Factsheet for TraesCS1B01G099000.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	98.82	98.75
TraesCS1A01G081300.1	Wheat	unclear	98.75	98.67
HORVU1Hr1G017460.3	Barley	plasma membrane	97.8	97.19
Os05t0137200-01	Rice	plasma membrane	26.98	87.53
OQU77362	Sorghum	mitochondrion, plasma membrane	78.27	86.48
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	64.78	74.68
PGSC0003DMT400011703	Potato	cytosol	9.73	74.25
GSMUA_Achr1P25070_001	Banana	plasma membrane	50.2	70.64
TraesCS6B01G145800.1	Wheat	cytosol	13.65	68.77
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	67.76	67.39
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	67.29	66.93
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	68.08	66.92
CDY25095	Canola	cytosol	63.22	66.83
CDX67881	Canola	cytosol	62.82	66.69
CDY48003	Canola	cytosol	61.88	66.19
KRH19486	Soybean	cytosol, peroxisome, plasma membrane	66.12	66.17
CDY27510	Canola	cytosol	62.2	66.14
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	66.75	66.12
CDX80072	Canola	cytosol	62.04	66.03
KRH02481	Soybean	plasma membrane	65.49	65.49
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	65.65	65.24
VIT_05s0020g00890.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.2	65.22
CDY37776	Canola	cytosol, peroxisome, plasma membrane	63.37	65.0
Bra004484.1-P	Field mustard	cytosol	65.25	64.8
CDY51307	Canola	cytosol, peroxisome, plasma membrane	64.24	64.79
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	65.65	64.78
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	65.49	64.78
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	65.18	64.62
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	65.65	64.58
CDY15432	Canola	cytosol	61.96	64.54
CDX89963	Canola	cytosol, nucleus, plasma membrane	63.84	64.4
Bra040475.1-P	Field mustard	cytosol	64.78	64.18
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.16	64.11
CDY15249	Canola	cytosol, peroxisome, plasma membrane	63.69	63.94
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	64.0	63.85
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	60.39	63.53
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	62.82	63.27
CDY24379	Canola	plasma membrane	57.8	63.05
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	60.47	62.68
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	60.31	62.57
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	57.25	62.29
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.84	61.98
KRH02482	Soybean	cytosol, peroxisome, plasma membrane	62.2	60.86
Bra003445.1-P	Field mustard	peroxisome	59.61	60.61
Solyc06g009290.2.1	Tomato	nucleus	66.51	60.57
CDY58790	Canola	peroxisome	58.12	60.2
KRH19480	Soybean	plasma membrane	56.39	59.62
CDY51560	Canola	peroxisome	58.2	59.31
KRH02484	Soybean	plasma membrane	58.43	58.85
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	58.67	58.53
Solyc12g098840.1.1	Tomato	peroxisome	58.27	58.05
TraesCS3B01G290300.2	Wheat	peroxisome	57.65	58.01
PGSC0003DMT400011930	Potato	peroxisome	58.27	57.73
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	56.47	57.42
KRH19479	Soybean	plasma membrane	58.27	57.2
TraesCS2B01G012300.1	Wheat	plasma membrane	56.08	56.84
TraesCS2B01G012100.3	Wheat	plasma membrane	55.29	56.27
Solyc11g067300.1.1	Tomato	plasma membrane	54.98	55.63
TraesCS6B01G145600.1	Wheat	peroxisome	54.98	55.46
TraesCS1B01G387400.1	Wheat	peroxisome	54.82	55.26
TraesCS3B01G291000.1	Wheat	peroxisome	53.96	54.69
TraesCS2B01G012200.1	Wheat	golgi	46.27	54.68
TraesCS3B01G291100.3	Wheat	peroxisome	53.73	54.19
TraesCS3B01G290700.1	Wheat	peroxisome	44.16	53.72
PGSC0003DMT400019085	Potato	plasma membrane	53.1	52.32
TraesCS2B01G550700.2	Wheat	plasma membrane	43.69	44.31
TraesCS2B01G341800.2	Wheat	cytosol, peroxisome, plasma membrane	43.22	43.59
TraesCS6B01G291900.1	Wheat	peroxisome	42.75	43.15
TraesCS7B01G181700.1	Wheat	cytosol	42.59	39.69
TraesCS2B01G358200.1	Wheat	plasma membrane	38.2	38.5
TraesCS7B01G203400.1	Wheat	peroxisome	37.25	37.76
TraesCS4B01G298100.1	Wheat	mitochondrion, plasma membrane	38.43	37.29
TraesCS6B01G170700.1	Wheat	plasma membrane	36.47	37.08
TraesCS7B01G203300.1	Wheat	peroxisome	36.47	36.79
TraesCS4B01G203000.1	Wheat	cytosol, plasma membrane, plastid	39.06	35.34
TraesCS3B01G607600.1	Wheat	cytosol, plasma membrane, vacuole	38.51	34.82

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G099000	EnsemblPlants:TraesCS1B01G099000.1	TIGR:cd03249	SEG:seg

Description

No Description!

Coordinates

chr1B:+:106679532..106685237

Molecular Weight (calculated)

136495.0 Da

IEP (calculated)

7.636

GRAVY (calculated)

0.157

Length

1275 amino acids

Sequence
(BLAST)

0001: MSESSRAFNV EGGQPADGAR AGGKRRPGAG GGGGSVPFHR LFAFADGADA ALMLVGAVGA VANGAALPLM TVLFGGLVDA FGGAAGGSGD VLARVSQVSL
0101: EFVYLAIASA VASFAQVTCW MITGERQAAR IRNMYLRTIL RQEIAFFDMY TSTGEVVGRM SGDTVLIQDA MGEKVGKFIQ LMVTFFGGFA VAFAQGWLLT
0201: LVMVATIPPL VLSGAVMSNV VARMASLGQA AYAEAAVVVE QTVGSIRTVA SFTGEKKAVE KYNKSLKCAY SSGVREGLVA AIGMGTVMML LFCGYSLGVW
0301: YGAKLILEKG YTGAQVMNVI FAVLTGSLAL GQASPSMKAF AGGQAAAYKM FETINREPEI DAYSTEGRML DDIQGDIEFR DVHFSYPTRP NEQIFRGFSL
0401: AIQSAKTVAL VGQSGSGKST VISLIERFYD PQLGEVLIDG VNIKELQLKW IRSKIGLVSQ EPALFAASIR DNIAYGKDNA TDQEIRAAAE LANASKFIDK
0501: LPQGFSTSVG EHGTQLSGGQ KQRIAIARAI LKDPRILLLD EATSALDTES ERIVQEALDR VMTNRTTVIV AHRLTTVRNA DTIAVICRGS IVEKGPHHDL
0601: LRDPEGAYSQ LIRLQETSRA SEGASNQNKS GRKSDTGIWL GKQSLVNQST SQRSSRDNSS HHSFSVPFGI PHEIDVQVGC SKNITDEIQQ EVPLSRLASL
0701: NKPEVPVLIL GSVASAISGV IFPIFAILLS NVIKAFYEPP QMLKKDAAFW SSMFLIFGAV YFVSLPVGSY FFSVAGCKLI RRIRLMTFEK VVNMEIGWFD
0801: DPHNSSGSIG SRLSSDAAKV RGLVGDTLQL VVQNSATLVA GLVIAFVSNW ELSLIILALI PLIGLNGWIQ MKFIQGFSAD AKMMYEEASQ VANDAVSSIR
0901: TVASFSAEEK VMDLYNKKCE GPLQTGIRTG IISGIGFGVS FFLLFGVYAA SFYAGARLVE DKKTTFPKVF RVFLALTMAA IGVSHTSTLT SDSSRARSAV
1001: SSIFAIVDRK SMIDPSDDAG VNVEPLRGDI EFRHVRFRYP TRPDIQIFED LCLTIQSGKT VALVGESGSG KSTAIALLQR FYDPDAGHIL LDGVDIQKFQ
1101: VRWLRQQMGL VSQEPALFND TIRANIAYGK EGEATESDIV SAAQLANAHK FISSLQQGYD TVVGERGAQL SGGQKQRVAI ARAVAKDPRI LLLDEATSAL
1201: DAESERAVQD ALDRVAASRT TVVVAHRLST VRGADVIAVV KDGAIVERGT HDALIAVKGG AYASLVALHS ASASS

Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)

0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS

Arabidopsis Description

ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.