Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 96.25 | 96.25 |
| TraesCS2D01G010400.1 | Wheat | plasma membrane | 94.73 | 94.73 |
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 81.88 | 81.56 |
| TraesCS3A01G257500.1 | Wheat | plasma membrane | 81.32 | 81.07 |
| Zm00001d043762_P001 | Maize | cytosol | 77.02 | 75.81 |
| KXG33192 | Sorghum | cytosol | 76.7 | 75.73 |
| TraesCS3A01G258200.1 | Wheat | peroxisome | 66.56 | 66.72 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 68.32 | 64.56 |
| TraesCS1A01G368500.1 | Wheat | cytosol, peroxisome, plasma membrane | 65.04 | 64.43 |
| TraesCS3A01G258400.3 | Wheat | peroxisome | 64.41 | 64.15 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 59.54 | 60.6 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 60.81 | 59.53 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.58 | 58.86 |
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 54.43 | 58.69 |
| KRH21125 | Soybean | plasma membrane | 58.9 | 58.52 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.5 | 58.04 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 44.93 | 57.74 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.1 | 57.69 |
| KRH11119 | Soybean | plasma membrane | 57.38 | 57.66 |
| AT4G18050.2 | Thale cress | plasma membrane | 57.14 | 57.46 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 56.74 | 57.38 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.96 | 57.38 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 57.14 | 56.69 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 57.3 | 56.67 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.14 | 56.6 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.58 | 56.51 |
| TraesCS1A01G081300.1 | Wheat | unclear | 56.5 | 55.49 |
| AT5G46540.1 | Thale cress | golgi | 54.83 | 55.05 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.91 | 54.65 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 54.35 | 54.09 |
| Bra017539.1-P | Field mustard | plasma membrane | 43.18 | 52.47 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.14 | 41.81 |
| TraesCS2A01G521400.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.22 | 41.79 |
| TraesCS6A01G264900.3 | Wheat | golgi | 41.74 | 41.31 |
| TraesCS4A01G370600.1 | Wheat | plasma membrane | 39.66 | 40.34 |
| TraesCS7A01G284900.1 | Wheat | plasma membrane | 39.66 | 39.89 |
| TraesCS2A01G323900.1 | Wheat | plasma membrane | 37.03 | 36.65 |
| TraesCS7A01G303200.1 | Wheat | cytosol | 22.59 | 36.19 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 35.44 | 35.13 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 37.83 | 33.83 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 37.43 | 33.29 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 37.51 | 31.44 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2A01G009600 | EnsemblPlants:TraesCS2A01G009600.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr2A:-:3834321..3844562
Molecular Weight (calculated)
135675.0 Da
IEP (calculated)
6.746
GRAVY (calculated)
0.147
Length
1253 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAAAVAAEG EESAGRHEKV SFMGLFRHAD GKDQLLMLVG TVAALANGMT TPLMTVFFGD VLDAFGHATD ANVLQRVNKV VLNFVYLGIG AAVISFLQVS
0101: CWTITGERQA ALIRSQYLKS VLRQDISFFD TEMTTGQVVS KMSGDTVLVQ DAIGEKVGKF QKLVAAFLGG FIVGFVKGWI LSLVMLACVP PVVFAAGVVE
0201: KVLSKISSRG QASYSNAGNI VEQTIGSIKI VVSFNGEKKA IISYNKQIHK AYKTDVQEGL TNGFGMAYVL FVFYSSYGLA IWYGGKLVLA KGYTGGQVIT
0301: VLLAIMTGAM SLGNAAPCMT AFIEGQSAAH RLFTTIKRKP EIDPNNNSDK QLVDMRGDIE LKDVYFSYPT RRGQLIFDGF SLHVPSGTTM AIVGESGSGK
0401: STVISLVERF YDPQAGEVSI DGVNIKDLQL DSIRRKISLV GQEPCLFMTS IKDNITYGKE DATIEEIKRA AKLANAANFI DKLPNGYDTM VGQRGAQLSG
0501: GQKQRIAIAR AIIKNPKILL LDEATSALDV ESERIVQEAL DRIMLDRTTL VVAHRLTTVR NVDCISVIQQ GKIVEQGSHD ELILNLDGAY SQLILLQESH
0601: VEQKIDHRLS TPRSSTSLSL KRSISASLGN DTELSFTLPL GLPSTIDLLG EYDTHGKNQK EKNDGGEAGK KDPMVRLAIL NKPEVPILIL GSLAAAVHGV
0701: VFPMFGLVIS SAIKSLYEPP DKLRSDTSFW GMMCFVMGII SVITIPAEFL LFGIAGGKLI ERIRALSFQS IVHQEVAWFD DPRNSSGALG ARLSIDALNV
0801: RRLVGDNLSL IIQLSSTLVT GVVIAMIADW KLALITMCVI PLVGLESYAH VKFLNGFSQD AKMMYEDASQ VATDAVSSIR TIASFCSEKR ITRIYDHKCE
0901: ASVNQGVKTG IVGGIGFGFS YLTLYLTYGL CFYVGGQFVQ QGKSNFGEVF KVFFALVLAT MGVSETSAMA SDSKKAKDSA ISIFTLLDRI SKIDSSSNQG
1001: LTLDEVKGNI DFQHVSFKYP TRLDIQIFHD FTLHIPSGKI VALVGESGSG KSTVITLLER FYNPDSGTIQ LDGVEIKSLN INWFRDQIGL VSQEPVLSND
1101: TIRANIAYGK DGDVTEEELI AAAKISNAHE FISSLPQGYG TSIGERGTQL SGGQKQRVAI ARAILKDPKI LLLDEATSAL DAESERIVQN ALDHVMVGRT
1201: TIVVAHRLST IKGVDIIAVL KDGAIVEKGS HESLVNIKDG LYASLVEFRS ASP
0101: CWTITGERQA ALIRSQYLKS VLRQDISFFD TEMTTGQVVS KMSGDTVLVQ DAIGEKVGKF QKLVAAFLGG FIVGFVKGWI LSLVMLACVP PVVFAAGVVE
0201: KVLSKISSRG QASYSNAGNI VEQTIGSIKI VVSFNGEKKA IISYNKQIHK AYKTDVQEGL TNGFGMAYVL FVFYSSYGLA IWYGGKLVLA KGYTGGQVIT
0301: VLLAIMTGAM SLGNAAPCMT AFIEGQSAAH RLFTTIKRKP EIDPNNNSDK QLVDMRGDIE LKDVYFSYPT RRGQLIFDGF SLHVPSGTTM AIVGESGSGK
0401: STVISLVERF YDPQAGEVSI DGVNIKDLQL DSIRRKISLV GQEPCLFMTS IKDNITYGKE DATIEEIKRA AKLANAANFI DKLPNGYDTM VGQRGAQLSG
0501: GQKQRIAIAR AIIKNPKILL LDEATSALDV ESERIVQEAL DRIMLDRTTL VVAHRLTTVR NVDCISVIQQ GKIVEQGSHD ELILNLDGAY SQLILLQESH
0601: VEQKIDHRLS TPRSSTSLSL KRSISASLGN DTELSFTLPL GLPSTIDLLG EYDTHGKNQK EKNDGGEAGK KDPMVRLAIL NKPEVPILIL GSLAAAVHGV
0701: VFPMFGLVIS SAIKSLYEPP DKLRSDTSFW GMMCFVMGII SVITIPAEFL LFGIAGGKLI ERIRALSFQS IVHQEVAWFD DPRNSSGALG ARLSIDALNV
0801: RRLVGDNLSL IIQLSSTLVT GVVIAMIADW KLALITMCVI PLVGLESYAH VKFLNGFSQD AKMMYEDASQ VATDAVSSIR TIASFCSEKR ITRIYDHKCE
0901: ASVNQGVKTG IVGGIGFGFS YLTLYLTYGL CFYVGGQFVQ QGKSNFGEVF KVFFALVLAT MGVSETSAMA SDSKKAKDSA ISIFTLLDRI SKIDSSSNQG
1001: LTLDEVKGNI DFQHVSFKYP TRLDIQIFHD FTLHIPSGKI VALVGESGSG KSTVITLLER FYNPDSGTIQ LDGVEIKSLN INWFRDQIGL VSQEPVLSND
1101: TIRANIAYGK DGDVTEEELI AAAKISNAHE FISSLPQGYG TSIGERGTQL SGGQKQRVAI ARAILKDPKI LLLDEATSAL DAESERIVQN ALDHVMVGRT
1201: TIVVAHRLST IKGVDIIAVL KDGAIVEKGS HESLVNIKDG LYASLVEFRS ASP
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.