF LTSHDEMKEK
0701: TRIYVLLFVG LAVLCFLISI IQQYSFAYMG EYLTKRIREN ILSKLLTFEV SWFDEDENSS GSICSRLAKD ANVVRSLVGE RVSLLVQTIS AVSVACTLGL
0801: AISWKLSIVM IAIQPVVVGC FYTQRIVLKS ISKKAIKAQD ESSKLAAEAV SNIRTITAFS SQERILKLLK MVQEGPQREN IRQSWLAGIV LATSRSLMTC
0901: TSALNYWYGA RLIIDGKITS KAFFELFILF VSTGRVIADA GAMTMDLAKG SDAVGSVFAV LDRYTNIEPE KPDGFVPQNI KGQIKFVNVD FAYPTRPDVI
1001: IFKNFSIDID EGKSTAIVGP SGSGKSTIIG LIERFYDPLK GIVKIDGRDI RSYHLRSLRQ HIGLVSQEPI LFAGTIRENI MYGGASDKID ESEIIEAAKA
1101: ANAHDFIVTL SDGYDTYCGD RGVQLSGGQK QRIAIARAVL KNPSVLLLDE ATSALDNQSE RMVQDALGRL MVGRTSVVIA HRLSTIQNCD TITVLDKGKV
1201: VECGTHSSLL AKGPTGVYFS LVSLQRTRY
Arabidopsis Description
ABCB22ABC transporter B family member 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSJ2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.