Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 98.97 | 98.89 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 99.28 | 98.42 |
| KXG33192 | Sorghum | cytosol | 85.59 | 84.71 |
| Zm00001d043762_P001 | Maize | cytosol | 85.67 | 84.52 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 82.88 | 82.75 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 80.81 | 81.01 |
| TraesCS6D01G107600.1 | Wheat | cytosol, plasma membrane, vacuole | 53.58 | 74.04 |
| TraesCS3D01G257900.1 | Wheat | peroxisome | 73.41 | 73.06 |
| TraesCS3D01G258100.1 | Wheat | plasma membrane | 70.78 | 71.12 |
| TraesCS1D01G374300.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.51 | 68.79 |
| TraesCS3D01G258300.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.79 | 68.3 |
| TraesCS3D01G258200.2 | Wheat | peroxisome | 66.96 | 66.8 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.05 | 63.88 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 62.58 | 63.85 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 48.33 | 62.26 |
| Bra012621.1-P | Field mustard | plasma membrane | 61.39 | 61.83 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 60.43 | 61.26 |
| Solyc02g071350.2.1 | Tomato | plastid | 61.54 | 61.2 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 61.47 | 61.17 |
| KRH11119 | Soybean | plasma membrane | 60.51 | 60.95 |
| KRH21125 | Soybean | plasma membrane | 60.91 | 60.67 |
| AT4G18050.2 | Thale cress | plasma membrane | 60.03 | 60.51 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 60.43 | 60.0 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 59.87 | 59.54 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 51.51 | 59.3 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.48 | 58.72 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 58.84 | 58.7 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 58.84 | 57.92 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 57.96 | 57.82 |
| AT5G46540.1 | Thale cress | golgi | 56.77 | 57.13 |
| Bra017539.1-P | Field mustard | plasma membrane | 44.43 | 54.12 |
| TraesCS2D01G523100.2 | Wheat | cytosol | 44.27 | 43.75 |
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.47 | 43.23 |
| TraesCS6D01G250000.1 | Wheat | golgi | 41.88 | 41.71 |
| TraesCS7D01G068400.1 | Wheat | plasma membrane | 40.68 | 41.48 |
| TraesCS2D01G339000.1 | Wheat | plasma membrane | 38.38 | 38.16 |
| TraesCS7D01G284100.1 | Wheat | cytosol | 41.48 | 37.89 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 37.18 | 37.21 |
| TraesCS7D01G298600.1 | Wheat | peroxisome | 37.18 | 37.12 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 37.02 | 36.79 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 38.69 | 34.54 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 38.14 | 34.0 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 38.69 | 32.4 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G257500 | EnsemblPlants:TraesCS3D01G257500.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:359673233..359679819
Molecular Weight (calculated)
135752.0 Da
IEP (calculated)
6.616
GRAVY (calculated)
0.097
Length
1256 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAAKGRDG EEKKEGGHGK RVSFTGMFRY ADRTDQLLML VGTLAALANG VSQPLMTVIF GDMIDAFGGA TSDNVLHRVN KAVLSFVYLG IGTAVVSFLQ
0101: VACWTITGER QATRVRSLYL KSVLRQDISF FDVEMTTGQI VSRMSGDTVL VQDAIGEKVG KFLQLVATFI GGFVVAFVKG WLLSLVMLAC IPPVVIAGGA
0201: VAKVLSTISS KGQESYSDAA NVVEQTIGSI KTVASFNGEK QAIGDYNKLI NKAYKTTVKE GLANGFGMGS VFFIFFSSYG LAIWYGGKLI LTKGYTGGEV
0301: ISILFAIMTG AMSLGNATPC MTAFAEGQSA AHRLFTTIKR KPEIDPDDKT GRQLEDIKGD VELRDVYFSY PARPEQLIFD GFSLHVSSGT TMAIVGESGS
0401: GKSTVISLVE RFYDPQAGEV LIDGINIKSL QLDSVRGKIG LVSQEPLLFM TSIKDNITYG KEGATIEEIK RAAELSNAAN FIDKLPNGYD TMVGQRGAQL
0501: SGGQKQRIAI ARAIIKNPKI LLLDEATSAL DVESERIVQE ALNRIMVDRT TLVVAHRLTT VRNADCISVV QQGKIVEQGP HDELVVNPDG AYSQLIRLQE
0601: HNEEEQKVDH RRLDPRSKST SLSLKRSISR GSAGNSSRNS FNLSFGLPGA VELPEGNDTH GENHTEQDGE VPKKAPMGRL ALLNKPEVLI ILLGSLAAAV
0701: HGVLFPMFGV MISSAIKTFY EPPDKLRKDS SFWGLMCVVL GIISIISIPA ELFLFGIAGG KLIERIRAMS FRSIVHQEVA WFDDPKNSSG ALGARLSVDA
0801: LNVRRLVGDN LALTVQIIST LITGFVIAMI ADWKLSLIIL CVIPLVGLQG YAQVKFLKGF SQDAKMMYED ASQVATDAIS SIRTVASFCS EKRITRIYDD
0901: KCEASMSQGV RTGVVGGIGF GFSFLMLYLT YGLCFYVGAQ FVRHGQSSFG DVFKVFFALV LATIGVSQTS AMATDSTKAK DSAISIFALL DRKSEIDSSR
1001: NEGLTLDEVK GNIDFQHVSF KYPTRPDIQI FSDFTLHIPS GKTVALVGES GSGKSTVIGL LERFYNPDSG TISLDGVEIK SLNINWLRDQ TGLVSQEPVL
1101: FNDTIRANIA YGKDGEVTEE ELIAAAKASN AHEFISSLPQ GYDTTVGERG IQLSGGQKQR VAIARAILKD PKILLLDEAT SALDAESERI VQDALDNVMV
1201: GRTTVVVAHR LSTIKGADII AVLKDGAIVE KGRHEVLMNI KDGVYASLVE LRSASS
0101: VACWTITGER QATRVRSLYL KSVLRQDISF FDVEMTTGQI VSRMSGDTVL VQDAIGEKVG KFLQLVATFI GGFVVAFVKG WLLSLVMLAC IPPVVIAGGA
0201: VAKVLSTISS KGQESYSDAA NVVEQTIGSI KTVASFNGEK QAIGDYNKLI NKAYKTTVKE GLANGFGMGS VFFIFFSSYG LAIWYGGKLI LTKGYTGGEV
0301: ISILFAIMTG AMSLGNATPC MTAFAEGQSA AHRLFTTIKR KPEIDPDDKT GRQLEDIKGD VELRDVYFSY PARPEQLIFD GFSLHVSSGT TMAIVGESGS
0401: GKSTVISLVE RFYDPQAGEV LIDGINIKSL QLDSVRGKIG LVSQEPLLFM TSIKDNITYG KEGATIEEIK RAAELSNAAN FIDKLPNGYD TMVGQRGAQL
0501: SGGQKQRIAI ARAIIKNPKI LLLDEATSAL DVESERIVQE ALNRIMVDRT TLVVAHRLTT VRNADCISVV QQGKIVEQGP HDELVVNPDG AYSQLIRLQE
0601: HNEEEQKVDH RRLDPRSKST SLSLKRSISR GSAGNSSRNS FNLSFGLPGA VELPEGNDTH GENHTEQDGE VPKKAPMGRL ALLNKPEVLI ILLGSLAAAV
0701: HGVLFPMFGV MISSAIKTFY EPPDKLRKDS SFWGLMCVVL GIISIISIPA ELFLFGIAGG KLIERIRAMS FRSIVHQEVA WFDDPKNSSG ALGARLSVDA
0801: LNVRRLVGDN LALTVQIIST LITGFVIAMI ADWKLSLIIL CVIPLVGLQG YAQVKFLKGF SQDAKMMYED ASQVATDAIS SIRTVASFCS EKRITRIYDD
0901: KCEASMSQGV RTGVVGGIGF GFSFLMLYLT YGLCFYVGAQ FVRHGQSSFG DVFKVFFALV LATIGVSQTS AMATDSTKAK DSAISIFALL DRKSEIDSSR
1001: NEGLTLDEVK GNIDFQHVSF KYPTRPDIQI FSDFTLHIPS GKTVALVGES GSGKSTVIGL LERFYNPDSG TISLDGVEIK SLNINWLRDQ TGLVSQEPVL
1101: FNDTIRANIA YGKDGEVTEE ELIAAAKASN AHEFISSLPQ GYDTTVGERG IQLSGGQKQR VAIARAILKD PKILLLDEAT SALDAESERI VQDALDNVMV
1201: GRTTVVVAHR LSTIKGADII AVLKDGAIVE KGRHEVLMNI KDGVYASLVE LRSASS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.