CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plasma membrane, vacuole
Any Predictor:	nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	98.78	78.4
VIT_11s0016g03160.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	68.43	55.02
Solyc03g093650.2.1	Tomato	plasma membrane	64.97	52.16
PGSC0003DMT400048379	Potato	golgi, peroxisome, plasma membrane	59.9	51.89
CDY21871	Canola	endoplasmic reticulum, plasma membrane	3.35	45.83
HORVU3Hr1G068650.8	Barley	peroxisome, plasma membrane	56.75	45.41
CDX86445	Canola	plasma membrane	48.43	38.34
CDY04018	Canola	plasma membrane	47.41	37.63
CDX85192	Canola	plasma membrane	48.43	37.59
CDX84896	Canola	plasma membrane	37.06	34.73
CDX86408	Canola	plasma membrane	38.07	30.32
CDY65012	Canola	plasma membrane	38.48	30.25
CDY20012	Canola	plasma membrane	38.17	30.01
CDY00109	Canola	plasma membrane	37.87	29.96
CDX94395	Canola	plasma membrane	37.16	29.66
CDY37953	Canola	plasma membrane	36.75	29.55
CDY27639	Canola	plasma membrane	36.35	29.39
CDX93393	Canola	plasma membrane	36.55	29.39
CDY20842	Canola	endoplasmic reticulum, golgi, plasma membrane	34.62	29.1
CDX89380	Canola	plasma membrane	37.26	28.78
CDX92739	Canola	plasma membrane	35.94	28.53
CDY58790	Canola	peroxisome	35.43	28.35
CDY51307	Canola	cytosol, peroxisome, plasma membrane	36.24	28.24
CDY24379	Canola	plasma membrane	33.5	28.23
CDX67881	Canola	cytosol	34.42	28.23
CDY27510	Canola	cytosol	34.31	28.19
CDY46744	Canola	cytosol, peroxisome, plasma membrane	38.27	28.18
CDY51560	Canola	peroxisome	35.74	28.14
CDY25095	Canola	cytosol	34.42	28.11
CDY35168	Canola	golgi, peroxisome, plasma membrane	31.07	28.05
CDX80072	Canola	cytosol	34.01	27.96
CDX79704	Canola	plasma membrane	37.97	27.89
CDY15432	Canola	cytosol	34.52	27.78
CDX89963	Canola	cytosol, nucleus, plasma membrane	35.63	27.77
CDY48003	Canola	cytosol	33.6	27.77
CDY15249	Canola	cytosol, peroxisome, plasma membrane	35.63	27.64
CDY37776	Canola	cytosol, peroxisome, plasma membrane	34.52	27.35
CDY42770	Canola	golgi, plasma membrane, vacuole	29.14	25.29
CDY24958	Canola	mitochondrion, plasma membrane, plastid	32.79	23.15
CDY07647	Canola	cytosol	32.89	23.13
CDY20443	Canola	cytosol, mitochondrion, plasma membrane	32.79	23.05
CDY53591	Canola	cytosol, mitochondrion, plasma membrane	32.89	23.01
CDY65312	Canola	cytosol	31.98	22.52
CDX76106	Canola	cytosol, golgi, peroxisome	31.98	22.5
CDX86442	Canola	cytosol, mitochondrion, plastid	0.0	0.0
CDX86437	Canola	cytosol	0.0	0.0
CDX84897	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	GO:A0A078JHR7	UniProt:A0A078JHR7	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY64952	ProteinID:CDY64952
ProteinID:CDY64952.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00043905001	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF228	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EE3E1E	SEG:seg	:	:

Description

BnaA06g39710DBnaA06g39710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHR7]

Coordinates

chrLK034607:+:22240..27428

Molecular Weight (calculated)

108609.0 Da

IEP (calculated)

9.192

GRAVY (calculated)

0.123

Length

985 amino acids

Sequence
(BLAST)

001: MASREKTESV SSKSSCNIHV IFRFADWIDI VLMVLGTVGA IGDGMSTNVA LVFASKIMNS LGYGQNNHHT FKDEVQKCSL YFVYLGLAIL GVAFMEGYCW
101: SKTSERQVEK IRRTYLKAVL RQEVSFFESE DASISEIIHT ISTDTSLIQQ LLSEKVPIFL MHTSVFITGL VFAAYFSWRL TLVAIPSLVL LLIPGLIYGK
201: YLVYLSKKSY KEYAKANSIV EQALSSIKTI LSFTAETQII KSYSEILERH KKLGLKQGLA KGLAVGSTGI SFTIWAFLAW YGSRLVMHKQ ETGGRIYAAG
301: ISFILSGLSL GTALTEIRYF SEASVAAARI CSRIDRVPEI DGEDTTKGII PNAKIEGRVE FEHVTFTYPS RPKSIILKDF TLRADAGRTV ALMGASGSGK
401: STVIALLQRF YDPAEGFVRI DGFDIKTLQL KWMREQIGVV SQDHALFGTS IKENIMFGKD NASMDEVVSA AKAANADEFI TQLPDGYETQ IGDRGGLLSG
501: GQKQRIAIAR AIIRNPVILL LDEATSALDA ESETLIQVSL DQVAAGRTTL VVAHKLSTVR GADLIAVLEN GSVKEMGSHE DLMTKNNHYA KLINIQRQFS
601: SQEHRQDLQD GSKTPEGRQY WSARNSFSRL SIRSTPDLIA SPIPFESIHA AEPDDNLPST SFTRLLPLVS PEWKSSLLGC ISAATFGAIQ PIYALNIGGM
701: ISAFFATSSK QMQDRIRIYS LIFISLTFIS MTLNLIQHYS FAKMGERLMQ RLRLRMLEKI FTFEPAWFDV EENSSGELCS RLSNEASTVK SIVSDRISLL
801: VQTISGVLIA MVIGLLVAWK LALVMIAVQP LSVLCFYTKK VLLTSISRNY AYAQNRSSNI ASEAVYNHKI VTSLGSTKKI IEIFDKAQDE ARRKGKKAAW
901: LAGFGMGSAQ CLTFMTWALD FWYGGVLVEK GEISAGDVFK TFFVLVSTGK VIAEAGSMTS DLAKGSAAIS SVFKILDRPS SQVRY

Best Arabidopsis Sequence Match ( AT3G28345.1 )
(BLAST)

0001: MGKEEEKESG RNKMNCFGSV RSIFMHADGV DWLLMGLGLI GAVGDGFTTP LVLLITSKLM NNIGGSSFNT DTFMQSISKN SVALLYVACG SWVVCFLEGY
0101: CWTRTGERQT ARMREKYLRA VLRQDVGYFD LHVTSTSDVI TSVSSDSFVI QDVLSEKLPN FLMSASTFVG SYIVGFILLW RLAIVGLPFI VLLVIPGLMY
0201: GRALISISRK IREEYNEAGF VAEQAISSVR TVYAFSGERK TISKFSTALQ GSVKLGIKQG LAKGITIGSN GITFAMWGFM SWYGSRMVMY HGAQGGTVFA
0301: VAAAIAIGGV SLGGGLSNLK YFFEAASVGE RIMEVINRVP KIDSDNPDGH KLEKIRGEVE FKNVKFVYPS RLETSIFDDF CLRVPSGKTV ALVGGSGSGK
0401: STVISLLQRF YDPLAGEILI DGVSIDKLQV KWLRSQMGLV SQEPALFATT IKENILFGKE DASMDDVVEA AKASNAHNFI SQLPNGYETQ VGERGVQMSG
0501: GQKQRIAIAR AIIKSPTILL LDEATSALDS ESERVVQEAL ENASIGRTTI LIAHRLSTIR NADVISVVKN GHIVETGSHD ELMENIDGQY STLVHLQQIE
0601: KQDINVSVKI GPISDPSKDI RNSSRVSTLS RSSSANSVTG PSTIKNLSED NKPQLPSFKR LLAMNLPEWK QALYGCISAT LFGAIQPAYA YSLGSMVSVY
0701: FLTSHDEIKE KTRIYALSFV GLAVLSFLIN ISQHYNFAYM GEYLTKRIRE RMLSKVLTFE VGWFDRDENS SGAICSRLAK DANVVRSLVG DRMALVVQTV
0801: SAVTIAFTMG LVIAWRLALV MIAVQPVIIV CFYTRRVLLK SMSKKAIKAQ DESSKLAAEA VSNVRTITAF SSQERIMKML EKAQESPRRE SIRQSWFAGF
0901: GLAMSQSLTS CTWALDFWYG GRLIQDGYIT AKALFETFMI LVSTGRVIAD AGSMTTDLAK GSDAVGSVFA VLDRYTSIDP EDPDGYETER ITGQVEFLDV
1001: DFSYPTRPDV IIFKNFSIKI EEGKSTAIVG PSGSGKSTII GLIERFYDPL KGIVKIDGRD IRSYHLRSLR RHIALVSQEP TLFAGTIREN IIYGGVSDKI
1101: DEAEIIEAAK AANAHDFITS LTEGYDTYCG DRGVQLSGGQ KQRIAIARAV LKNPSVLLLD EATSALDSQS ERVVQDALER VMVGRTSVVI AHRLSTIQNC
1201: DAIAVLDKGK LVERGTHSSL LSKGPTGIYF SLVSLQTTSG

Arabidopsis Description

ABCB15ABC transporter B family member 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.