Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G291900.1 | Wheat | peroxisome | 91.32 | 69.12 |
| TraesCS6D01G250000.1 | Wheat | golgi | 91.11 | 69.07 |
| TraesCS6A01G264900.3 | Wheat | golgi | 91.32 | 68.96 |
| EES05688 | Sorghum | plasma membrane | 86.82 | 65.87 |
| Zm00001d051514_P002 | Maize | mitochondrion | 86.19 | 65.29 |
| HORVU6Hr1G067200.1 | Barley | plastid | 91.95 | 64.87 |
| Os02t0693700-02 | Rice | plasma membrane | 84.31 | 63.77 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 72.18 | 55.51 |
| KRH74394 | Soybean | plasma membrane | 71.23 | 54.65 |
| KRH39563 | Soybean | peroxisome | 71.13 | 54.62 |
| Solyc08g076720.2.1 | Tomato | unclear | 70.4 | 53.54 |
| PGSC0003DMT400045176 | Potato | peroxisome | 69.87 | 53.14 |
| CDX94395 | Canola | plasma membrane | 67.78 | 52.51 |
| Bra013936.1-P | Field mustard | plasma membrane | 67.68 | 52.43 |
| AT4G25960.1 | Thale cress | plasma membrane | 69.56 | 52.24 |
| AT1G10680.1 | Thale cress | plasma membrane | 66.95 | 52.16 |
| KRH45417 | Soybean | plasma membrane | 67.68 | 51.59 |
| CDY37953 | Canola | plasma membrane | 65.48 | 51.1 |
| CDX93393 | Canola | plasma membrane | 65.38 | 51.02 |
| CDX89380 | Canola | plasma membrane | 67.89 | 50.9 |
| Bra019135.1-P | Field mustard | plasma membrane | 65.9 | 50.77 |
| Bra019907.1-P | Field mustard | plasma membrane | 64.96 | 50.69 |
| CDX92739 | Canola | plasma membrane | 65.48 | 50.44 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 56.17 | 47.31 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 5.33 | 45.95 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 50.52 | 38.12 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 49.58 | 37.32 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 43.2 | 35.88 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 39.85 | 34.92 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 44.25 | 33.44 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 44.04 | 33.36 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 48.85 | 33.1 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 43.72 | 33.04 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 43.1 | 32.83 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 43.1 | 32.83 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 43.62 | 32.76 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 43.93 | 32.74 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 43.1 | 32.19 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 40.69 | 31.6 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 39.54 | 29.81 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 41.11 | 27.89 |
| HORVU3Hr1G117180.10 | Barley | plastid | 36.61 | 24.56 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 34.2 | 23.51 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 19.98 | 17.29 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287UHX9 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU6Hr1G067170 | EnsemblPlants:HORVU6Hr1G067170.3 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | PIRSF:PIRSF002773 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000B46FD59 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:465569726..465572966
Molecular Weight (calculated)
104995.0 Da
IEP (calculated)
9.486
GRAVY (calculated)
0.015
Length
956 amino acids
Sequence
(BLAST)
(BLAST)
001: SKELATFKSV MKSFMVLIVT ALAMGETLAM APDIIKGNQM ASSVFEILDR KTEVQIDTGD DIKKVEGVIQ LRDVEFRYPS RSEVAVFKGL DLLMKAGKSM
101: ALVGMSGSGK STVVSLIERF YEPLSGAILL DGHDIKDLDV KWLRGQIGLV NQEPALFATS IRENILYGKS DATADEINHA AKLSEAITFI NNLPERYETQ
201: VGERGIQLSG GQKQRIAISR AILKNPSILL LDEATSALDA ESEKSVQEAL DRVMVGRTTV VIAHRLSTIR NADTIAVVDG GRIVETGTHE QLMGDPLSAY
301: SSLIQLQEAA QLQHKPSFSH STSITRPLSF KYSRELSRTS RGGSFRSDKD SISRYGAAEL NDEGHSKGKP VSMKKLYSMV RPDWVFGVSG TISAFVAGAQ
401: MPLFALGVTQ ALVSYYMGWE TTKREVRKIA TLFCCGAVLT VVFHVIEHLS FGIMGERLTL RVREKMFAAI LRNEIGWFDS TSHTSAMLAS RLETDATLVR
501: TIVVDRSTIL LQNVGMIVTS LIIAFILNWR ITLVVLATYP LMVSGHISEK MFMKGYGGNL GKSYLKANML AAEAVSNMRT VAAFCAEEKV IKLYADELKE
601: PGKRSFRRGQ GAGVFYGVSQ FFLFSSYALA LWYGSQLMSK ELATFKSVMK SFMVLIVTAL AMGETLAMAP DIIKGNQMAS SVFEILDRKT EVQIDTGDDI
701: KKVEGVIQLR DVEFRYPSRS EVAVFKGLDL LMKAGKSMAL VGMSGSGKST VLSLILRFYD PIAGKVLIDG KDIKKLRLKS LRRHIGLVQQ EPALFATTIY
801: ENILYGKDGA TEAEVVEAAK LANAHTFISS LPEGYQTKVG ERGVQLSGGQ KQRIAIARAI VKDPAILLLD EATSALDVES ERVVQQALDR VMKNRTTVMV
901: AHRLSTIKNA DVISVIQDGK IIEQGDHQHL IENKNGAYHK LVNLQQQQQL QGGQSS
101: ALVGMSGSGK STVVSLIERF YEPLSGAILL DGHDIKDLDV KWLRGQIGLV NQEPALFATS IRENILYGKS DATADEINHA AKLSEAITFI NNLPERYETQ
201: VGERGIQLSG GQKQRIAISR AILKNPSILL LDEATSALDA ESEKSVQEAL DRVMVGRTTV VIAHRLSTIR NADTIAVVDG GRIVETGTHE QLMGDPLSAY
301: SSLIQLQEAA QLQHKPSFSH STSITRPLSF KYSRELSRTS RGGSFRSDKD SISRYGAAEL NDEGHSKGKP VSMKKLYSMV RPDWVFGVSG TISAFVAGAQ
401: MPLFALGVTQ ALVSYYMGWE TTKREVRKIA TLFCCGAVLT VVFHVIEHLS FGIMGERLTL RVREKMFAAI LRNEIGWFDS TSHTSAMLAS RLETDATLVR
501: TIVVDRSTIL LQNVGMIVTS LIIAFILNWR ITLVVLATYP LMVSGHISEK MFMKGYGGNL GKSYLKANML AAEAVSNMRT VAAFCAEEKV IKLYADELKE
601: PGKRSFRRGQ GAGVFYGVSQ FFLFSSYALA LWYGSQLMSK ELATFKSVMK SFMVLIVTAL AMGETLAMAP DIIKGNQMAS SVFEILDRKT EVQIDTGDDI
701: KKVEGVIQLR DVEFRYPSRS EVAVFKGLDL LMKAGKSMAL VGMSGSGKST VLSLILRFYD PIAGKVLIDG KDIKKLRLKS LRRHIGLVQQ EPALFATTIY
801: ENILYGKDGA TEAEVVEAAK LANAHTFISS LPEGYQTKVG ERGVQLSGGQ KQRIAIARAI VKDPAILLLD EATSALDVES ERVVQQALDR VMKNRTTVMV
901: AHRLSTIKNA DVISVIQDGK IIEQGDHQHL IENKNGAYHK LVNLQQQQQL QGGQSS
0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP
Arabidopsis Description
ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.