Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93393 | Canola | plasma membrane | 98.12 | 98.12 |
| Bra019907.1-P | Field mustard | plasma membrane | 97.55 | 97.55 |
| AT1G10680.1 | Thale cress | plasma membrane | 88.98 | 88.83 |
| CDX94395 | Canola | plasma membrane | 80.0 | 79.42 |
| CDX92739 | Canola | plasma membrane | 78.29 | 77.28 |
| CDX89380 | Canola | plasma membrane | 80.24 | 77.1 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 70.78 | 76.39 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 76.33 | 75.22 |
| KRH74394 | Soybean | plasma membrane | 75.27 | 74.0 |
| KRH39563 | Soybean | peroxisome | 75.1 | 73.9 |
| Solyc08g076720.2.1 | Tomato | unclear | 74.53 | 72.63 |
| PGSC0003DMT400045176 | Potato | peroxisome | 74.29 | 72.39 |
| KRH45417 | Soybean | plasma membrane | 73.06 | 71.37 |
| EES05688 | Sorghum | plasma membrane | 72.65 | 70.63 |
| TraesCS6D01G250000.1 | Wheat | golgi | 72.24 | 70.18 |
| TraesCS6A01G264900.3 | Wheat | golgi | 72.41 | 70.06 |
| Os02t0693700-02 | Rice | plasma membrane | 72.24 | 70.02 |
| Zm00001d051514_P002 | Maize | mitochondrion | 72.08 | 69.97 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 71.92 | 69.75 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 51.1 | 65.48 |
| HORVU6Hr1G067200.1 | Barley | plastid | 72.08 | 65.17 |
| CDX84897 | Canola | cytosol | 5.8 | 60.17 |
| CDX86437 | Canola | cytosol | 7.1 | 58.39 |
| CDX86408 | Canola | plasma membrane | 50.45 | 49.96 |
| CDY20012 | Canola | plasma membrane | 50.86 | 49.72 |
| CDY00109 | Canola | plasma membrane | 50.53 | 49.72 |
| CDY65012 | Canola | plasma membrane | 50.45 | 49.32 |
| CDY27639 | Canola | plasma membrane | 47.84 | 48.11 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 2.61 | 47.06 |
| CDX84896 | Canola | plasma membrane | 38.86 | 45.29 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 39.92 | 44.82 |
| CDX67881 | Canola | cytosol | 43.35 | 44.21 |
| CDY25095 | Canola | cytosol | 43.43 | 44.11 |
| CDX80072 | Canola | cytosol | 43.02 | 43.99 |
| CDY27510 | Canola | cytosol | 43.02 | 43.95 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 48.0 | 43.95 |
| CDY48003 | Canola | cytosol | 42.61 | 43.79 |
| CDX79704 | Canola | plasma membrane | 47.76 | 43.62 |
| CDY15432 | Canola | cytosol | 43.35 | 43.38 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 44.73 | 43.35 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 44.82 | 43.23 |
| CDY24379 | Canola | plasma membrane | 41.22 | 43.2 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 44.49 | 43.12 |
| CDY58790 | Canola | peroxisome | 43.27 | 43.05 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 40.65 | 42.49 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 42.86 | 42.24 |
| CDY51560 | Canola | peroxisome | 42.61 | 41.73 |
| CDX86445 | Canola | plasma membrane | 42.04 | 41.4 |
| CDX85192 | Canola | plasma membrane | 41.96 | 40.5 |
| CDY04018 | Canola | plasma membrane | 40.98 | 40.45 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 36.16 | 40.09 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 29.55 | 36.75 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 41.63 | 36.4 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 41.39 | 36.34 |
| CDY07647 | Canola | cytosol | 41.39 | 36.19 |
| CDY65312 | Canola | cytosol | 41.22 | 36.1 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 41.47 | 36.08 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 41.06 | 35.93 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.8 | 30.56 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078HM86 | UniProt:A0A078HM86 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY37953 | ProteinID:CDY37953 | ProteinID:CDY37953.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00064983001 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0004EE62A3 | SEG:seg | : | : | : |
Description
BnaC05g08210DBnaC05g08210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM86]
Coordinates
chrLK032413:+:1297..8164
Molecular Weight (calculated)
134105.0 Da
IEP (calculated)
6.859
GRAVY (calculated)
0.151
Length
1225 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQPSDVSATV AEKKEKEKKR PSVSVFKLFS FADFYDCVLM TLGSIGACIH GASVPVFFIF FGKLINIIGL AYLFPQEASH KVAKYSLDFV YLSVAILFSS
0101: WLEVACWMHT GERQAAKIRK AYLRSMLSQD ISLFDTESST GEVISAITSD ILVVQDALSE KVGNFLHCMS RFTAGFAIGF ASVWQISLVT LSIVPLIAVA
0201: GGIYAYVSTG LLSSVRKSYV KAGEIAEEVI GNVRTVQAFT GEEKAVKSYG EALENTYTYG RKAGLAKGLG LGSMHCVLFL SWALLVWFTS IIVHKGIANG
0301: GESFTTMLNV VIAGLSLGQA APDISTFVRA RAAAYPIFQM IERNKEVKTG RKLGKVEGEI QFRDVTFTYP SRPDVVIFDK LNLVIPAGKV VALVGGSGSG
0401: KSTVISLTER FYEPTDGAVF LDGNDIRYLD LKWLRGHIGL VNQEPALFAT TIRENIMYGK DNATDEEITR AVTLSEAVSF INKLPDGLET QVGERGVQLS
0501: GGQKQRITIS RAILKNPSIL LLDEATSALD AESEKSVQKA LDKVMVGRTT VVVAHRLSTV RNADIIAVVH GGNIIESGSH DELISNPDGA YSSLLRIQQA
0601: ANPNVNHTPS LPVSTEPLPE RPITKTDLSS MDQSVNQPDT TRQGKVTLGR LYSMIRPDWK YGLFGLFGSL VAGSQMPLFA LGISQALVSY YMDWETTQKE
0701: VKRISILFCC ASVITVISHA IEHTTFGIMG ERLTLRVRQM MFSAILRNEI GWFDKVDNTS SMLASQLESD STLLRTIVVD RSTILLENFG LVVTSFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKLFMQG YGVNLNKAYL KANMLAGEAI SNIRTVAAFC AEDKVLELYS NELLEPSERS FRRGQTAGIL YGVSQFFIFS
0901: SYGLALWYGS VLMGQGLSSF ESVMKTFMVL IVTALVMGEV LALAPDILKG NQMVASVFEL LDRRSQVVGD KGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: RDFDLTVPCG KSMALVGQSG SGKSSVLSLI LRFYDPTAGT IMIDGQDIKT LKLKSLRRHV GLVQQEPALF ATTIYENILY GKEGALESEV MEAAKLANAH
1101: DFICSLPEGY STQVGERGIQ MSGGQRQRIA IARAVLKNPA ILLLDEATSA LDVESERVVQ QALDRLMSNR TTVVVAHRLS TIKNSDMISV IQEGKIIEQG
1201: SHNSLIENEN GPYSRLINLQ QHQLS
0101: WLEVACWMHT GERQAAKIRK AYLRSMLSQD ISLFDTESST GEVISAITSD ILVVQDALSE KVGNFLHCMS RFTAGFAIGF ASVWQISLVT LSIVPLIAVA
0201: GGIYAYVSTG LLSSVRKSYV KAGEIAEEVI GNVRTVQAFT GEEKAVKSYG EALENTYTYG RKAGLAKGLG LGSMHCVLFL SWALLVWFTS IIVHKGIANG
0301: GESFTTMLNV VIAGLSLGQA APDISTFVRA RAAAYPIFQM IERNKEVKTG RKLGKVEGEI QFRDVTFTYP SRPDVVIFDK LNLVIPAGKV VALVGGSGSG
0401: KSTVISLTER FYEPTDGAVF LDGNDIRYLD LKWLRGHIGL VNQEPALFAT TIRENIMYGK DNATDEEITR AVTLSEAVSF INKLPDGLET QVGERGVQLS
0501: GGQKQRITIS RAILKNPSIL LLDEATSALD AESEKSVQKA LDKVMVGRTT VVVAHRLSTV RNADIIAVVH GGNIIESGSH DELISNPDGA YSSLLRIQQA
0601: ANPNVNHTPS LPVSTEPLPE RPITKTDLSS MDQSVNQPDT TRQGKVTLGR LYSMIRPDWK YGLFGLFGSL VAGSQMPLFA LGISQALVSY YMDWETTQKE
0701: VKRISILFCC ASVITVISHA IEHTTFGIMG ERLTLRVRQM MFSAILRNEI GWFDKVDNTS SMLASQLESD STLLRTIVVD RSTILLENFG LVVTSFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKLFMQG YGVNLNKAYL KANMLAGEAI SNIRTVAAFC AEDKVLELYS NELLEPSERS FRRGQTAGIL YGVSQFFIFS
0901: SYGLALWYGS VLMGQGLSSF ESVMKTFMVL IVTALVMGEV LALAPDILKG NQMVASVFEL LDRRSQVVGD KGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: RDFDLTVPCG KSMALVGQSG SGKSSVLSLI LRFYDPTAGT IMIDGQDIKT LKLKSLRRHV GLVQQEPALF ATTIYENILY GKEGALESEV MEAAKLANAH
1101: DFICSLPEGY STQVGERGIQ MSGGQRQRIA IARAVLKNPA ILLLDEATSA LDVESERVVQ QALDRLMSNR TTVVVAHRLS TIKNSDMISV IQEGKIIEQG
1201: SHNSLIENEN GPYSRLINLQ QHQLS
0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
Arabidopsis Description
ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.