Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 4
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:cytosol, plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400034908 Potato plasma membrane 95.31 95.31
TraesCS6B01G145800.1 Wheat cytosol 14.3 71.15
Os01t0695800-01 Rice plasma membrane 14.46 69.47
VIT_10s0003g02540.t01 Wine grape plasma membrane 64.89 66.37
VIT_10s0003g02550.t01 Wine grape cytosol, nucleus, peroxisome 28.28 65.32
Solyc02g071350.2.1 Tomato plastid 64.81 64.61
VIT_10s0003g02570.t01 Wine grape plasma membrane 63.15 64.16
KRH21125 Soybean plasma membrane 63.3 63.2
Bra012621.1-P Field mustard plasma membrane 62.19 62.79
KRH11119 Soybean plasma membrane 62.03 62.63
CDY35168 Canola golgi, peroxisome, plasma membrane 53.77 62.05
VIT_10s0003g02580.t01 Wine grape plasma membrane 62.11 61.82
AT4G18050.2 Thale cress plasma membrane 60.92 61.56
Solyc02g071340.1.1 Tomato plasma membrane 61.32 61.12
HORVU3Hr1G021600.2 Barley peroxisome, plasma membrane, vacuole 54.49 59.6
TraesCS3A01G117600.3 Wheat peroxisome, plasma membrane 54.73 59.29
AT5G46540.1 Thale cress golgi 58.3 58.81
Os05t0548300-01 Rice plasma membrane 27.09 58.59
GSMUA_Achr2P20180_001 Banana plasma membrane 45.19 58.36
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 59.57 58.18
TraesCS3A01G257500.1 Wheat plasma membrane 58.06 58.15
TraesCS6D01G107600.1 Wheat cytosol, plasma membrane, vacuole 41.86 57.98
TraesCS3D01G257500.1 Wheat plasma membrane 57.82 57.96
TraesCS3B01G136800.1 Wheat golgi, mitochondrion, peroxisome, plasma membrane, plastid 57.59 57.81
TraesCS3B01G290300.2 Wheat peroxisome 57.9 57.54
KXG33192 Sorghum cytosol 56.79 56.34
Bra017539.1-P Field mustard plasma membrane 45.99 56.16
TraesCS2B01G012300.1 Wheat plasma membrane 56.0 56.04
Zm00001d043762_P001 Maize cytosol 56.55 55.93
TraesCS2A01G009900.1 Wheat plasma membrane 55.84 55.88
HORVU2Hr1G001630.2 Barley plasma membrane 55.68 55.86
HORVU2Hr1G001530.10 Barley plasma membrane 55.68 55.86
TraesCS2D01G010500.1 Wheat plasma membrane 55.36 55.41
TraesCS3D01G258100.1 Wheat plasma membrane 54.81 55.2
TraesCS3D01G257900.1 Wheat peroxisome 55.28 55.15
TraesCS3A01G258200.1 Wheat peroxisome 54.65 55.04
TraesCS2D01G010400.1 Wheat plasma membrane 54.57 54.83
HORVU3Hr1G065280.1 Barley plasma membrane 54.81 54.68
Solyc06g009290.2.1 Tomato nucleus 60.76 54.64
HORVU6Hr1G021320.43 Barley peroxisome 54.73 54.47
HORVU3Hr1G065320.47 Barley plasma membrane 55.04 54.44
Zm00001d009447_P002 Maize plasma membrane 54.57 54.35
TraesCS2A01G009600.1 Wheat plasma membrane 54.09 54.35
TraesCS2B01G012100.3 Wheat plasma membrane 54.01 54.27
Os05t0548500-00 Rice plasma membrane 54.25 54.21
KXG35311 Sorghum plasma membrane 53.77 53.94
TraesCS2B01G012200.1 Wheat golgi 46.23 53.94
TraesCS6B01G145600.1 Wheat peroxisome 54.01 53.8
TraesCS3D01G362700.1 Wheat cytosol, peroxisome, plasma membrane 54.65 53.79
Zm00001d009448_P001 Maize cytosol, peroxisome, plasma membrane 53.85 53.64
TraesCS3A01G369700.1 Wheat peroxisome 54.49 53.59
TraesCS3B01G401600.3 Wheat cytosol, peroxisome, plasma membrane 54.33 53.52
Os01t0695700-00 Rice plasma membrane 53.85 53.51
Os02t0323000-01 Rice cytosol, peroxisome 17.95 53.43
KXG32655 Sorghum peroxisome 54.73 53.37
Zm00001d011644_P002 Maize plasma membrane 54.01 52.92
Zm00001d005528_P001 Maize plasma membrane 50.52 52.87
TraesCS3A01G258400.3 Wheat peroxisome 52.74 52.78
Solyc12g098840.1.1 Tomato peroxisome 53.61 52.73
Os01t0533900-01 Rice endoplasmic reticulum, vacuole 34.79 52.46
TraesCS1A01G368500.1 Wheat cytosol, peroxisome, plasma membrane 52.66 52.41
Os01t0534700-00 Rice plasma membrane 45.99 52.35
HORVU3Hr1G065240.14 Barley cytosol 53.22 52.34
TraesCS1B01G387400.1 Wheat peroxisome 52.58 52.33
Zm00001d044564_P008 Maize cytosol, peroxisome, plasma membrane 54.96 52.31
TraesCS3D01G258200.2 Wheat peroxisome 52.26 52.26
TraesCS3B01G291100.3 Wheat peroxisome 52.34 52.14
TraesCS3A01G258000.1 Wheat mitochondrion 54.88 52.11
TraesCS3D01G258300.1 Wheat cytosol, peroxisome, plasma membrane 52.34 52.09
TraesCS1D01G374300.1 Wheat cytosol, peroxisome, plasma membrane 52.5 52.09
TraesCS3B01G291000.1 Wheat peroxisome 52.03 52.07
TraesCS5A01G495900.1 Wheat plasma membrane 52.34 52.01
HORVU1Hr1G078450.24 Barley plasma membrane 51.71 51.46
Solyc11g067300.1.1 Tomato plasma membrane 51.47 51.43
EES01319 Sorghum cytosol 52.03 51.41
TraesCS3B01G290700.1 Wheat peroxisome 42.49 51.05
Zm00001d043766_P005 Maize cytosol 50.99 50.23
Solyc08g076720.2.1 Tomato unclear 43.92 43.99
Solyc05g013890.1.1 Tomato cytosol, plasma membrane 33.04 43.61
Solyc02g087870.2.1 Tomato plasma membrane 42.97 43.31
Solyc03g093650.2.1 Tomato plasma membrane 40.51 41.56
Solyc07g064120.1.1 Tomato plasma membrane 39.79 39.79
Solyc09g008240.2.1 Tomato peroxisome 41.38 39.65
Solyc07g018130.1.1 Tomato plasma membrane 39.87 39.37
Solyc06g072960.1.1 Tomato peroxisome 31.14 38.13
OQU78384 Sorghum plasma membrane 54.49 36.37
Solyc04g010310.2.1 Tomato plasma membrane 36.14 35.41
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640UniProt:K4BE09InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF204
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123EnsemblPlantsGene:Solyc03g005860.2EnsemblPlants:Solyc03g005860.2.1TMHMM:TMhelix
UniParc:UPI000276760FSEG:seg::::
Description
No Description!
Coordinates
chr3:+:581458..589104
Molecular Weight (calculated)
136697.0 Da
IEP (calculated)
7.615
GRAVY (calculated)
0.142
Length
1259 amino acids
Sequence
(BLAST)
0001: MARGGDEKIP FYKLFAFADR NDIILMLFGI LGAIASGVSK PLMSLMFGDL IDSYGTSDQS NILDKVSRIS LKFVYLGIGT GIASLLQVAC WSITGERQVT
0101: RIKCLYLKTI LRQDIEFFDT QSATGEVIER MSGDTILLQE AMGEKVGNFV MHMSTFIGGF VVAFIKEWQL TLVLLATIPA IAISFFCAAL VLSKMSGSGQ
0201: AAYANAGKVV EQTVGGIRTV VSFTGENLSI VDYNSKLENA YKPTVNQALA SGIGLGTILM FSLFSYGLAI WYGAKLIIDK NYSGGDIVTV IFSAMLGGSS
0301: IGQASPSLSA FSAGQAAAYK IYETIKRTPK IDPYDPRGIQ LEDIKGEIEL KDVYFKYPAR PDVQIFSGFS LYIPSGKTAA LVGQSGSGKS TVISLLQRFY
0401: DPEAGEILID GVDIKKFQLK WLRQQMGLVS QEPVLFATTI RENIMYGKEN SSEEEIRNAI KLANAAKFID KLPKGLDTMV GGHGTQISGG QKQRIAIARA
0501: ILKDPRILLL DEATSALDVE SERIIQDALS NIMINRTTVV VAHRLTTIRN ADLIAVVNLG KLVEQGTHDE LIKDIDGAYS QLVQMQQNNK HVENTKGKEI
0601: EDSNAQKRLS CSKNPSGRSQ KFSISSWKSA SKGSSSRYSL AYDLGVTAAI DFHESIRRDD GAESSEYIVD SNRNLSTQKL MSLAYLNKPE VPIMLVGTIA
0701: ASINGAVYPV FGLLLSTSIK IFYESHHELR KDSRFWALMF VVIGVVVMIV APLQNYAFGI AGAKLIQRIR SMTFAKLVYQ EISWFDDPAN SCGAIGARLS
0801: SDASTIRNLA GDALATIVQN ISTVATGMVI ALIANWILAL IMLAILPLLV LQGIIQIKLL QESNAEAKVA NEEASQVAND AIGSIRTVAS FCAEEKVMEM
0901: YQRKSEAPLK QGAKTGLVGG VGLGFSSFVL FSLYALTFYL GAILVKHDKA KFSEVFKVFF ALSMASIGLI ALGNLPSDLS KSKGAAASIF EILDSKPRID
1001: SSSSEGIMLD VIEGNIELQH ISFKYPTRPD MQIFKDLSLS IPAGKTVALV GESGSGKSTV ISLIERFYDP DQGYIYLDGV ELKKLNLRWL RQQMGLVGQE
1101: PILFNETISS NIAYGRQGEV TEEEIISVAK ASNAHNFISS LPNGYKTTVG ERGVQLSGGQ KQRIAIARAI LKDPKILLLD EATSALDTES ERIVQEALDR
1201: VMVNRTTVVV AHRLTTIKNA DVIAVVKNGV VAEKGTHDVL MNNTQGVYAS LVALQTGAT
Best Arabidopsis Sequence Match ( AT4G18050.1 )
(BLAST)
0001: MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV AFLQVSCWMV
0101: TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI AGAAMSLIMS
0201: KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN GGQVINVIFA
0301: VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG QSGSGKSTVI
0401: SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH GTQMSGGQKQ
0501: RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV RLQEGSKEEA
0601: TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS IAAMVHGTVF
0701: PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA LALIVQNIAT
0801: VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV RLGLLSGAGF
0901: GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN GDIEFRHVSF
1001: RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA YGKTGGATEE
1101: EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR LTTIKNADVI
1201: AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN
Arabidopsis Description
PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.