Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005036.1-P | Field mustard | mitochondrion | 99.57 | 99.57 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 98.44 | 98.93 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 95.1 | 95.99 |
| CDY07647 | Canola | cytosol | 95.38 | 95.86 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 94.67 | 94.74 |
| CDY65312 | Canola | cytosol | 89.06 | 89.64 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 88.99 | 89.5 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 6.82 | 86.49 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 78.76 | 85.31 |
| KRG92957 | Soybean | nucleus | 84.45 | 84.99 |
| KRH01590 | Soybean | mitochondrion | 84.59 | 84.95 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 84.38 | 84.92 |
| KRH70512 | Soybean | extracellular | 84.38 | 84.74 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 77.2 | 84.59 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 74.36 | 83.63 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 77.77 | 78.16 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 77.63 | 78.02 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 77.84 | 77.9 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 77.56 | 77.45 |
| Os03t0280000-01 | Rice | plasma membrane | 77.41 | 77.25 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 76.63 | 77.13 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 76.78 | 76.94 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 76.92 | 76.86 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 76.85 | 76.79 |
| EER92449 | Sorghum | plasma membrane | 77.06 | 76.79 |
| Zm00001d047780_P002 | Maize | plasma membrane | 77.06 | 76.79 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 76.7 | 76.65 |
| CDX84897 | Canola | cytosol | 3.98 | 47.46 |
| CDX86437 | Canola | cytosol | 4.83 | 45.64 |
| CDY00109 | Canola | plasma membrane | 37.0 | 41.85 |
| CDX86408 | Canola | plasma membrane | 36.72 | 41.79 |
| CDY20012 | Canola | plasma membrane | 37.07 | 41.66 |
| CDX93393 | Canola | plasma membrane | 36.22 | 41.63 |
| CDY37953 | Canola | plasma membrane | 36.08 | 41.47 |
| CDY27639 | Canola | plasma membrane | 35.87 | 41.46 |
| CDY65012 | Canola | plasma membrane | 36.72 | 41.26 |
| CDX92739 | Canola | plasma membrane | 36.29 | 41.18 |
| CDX94395 | Canola | plasma membrane | 36.08 | 41.17 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 32.67 | 40.53 |
| CDX89380 | Canola | plasma membrane | 36.08 | 39.84 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 37.5 | 39.46 |
| CDX79704 | Canola | plasma membrane | 37.57 | 39.45 |
| CDY25095 | Canola | cytosol | 33.38 | 38.97 |
| CDX67881 | Canola | cytosol | 33.17 | 38.88 |
| CDY27510 | Canola | cytosol | 33.1 | 38.87 |
| CDX80072 | Canola | cytosol | 33.03 | 38.81 |
| CDY48003 | Canola | cytosol | 32.81 | 38.76 |
| CDX84896 | Canola | plasma membrane | 28.91 | 38.73 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 33.95 | 38.46 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 29.76 | 38.41 |
| CDY58790 | Canola | peroxisome | 33.38 | 38.18 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 34.23 | 38.13 |
| CDY24379 | Canola | plasma membrane | 31.61 | 38.07 |
| CDX86445 | Canola | plasma membrane | 33.59 | 38.02 |
| CDY15432 | Canola | cytosol | 33.03 | 37.99 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 34.09 | 37.97 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.46 | 37.8 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 34.09 | 37.8 |
| CDY51560 | Canola | peroxisome | 33.52 | 37.73 |
| CDY04018 | Canola | plasma membrane | 33.1 | 37.55 |
| CDX85192 | Canola | plasma membrane | 33.24 | 36.88 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 1.78 | 36.76 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 23.01 | 32.89 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.63 | 31.94 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078IUS3 | UniProt:A0A078IUS3 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | EnsemblPlants:CDY53591 | ProteinID:CDY53591 | ProteinID:CDY53591.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00011039001 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0004EF363F | SEG:seg | : | : | : |
Description
BnaA05g34640DBnaA05g34640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUS3]
Coordinates
chrLK033218:-:23829..30164
Molecular Weight (calculated)
155516.0 Da
IEP (calculated)
5.962
GRAVY (calculated)
0.062
Length
1408 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMVSRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE NGGGAGMATQ AEEDEEMEEQ EEMEPPPAAV PFSQLFACAD RFDWVLMVFG SVAAAAHGTA
0101: LIVYLHYFAK IVEVLAYTAE SGRRIPDDQF NRLVELSLTI VYIAGGVFVS GWIEVSCWIL TGERQTAVIR SKYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSALS EKVGNYIHNM ATFISGLVIG FVNCWEIALI TLATGPFIVA AGGISNIFLH RLAENIQDAY AEAASIAEQA VSYVRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGL GLGFTYGLAI CSCALQLWIG RFFVIHGRAT GGEIITALFA VILSGLGLNQ AATNFYSFDQ GRIAAYRLFE MITRSSSGTN
0401: QEGTTLSAVE GNIEFRNVYF SYLSRPEIPV LSGFYLTVPA KKAVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENIK NLKLEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRDATPDQI EEAAKKARAH TFISSLEKGY ETQVGKAGLT LTEEQKIKLS IARAVLLDPK ILLLDEVTGG LDFEAERVVQ EALDLLMLGR
0601: STIIIARRLS LIRNADYIAV MEEGQLLEMG THDELINLGN LYAELLKCEE ATKLPRRMPV RSYNDAAGFQ PERDSSAGRG FQEPSSPKMA KSPSLQRGHN
0701: VFRPQEMYFN SEESPNDHSP APEKMGENGS SLDVADKEPT IKRQDSFEMR LPELPKIDIQ CPERQKSNGS DPESPISPLL ISDPQNERSH SQTFSRPHGH
0801: SDDTSANVMV AKDSQHKESP SIWKLAQLSF PEWLYAVLGS IGAAVFGSFN PLLAYVIALV VTAYYTSKGS HLREEVDKWC LIIAGMGLVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDE EENSPDTLSM RLANDATFVR AAFSNRLSIL IQDSFAVIVA ILIGLLLGWR LALVALATLP VLTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRLQLQR ILKQSFLHGM AIGFAFGFSQ FLLFACNALL LWYTAFSVHR GYMKLSTALT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLA SVFEIIDRVP TIEPDDTSAL SPPNVYGSIE LKNIDFCYPT RPEVLVLSNF SLKISGGQTL AVVGVSGSGK
1201: STIISLIERY YDPVAGQVFL DGRDLKSYNV RWLRSHMGLI QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLAHGYDTH IGMRGVELTQ
1301: GQKQRIAIAR VVLKNAPILL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGKIVEEGTH DALAGKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: LIVYLHYFAK IVEVLAYTAE SGRRIPDDQF NRLVELSLTI VYIAGGVFVS GWIEVSCWIL TGERQTAVIR SKYVQVLLNQ DMSFFDTYGN NGDIVSQVLS
0201: DVLLIQSALS EKVGNYIHNM ATFISGLVIG FVNCWEIALI TLATGPFIVA AGGISNIFLH RLAENIQDAY AEAASIAEQA VSYVRTLYAF TNETLAKYSY
0301: ATSLQATLRY GILISLVQGL GLGFTYGLAI CSCALQLWIG RFFVIHGRAT GGEIITALFA VILSGLGLNQ AATNFYSFDQ GRIAAYRLFE MITRSSSGTN
0401: QEGTTLSAVE GNIEFRNVYF SYLSRPEIPV LSGFYLTVPA KKAVALVGRN GSGKSSIIPL MERFYDPTLG EVLLDGENIK NLKLEWLRSQ IGLVTQEPAL
0501: LSLSIRENIA YGRDATPDQI EEAAKKARAH TFISSLEKGY ETQVGKAGLT LTEEQKIKLS IARAVLLDPK ILLLDEVTGG LDFEAERVVQ EALDLLMLGR
0601: STIIIARRLS LIRNADYIAV MEEGQLLEMG THDELINLGN LYAELLKCEE ATKLPRRMPV RSYNDAAGFQ PERDSSAGRG FQEPSSPKMA KSPSLQRGHN
0701: VFRPQEMYFN SEESPNDHSP APEKMGENGS SLDVADKEPT IKRQDSFEMR LPELPKIDIQ CPERQKSNGS DPESPISPLL ISDPQNERSH SQTFSRPHGH
0801: SDDTSANVMV AKDSQHKESP SIWKLAQLSF PEWLYAVLGS IGAAVFGSFN PLLAYVIALV VTAYYTSKGS HLREEVDKWC LIIAGMGLVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDE EENSPDTLSM RLANDATFVR AAFSNRLSIL IQDSFAVIVA ILIGLLLGWR LALVALATLP VLTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRLQLQR ILKQSFLHGM AIGFAFGFSQ FLLFACNALL LWYTAFSVHR GYMKLSTALT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLA SVFEIIDRVP TIEPDDTSAL SPPNVYGSIE LKNIDFCYPT RPEVLVLSNF SLKISGGQTL AVVGVSGSGK
1201: STIISLIERY YDPVAGQVFL DGRDLKSYNV RWLRSHMGLI QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLAHGYDTH IGMRGVELTQ
1301: GQKQRIAIAR VVLKNAPILL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGKIVEEGTH DALAGKNGLY VRLMQPHFGK
1401: GLRQHRLI
0001: MMISRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE HGGTGTAAQA DDEEEMEEPE EMEPPPAAVP FSQLFACADR FDWVLMVFGS VAAAAHGTAL
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
Arabidopsis Description
ABCB6ABC transporter B family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPT1]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.