Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- plasma membrane 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011703 | Potato | cytosol | 12.82 | 98.8 |
| Solyc12g098840.1.1 | Tomato | peroxisome | 88.11 | 88.59 |
| Os05t0137200-01 | Rice | plasma membrane | 20.59 | 67.43 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 56.64 | 65.91 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 63.71 | 63.71 |
| KRH19486 | Soybean | cytosol, peroxisome, plasma membrane | 62.63 | 63.27 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 44.21 | 62.8 |
| KRH02481 | Soybean | plasma membrane | 62.16 | 62.75 |
| VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.01 | 62.67 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 58.12 | 61.72 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 54.78 | 61.09 |
| KRH02482 | Soybean | cytosol, peroxisome, plasma membrane | 61.38 | 60.63 |
| KXG32330 | Sorghum | plastid | 59.44 | 59.77 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 59.13 | 59.55 |
| KRH19480 | Soybean | plasma membrane | 55.32 | 59.04 |
| KRH02484 | Soybean | plasma membrane | 57.73 | 58.69 |
| TraesCS1A01G081300.1 | Wheat | unclear | 57.96 | 58.46 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.73 | 58.27 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 57.73 | 58.23 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 57.96 | 58.15 |
| KRH19479 | Soybean | plasma membrane | 57.73 | 57.2 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 58.9 | 56.78 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 55.4 | 56.5 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 55.63 | 56.38 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 52.21 | 53.38 |
| PGSC0003DMT400019085 | Potato | plasma membrane | 51.36 | 51.08 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 41.41 | 42.67 |
| PGSC0003DMT400048379 | Potato | golgi, peroxisome, plasma membrane | 36.44 | 41.25 |
| PGSC0003DMT400045176 | Potato | peroxisome | 39.94 | 40.89 |
| PGSC0003DMT400013988 | Potato | plasma membrane | 38.31 | 40.21 |
| PGSC0003DMT400027962 | Potato | golgi, plasma membrane, vacuole | 39.08 | 40.11 |
| PGSC0003DMT400009924 | Potato | peroxisome | 40.79 | 39.38 |
| PGSC0003DMT400049576 | Potato | plasma membrane | 38.31 | 39.16 |
| PGSC0003DMT400069516 | Potato | peroxisome | 34.42 | 37.35 |
| PGSC0003DMT400058977 | Potato | plastid | 39.39 | 33.2 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M1A0E1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| EnsemblPlantsGene:PGSC0003DMG400004681 | PGSC:PGSC0003DMG400004681 | EnsemblPlants:PGSC0003DMT400011930 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF292 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI0002966D7E | SEG:seg | : | : | : | : |
Description
CjMDR1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004681]
Coordinates
chr12:-:59696641..59702825
Molecular Weight (calculated)
139660.0 Da
IEP (calculated)
7.163
GRAVY (calculated)
0.098
Length
1287 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEENATQRG IDNMENKVIV SSDGSSCARV QDKTEKQKVA AAAAEVPYYK LLSFADPTDH ALMIIGSIAA VGTGISFSLM AVLFGEIVDS FGLTVDNDKV
0101: VGEVSKVSLK FIYLALGSGL ATFVQVTCWT VTGERQAARI RCSYLKTVLR QDIGFFDQET NTGVIIERLS SDTLTIQDAI GEKVGKFIQI LATFLGGLVI
0201: AFIKGWRLAL VLSSSIPPLV LSSAVLTILL VKLASRSQTA YSEAATVVEQ TISSIRTVAS YTGERRAISE YYNSLNKAYY SGVQEGLVSG LSMGVFFFVF
0301: YSSYALAVWY GAKMILDHNY TGGDVMNVMM ATLTGSFTLG QASPCLHAFA AGKAAAFKMF QTINRKPVID PYDMKGQKLL DISGDIELKN VHFCYPARPQ
0401: ESIFDGFSVS IPKGTTTALV GRSGSGKSTV ISLIVRFYDP QAGEVLIDGI NIKEFQLRWI RGKIGLVSQE PVLFGSTIKD NVAYGKDDAT LEEIKDAVRL
0501: ANASEFIDKL PQGLDTRVGD HGSQLSGGQK QRIAIARAIL KDPKILLLDE ATSALDAESE RIVQETLDSV MINRTTVIVA HRLSTVKNAD AIAVLQEGKI
0601: IEKGSHLELM RNKEGAYVQL IQLQELSKYS GEKDSNELDS EEIIINPNNQ SNHQIFVTRS TSRHSSEVEN SSHHPASISV SAAQKAVGEC HYPNSTVILR
0701: KDKDSTFYRL ALMTRPELPE LLLGCVAAVV NALILPIFGV LLSYVIKTFY EPAHELRKHS GFWSLLFLGL GLTSLLAKPL RTFFFAVAGC KLIKRIRLMC
0801: FEQLVYMEIS WFDRKENSIG AIGSRLSTDA ASVRGMLGES LALLVENTST AVAGLVIGLE ASWQMTLIMI VMVPLIGLHG YLRLKYTNGG GADVKKLYDD
0901: ASRVAHEAVG SIRTVASFSA EEKVVQLYKR KCEGPVRAGI KEGLLSAAGF GFSMFCFYSV YAASFYAGAR LIESGKVTFA EVFRVFYGLS LTATAISQSG
1001: GLAPDSSKAK TGASSIFALL DRQSKIDSNN NSGMILDNAK GNIEFQHVSF NYPSRPEAQV LKDLCLAIRS GETVALVGES GSGKSTVISL LQRFYDPDSG
1101: LITLDGLEIQ KLNVKWLREQ MGLVSQEPIL FNDTIRANIA YGKESDATEA EILAAAELAN AHSFISGLQQ GYETVVGERG IQLSGGQKQR VAIARAIVKC
1201: PKILLLDEAT SALDSESEKV VQDALDRVRS GRTTVVVAHR LSTIKGADVI AVIKDGVIVE KGNHETLVNR QDGIYASLVS KSASTMK
0101: VGEVSKVSLK FIYLALGSGL ATFVQVTCWT VTGERQAARI RCSYLKTVLR QDIGFFDQET NTGVIIERLS SDTLTIQDAI GEKVGKFIQI LATFLGGLVI
0201: AFIKGWRLAL VLSSSIPPLV LSSAVLTILL VKLASRSQTA YSEAATVVEQ TISSIRTVAS YTGERRAISE YYNSLNKAYY SGVQEGLVSG LSMGVFFFVF
0301: YSSYALAVWY GAKMILDHNY TGGDVMNVMM ATLTGSFTLG QASPCLHAFA AGKAAAFKMF QTINRKPVID PYDMKGQKLL DISGDIELKN VHFCYPARPQ
0401: ESIFDGFSVS IPKGTTTALV GRSGSGKSTV ISLIVRFYDP QAGEVLIDGI NIKEFQLRWI RGKIGLVSQE PVLFGSTIKD NVAYGKDDAT LEEIKDAVRL
0501: ANASEFIDKL PQGLDTRVGD HGSQLSGGQK QRIAIARAIL KDPKILLLDE ATSALDAESE RIVQETLDSV MINRTTVIVA HRLSTVKNAD AIAVLQEGKI
0601: IEKGSHLELM RNKEGAYVQL IQLQELSKYS GEKDSNELDS EEIIINPNNQ SNHQIFVTRS TSRHSSEVEN SSHHPASISV SAAQKAVGEC HYPNSTVILR
0701: KDKDSTFYRL ALMTRPELPE LLLGCVAAVV NALILPIFGV LLSYVIKTFY EPAHELRKHS GFWSLLFLGL GLTSLLAKPL RTFFFAVAGC KLIKRIRLMC
0801: FEQLVYMEIS WFDRKENSIG AIGSRLSTDA ASVRGMLGES LALLVENTST AVAGLVIGLE ASWQMTLIMI VMVPLIGLHG YLRLKYTNGG GADVKKLYDD
0901: ASRVAHEAVG SIRTVASFSA EEKVVQLYKR KCEGPVRAGI KEGLLSAAGF GFSMFCFYSV YAASFYAGAR LIESGKVTFA EVFRVFYGLS LTATAISQSG
1001: GLAPDSSKAK TGASSIFALL DRQSKIDSNN NSGMILDNAK GNIEFQHVSF NYPSRPEAQV LKDLCLAIRS GETVALVGES GSGKSTVISL LQRFYDPDSG
1101: LITLDGLEIQ KLNVKWLREQ MGLVSQEPIL FNDTIRANIA YGKESDATEA EILAAAELAN AHSFISGLQQ GYETVVGERG IQLSGGQKQR VAIARAIVKC
1201: PKILLLDEAT SALDSESEKV VQDALDRVRS GRTTVVVAHR LSTIKGADVI AVIKDGVIVE KGNHETLVNR QDGIYASLVS KSASTMK
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.