Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67881 | Canola | cytosol | 97.84 | 98.25 |
| AT3G62150.2 | Thale cress | cytosol, nucleus, plasma membrane | 95.85 | 89.2 |
| CDY27510 | Canola | cytosol | 84.66 | 85.15 |
| CDX80072 | Canola | cytosol | 83.58 | 84.14 |
| CDY48003 | Canola | cytosol | 81.76 | 82.72 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 81.76 | 79.32 |
| Os05t0137200-01 | Rice | plasma membrane | 24.71 | 75.83 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 67.74 | 73.87 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 75.62 | 72.15 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 75.7 | 71.89 |
| KRH69152 | Soybean | cytosol, peroxisome, plasma membrane | 75.46 | 70.98 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 76.2 | 70.86 |
| KRH33644 | Soybean | cytosol, peroxisome, plasma membrane | 75.29 | 70.83 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 75.12 | 70.4 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 73.63 | 70.25 |
| CDY15432 | Canola | cytosol | 71.23 | 70.18 |
| KRH68334 | Soybean | cytosol, peroxisome, plasma membrane | 72.97 | 68.59 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 72.8 | 68.11 |
| CDY24379 | Canola | plasma membrane | 65.59 | 67.66 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 50.66 | 67.44 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 67.58 | 67.24 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 65.34 | 67.24 |
| CDY58790 | Canola | peroxisome | 68.16 | 66.78 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 62.85 | 65.68 |
| CDY51560 | Canola | peroxisome | 67.91 | 65.47 |
| KXG32330 | Sorghum | plastid | 69.4 | 65.39 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 69.24 | 65.34 |
| Solyc06g009290.2.1 | Tomato | nucleus | 74.79 | 64.43 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 57.63 | 63.7 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 67.0 | 63.32 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.83 | 63.22 |
| TraesCS1A01G081300.1 | Wheat | unclear | 66.75 | 63.09 |
| CDX84897 | Canola | cytosol | 6.14 | 62.71 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 66.5 | 62.51 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 68.66 | 62.02 |
| CDX86437 | Canola | cytosol | 7.38 | 59.73 |
| GSMUA_Achr9P16700_001 | Banana | plasma membrane | 62.19 | 59.06 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 3.15 | 55.88 |
| CDX86408 | Canola | plasma membrane | 45.69 | 44.54 |
| CDY00109 | Canola | plasma membrane | 45.61 | 44.18 |
| CDY65012 | Canola | plasma membrane | 45.77 | 44.05 |
| CDY20012 | Canola | plasma membrane | 45.52 | 43.81 |
| CDX94395 | Canola | plasma membrane | 44.69 | 43.68 |
| CDX93393 | Canola | plasma membrane | 44.28 | 43.59 |
| CDY37953 | Canola | plasma membrane | 44.11 | 43.43 |
| CDX92739 | Canola | plasma membrane | 44.36 | 43.11 |
| CDX89380 | Canola | plasma membrane | 44.61 | 42.2 |
| CDY27639 | Canola | plasma membrane | 42.54 | 42.12 |
| CDX86445 | Canola | plasma membrane | 42.37 | 41.08 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 38.14 | 40.53 |
| CDX85192 | Canola | plasma membrane | 42.45 | 40.35 |
| CDY04018 | Canola | plasma membrane | 41.29 | 40.13 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 44.36 | 39.99 |
| CDX79704 | Canola | plasma membrane | 44.44 | 39.97 |
| CDX84896 | Canola | plasma membrane | 32.92 | 37.77 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 28.11 | 34.42 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 39.05 | 33.76 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 39.22 | 33.76 |
| CDY65312 | Canola | cytosol | 39.14 | 33.74 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 39.14 | 33.71 |
| CDY07647 | Canola | cytosol | 39.05 | 33.62 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 38.97 | 33.38 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.49 | 25.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078GF57 | UniProt:A0A078GF57 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY25095 | ProteinID:CDY25095 |
| ProteinID:CDY25095.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00028955001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF292 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EF0D73 | SEG:seg | : | : |
Description
BnaC06g18370DBnaC06g18370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF57]
Coordinates
chrLK032168:-:387852..392887
Molecular Weight (calculated)
130367.0 Da
IEP (calculated)
7.832
GRAVY (calculated)
0.107
Length
1206 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGIMESEEG LKVDSPNRTE AETSNSKTPE KEAKTESVRK DEKTKTVPFH KLFAFADSFD IILMILGTIG AVGNGLGFPI MTILFGDVID VFGQNQNSTD
0101: VSDKIAKVAL KFVYLGLGTL VAALLQVSGW MISGERQAGR IRSLYLKTIL RQDIAFFDVE TNTGEVVGRM SGDTVLIQDA MGEKVGKAIQ LISTFIGGFV
0201: IAFAEGWLLT LVMVSSIPLL VMSGAALAIV ISKMASRGQT SYAKAAVVVE QTVGSIRTVA SFTGEKQAIS SYNKHLVSAY RAGVFEGAST GIGLGTLNVV
0301: IFCTYALAVW YGGKMILEKG YTGGQVLIII FAVLTGSMSL GQASPCLSAF AAGQAAAYKM FETIKRKPEI DASNTTGKVL DDVRGDIELR DVDFSYPARP
0401: EEQIFRGFSL SISSGSTVAL VGQSGSGKST VVSLIERFYD PQSGEVRIDG VNLKEFQLKW IRSKIGLVSQ EPVLFTSSIK ENIAYGKEDA TVEEIRKATE
0501: LANASKFIDK LPQGLDTMVG EHGTQLSGGQ KQRIAVARAI LKDPRILLLD EATSALDAES ERIVQEALDR IMVNRTTVVV AHRLSTVRNA DMIAVIHQGK
0601: IVEKGSHSEL LRDPEGAYSQ LIRLQEDNKK SEDSREEQKV SMESMKRSSL RKSSLSRVIK AFFKPPEQLK SDTSFWAIIF MLLGVASMVV YPAQTIFFSI
0701: AGCKLVQRIR SMCFEKVVHM EVGWFDETEN SSGAIGARLS ADAATVRGLV GDALAQTVQN IASVTAGVVI AFVASWQLAF IVLAMLPLIG LNGYIYMKFM
0801: VGFSADAKRM YEEASQVAND AVGSIRTVAS FCAEEKVMKM YKKKCEGPMK TGIRQGIVSG IGFGVSFFVL FASYAASFYA GARLVDDGKT TFDAVFRVFF
0901: ALTMAAVAIS QSSSLSPDSS KASNAAASIF AVIDRKSKID PSDESGRVLD NVKGDIELRH VSFKYPSRPD VQIFQDLCLS IRAGKKHVFS LTIALVGESG
1001: SGKSTVIALL QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDASETE IISAAELSNA HGFISGLQQG YDTMVGERGV
1101: QLSGGQKQRV AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL
1201: HLSAST
0101: VSDKIAKVAL KFVYLGLGTL VAALLQVSGW MISGERQAGR IRSLYLKTIL RQDIAFFDVE TNTGEVVGRM SGDTVLIQDA MGEKVGKAIQ LISTFIGGFV
0201: IAFAEGWLLT LVMVSSIPLL VMSGAALAIV ISKMASRGQT SYAKAAVVVE QTVGSIRTVA SFTGEKQAIS SYNKHLVSAY RAGVFEGAST GIGLGTLNVV
0301: IFCTYALAVW YGGKMILEKG YTGGQVLIII FAVLTGSMSL GQASPCLSAF AAGQAAAYKM FETIKRKPEI DASNTTGKVL DDVRGDIELR DVDFSYPARP
0401: EEQIFRGFSL SISSGSTVAL VGQSGSGKST VVSLIERFYD PQSGEVRIDG VNLKEFQLKW IRSKIGLVSQ EPVLFTSSIK ENIAYGKEDA TVEEIRKATE
0501: LANASKFIDK LPQGLDTMVG EHGTQLSGGQ KQRIAVARAI LKDPRILLLD EATSALDAES ERIVQEALDR IMVNRTTVVV AHRLSTVRNA DMIAVIHQGK
0601: IVEKGSHSEL LRDPEGAYSQ LIRLQEDNKK SEDSREEQKV SMESMKRSSL RKSSLSRVIK AFFKPPEQLK SDTSFWAIIF MLLGVASMVV YPAQTIFFSI
0701: AGCKLVQRIR SMCFEKVVHM EVGWFDETEN SSGAIGARLS ADAATVRGLV GDALAQTVQN IASVTAGVVI AFVASWQLAF IVLAMLPLIG LNGYIYMKFM
0801: VGFSADAKRM YEEASQVAND AVGSIRTVAS FCAEEKVMKM YKKKCEGPMK TGIRQGIVSG IGFGVSFFVL FASYAASFYA GARLVDDGKT TFDAVFRVFF
0901: ALTMAAVAIS QSSSLSPDSS KASNAAASIF AVIDRKSKID PSDESGRVLD NVKGDIELRH VSFKYPSRPD VQIFQDLCLS IRAGKKHVFS LTIALVGESG
1001: SGKSTVIALL QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDASETE IISAAELSNA HGFISGLQQG YDTMVGERGV
1101: QLSGGQKQRV AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL
1201: HLSAST
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.