Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G264900.3 | Wheat | golgi | 98.65 | 98.26 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 98.18 | 98.02 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 69.07 | 91.11 |
| EES05688 | Sorghum | plasma membrane | 90.56 | 90.63 |
| Zm00001d051514_P002 | Maize | mitochondrion | 89.77 | 89.7 |
| Os02t0693700-02 | Rice | plasma membrane | 89.77 | 89.56 |
| HORVU6Hr1G067200.1 | Barley | plastid | 96.19 | 89.52 |
| VIT_02s0012g01660.t01 | Wine grape | plasma membrane | 74.78 | 75.86 |
| KRH74394 | Soybean | plasma membrane | 73.91 | 74.8 |
| KRH39563 | Soybean | peroxisome | 73.75 | 74.7 |
| PGSC0003DMT400045176 | Potato | peroxisome | 73.04 | 73.27 |
| AT1G10680.1 | Thale cress | plasma membrane | 71.21 | 73.19 |
| CDX94395 | Canola | plasma membrane | 71.61 | 73.18 |
| Solyc08g076720.2.1 | Tomato | unclear | 72.88 | 73.11 |
| Bra013936.1-P | Field mustard | plasma membrane | 71.45 | 73.01 |
| AT4G25960.1 | Thale cress | plasma membrane | 73.2 | 72.51 |
| CDY37953 | Canola | plasma membrane | 70.18 | 72.24 |
| CDX93393 | Canola | plasma membrane | 70.1 | 72.16 |
| Bra019907.1-P | Field mustard | plasma membrane | 69.63 | 71.67 |
| KRH45417 | Soybean | plasma membrane | 70.9 | 71.29 |
| CDX89380 | Canola | plasma membrane | 71.77 | 70.98 |
| CDX92739 | Canola | plasma membrane | 69.71 | 70.83 |
| Bra019135.1-P | Field mustard | plasma membrane | 69.71 | 70.83 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 62.41 | 69.34 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.83 | 50.75 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 50.44 | 50.04 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 32.28 | 44.77 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 48.61 | 44.58 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 43.14 | 43.52 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 42.35 | 43.34 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 43.38 | 42.87 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 42.66 | 42.63 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 42.03 | 42.3 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.82 | 42.22 |
| TraesCS3D01G257500.1 | Wheat | plasma membrane | 41.71 | 41.88 |
| GSMUA_Achr4P17010_001 | Banana | peroxisome | 36.64 | 41.81 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 41.63 | 41.73 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.63 | 41.37 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 41.08 | 41.14 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.08 | 40.95 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 38.7 | 38.64 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 38.54 | 38.63 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 38.46 | 38.37 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 37.43 | 37.61 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 41.71 | 37.38 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 41.0 | 36.69 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 39.25 | 33.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF415 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G250000 | EnsemblPlants:TraesCS6D01G250000.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:353346406..353352989
Molecular Weight (calculated)
138063.0 Da
IEP (calculated)
9.775
GRAVY (calculated)
0.084
Length
1261 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSSVHGAGQ NQSEAGGGGG DNGRKKAGAD EKVEKVPFLK LFSFADRWDY LLMAVGSVGA CAHGASVPVF FIFFGKLINI IGIASFFPAM VSGRVAKYSL
0101: DFVYLGVVIL FSSWTEVACW MHTGERQAAK MRLAYLRSML DQDIAVFDTE ASTGEVINAI TSDVLVVQDA ISEKVGNFMH YISRFLAGFA IGFSRVWQIS
0201: LVTLAIVPLI AIAGGTYAYV TIGLMARVRK SYVKAGEIAE EVIGNVRTVQ AFVGEEKAVR TYREALLRTY KYGKRGGLAK GLGLGSMHSV LFLSWALLVW
0301: FTGIVVHKRI SNGGESFTTM LNVVIAGLSL GQAAPNISTF LRARTAAYPI FQMIERSSRA GRTLQAVEGN IHFRDVRFAY PSRPDVVILD RLSLDFPAGK
0401: IVALVGGSGS GKSTVVSLIE RFYEPLSGAV LLDGHDIKDL DVKWLRGQIG LVNQEPALFA TSIRENILYG KSNATADEID HAAKLSEAIT FINNLPERYE
0501: TQVGERGIQL SGGQKQRIAI SRAILKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVIAHRLST IRNADTIAVV DGGRIVETGT HEQLMANPLS
0601: AYSSLIQLQE AAQHQRKPSF SHSTSITRPL SFKYSRELSR TSRGGSFRSD KDSISRYGGV EANDEGQGKG KPVSMKKLYS MVRPDWVFGV SGTISAFVAG
0701: AQMPLFALGV TQALVSYYMG WETTKREVRK IATLFCCGAV LTVVFHVIEH LSFGIMGERL TLRVREKMFA AILRNEIGWF DSTSHTSSML ASRLETDATL
0801: VRTIVVDRST ILLQNVGMIV TSLIIAFILN WRITLVVLAT YPLMVSGHIS EKMFMKGYGG NLGKSYLKAN MLAAEAVSNM RTVAAFCAEE KVIKLYADEL
0901: KEPGKRSFRR GQGAGVFYGV SQFFLFSSYA LALWYGSHLM SKELATFRSV MKSFMVLIVT ALAMGETLAM APDIIKGNQM ASSVFEILDR KTEVQIDTGD
1001: DIKKVEGVIQ LRDVEFRYPS RSEVAVFKGL DLLMKAGKSM ALVGMSGSGK STVLSLILRF YDPIAGKVLI DGKDIKKLKL KSLRRHIGLV QQEPALFATT
1101: IYENILYGKD GATEAEVIEA AKLANAHTFI SSLPEGYQTK VGERGVQLSG GQKQRIAIAR AIVKDPAILL LDEATSALDM ESERVVQQAL DRVMKNRTTV
1201: MVAHRLSTIK NADVISVIQD GKIIEQGDHQ HLIENKNGAY HKLVNLQQQQ QQQQLQEGQS S
0101: DFVYLGVVIL FSSWTEVACW MHTGERQAAK MRLAYLRSML DQDIAVFDTE ASTGEVINAI TSDVLVVQDA ISEKVGNFMH YISRFLAGFA IGFSRVWQIS
0201: LVTLAIVPLI AIAGGTYAYV TIGLMARVRK SYVKAGEIAE EVIGNVRTVQ AFVGEEKAVR TYREALLRTY KYGKRGGLAK GLGLGSMHSV LFLSWALLVW
0301: FTGIVVHKRI SNGGESFTTM LNVVIAGLSL GQAAPNISTF LRARTAAYPI FQMIERSSRA GRTLQAVEGN IHFRDVRFAY PSRPDVVILD RLSLDFPAGK
0401: IVALVGGSGS GKSTVVSLIE RFYEPLSGAV LLDGHDIKDL DVKWLRGQIG LVNQEPALFA TSIRENILYG KSNATADEID HAAKLSEAIT FINNLPERYE
0501: TQVGERGIQL SGGQKQRIAI SRAILKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVIAHRLST IRNADTIAVV DGGRIVETGT HEQLMANPLS
0601: AYSSLIQLQE AAQHQRKPSF SHSTSITRPL SFKYSRELSR TSRGGSFRSD KDSISRYGGV EANDEGQGKG KPVSMKKLYS MVRPDWVFGV SGTISAFVAG
0701: AQMPLFALGV TQALVSYYMG WETTKREVRK IATLFCCGAV LTVVFHVIEH LSFGIMGERL TLRVREKMFA AILRNEIGWF DSTSHTSSML ASRLETDATL
0801: VRTIVVDRST ILLQNVGMIV TSLIIAFILN WRITLVVLAT YPLMVSGHIS EKMFMKGYGG NLGKSYLKAN MLAAEAVSNM RTVAAFCAEE KVIKLYADEL
0901: KEPGKRSFRR GQGAGVFYGV SQFFLFSSYA LALWYGSHLM SKELATFRSV MKSFMVLIVT ALAMGETLAM APDIIKGNQM ASSVFEILDR KTEVQIDTGD
1001: DIKKVEGVIQ LRDVEFRYPS RSEVAVFKGL DLLMKAGKSM ALVGMSGSGK STVLSLILRF YDPIAGKVLI DGKDIKKLKL KSLRRHIGLV QQEPALFATT
1101: IYENILYGKD GATEAEVIEA AKLANAHTFI SSLPEGYQTK VGERGVQLSG GQKQRIAIAR AIVKDPAILL LDEATSALDM ESERVVQQAL DRVMKNRTTV
1201: MVAHRLSTIK NADVISVIQD GKIIEQGDHQ HLIENKNGAY HKLVNLQQQQ QQQQLQEGQS S
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.