Factsheet for Bra019135.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42770	Canola	golgi, plasma membrane, vacuole	90.01	98.41
Bra013936.1-P	Field mustard	plasma membrane	87.67	88.17
AT4G25960.1	Thale cress	plasma membrane	87.43	85.23
Bra019907.1-P	Field mustard	plasma membrane	76.31	77.31
VIT_02s0012g01660.t01	Wine grape	plasma membrane	75.26	75.14
KRH74394	Soybean	plasma membrane	74.13	73.84
KRH39563	Soybean	peroxisome	73.81	73.57
KRH45417	Soybean	plasma membrane	73.17	72.41
Solyc08g076720.2.1	Tomato	unclear	73.33	72.39
PGSC0003DMT400045176	Potato	peroxisome	73.01	72.08
EES05688	Sorghum	plasma membrane	72.12	71.03
Zm00001d051514_P002	Maize	mitochondrion	71.39	70.21
Os02t0693700-02	Rice	plasma membrane	71.31	70.02
TraesCS6B01G291900.1	Wheat	peroxisome	71.07	69.83
TraesCS6A01G264900.3	Wheat	golgi	71.15	69.75
TraesCS6D01G250000.1	Wheat	golgi	70.83	69.71
HORVU6Hr1G067170.3	Barley	endoplasmic reticulum, vacuole	50.77	65.9
Bra032855.1-P	Field mustard	cytosol	6.2	65.25
HORVU6Hr1G067200.1	Barley	plastid	70.99	65.02
Bra025359.1-P	Field mustard	plasma membrane	49.32	48.88
Bra032856.1-P	Field mustard	plasma membrane	48.67	48.75
Bra039042.1-P	Field mustard	plasma membrane	49.15	48.72
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.59	45.07
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.43	44.88
Bra012621.1-P	Field mustard	plasma membrane	43.92	43.7
Bra003445.1-P	Field mustard	peroxisome	43.43	42.98
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.0	42.79
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.3	42.65
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.0	42.26
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.03	42.18
Bra004484.1-P	Field mustard	cytosol	43.59	42.13
Bra040475.1-P	Field mustard	cytosol	43.67	42.11
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	35.94	41.72
Bra025326.1-P	Field mustard	plasma membrane	41.66	41.56
Bra025331.1-P	Field mustard	plasma membrane	37.07	40.39
GSMUA_Achr4P17010_001	Banana	peroxisome	34.97	39.28
Bra017539.1-P	Field mustard	plasma membrane	32.55	39.19
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	39.16	39.16
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	41.42	36.64
Bra005036.1-P	Field mustard	mitochondrion	41.42	36.51
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	40.61	36.0

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra019135	EnsemblPlants:Bra019135.1	EnsemblPlants:Bra019135.1-P	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
UniProt:M4DRJ2	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF415	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	UniParc:UPI0002541155	SEG:seg	:	:	:

Description

AT4G25960 (E=0.0) PGP2 | PGP2 (P-GLYCOPROTEIN 2); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA03:+:26140033..26145645

Molecular Weight (calculated)

136314.0 Da

IEP (calculated)

7.933

GRAVY (calculated)

0.140

Length

1241 amino acids

Sequence
(BLAST)

0001: MEPSDDLATE VEKEKKAATP KVSFLKLFSF ADFNDCVLMT LGSIGACIHG ASVPVFFIFF GKLINIIGIA YMDRHQASHK VAKYSLDFVY LSVAILFSSW
0101: LEAACWMHTG ERQAAKMRRA YLRSILSQDI SLFDTEASSG EVISAITSDI LVVQDALSEK VGNFLHYISR FIAGFAIGFT SVWQISLVTL AIVPLIALAG
0201: GFYAFVAIGL ISRVRKSYIK AGQVAEEVIG NVRTVQAFTG EERAAKLYRE ALKNTYKYGR KAGLIKGLGL GSLHCVLFLS WALLVWFTSV VVHKGIANAG
0301: ESFTTMLNVV IAGLSLGQAA PDISAFVRAK ASAHPIFQMI ERDTAAKTSA KSGRKLSKVD GHIQFTDVTF SYPSRPDVVI FDKLNLAIPA GKTVALVGGS
0401: GSGKSTVISL IERFYEPTSG AVLLDGSDIK ELDIKWLRGH IGLVSQEPAL FATTIRENIM YGKDDATDEE IGRAAKLSEA FSFINNLPEG FETQVGERGI
0501: QLSGGQKQRI AISRAILKNP SILLLDEATS ALDAESEKSV QEALEGVMVG RTTVVVAHRL STVRNADVIA VVHEGKIVEF GNHENLVSNP DGAYSALLRL
0601: QEAASLECNP SLDRTLSRPH NIQYSREQSR TSSCLEKESV TREDGEDQSK EAKVTMRRLY SMIRPDWLYG ICGTLCAFIA GSLMPLFALG VSHSLVSYYE
0701: KGWDNTQIEV KKIAILFCFA SAITLIVYTI EHLCFGIMGE RLTRRVREKM FLAILKNEMG WFDEVDNTSS MLASRLESDA TLLKTIVVDR STILLQNLGL
0801: VVTSFVISFM LNWRLTLVVL ATYPLVISGH ISEKLFMQGY GGNLSKAYLK ANMLAGESVS NIRTVAAFCA EEKVLELYSK ELLEPSKRSF RRGQTAGLFY
0901: GISQFFIFSS YGLALWYGST LMDNKISSFK SLMKTFMVLI VTSLAMGETL ALAPDLLKGN QMIASVFEIL DRKGQLVGET SEELTNVEGT IELKGIQFSY
1001: PSRPNVVIFK DFDLIVRSGQ SMALVGQSGS GKSSVISLIL RFYDPTAGTI MIEGKDIKKL DLKALRKHIG LIQQEPALFA TTIYENILYG NEEASHSEVI
1101: ESAMFANAHS FITSLPEGYN TKVGERGVQM SGGQRQRIAI ARAILRNPEI LLLDEATSAL DTESERVVQQ ALDRLMTNRT TVVIAHRLST IKNADTISVL
1201: HGGKIVQQGS HRWLVLNKVG PYFNLFNLQQ QPAATTSLNT I

Best Arabidopsis Sequence Match ( AT4G25960.1 )
(BLAST)

0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP

Arabidopsis Description

ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.