Factsheet for TraesCS7A01G284900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G134500.3
TraesCS5B01G131200.1
TraesCS5D01G139000.1
TraesCS7A01G492400.1
TraesCS7B01G398100.1
TraesCS7D01G478800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36910.1	TraesCS5A01G134500.3	AT3G21640.1	14517332
AT2G36910.1	TraesCS5B01G131200.1	AT3G21640.1	14517332
AT2G36910.1	TraesCS5D01G139000.1	AT3G21640.1	14517332
AT2G36910.1	TraesCS7A01G492400.1	AT5G57090.1	17237354
AT2G36910.1	TraesCS7B01G398100.1	AT5G57090.1	17237354
AT2G36910.1	TraesCS7D01G478800.1	AT5G57090.1	17237354

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G284100.1	Wheat	cytosol	99.04	89.75
TraesCS7B01G181700.1	Wheat	cytosol	98.39	89.62
HORVU7Hr1G063020.3	Barley	cytosol	97.67	86.25
Os08t0564300-04	Rice	plasma membrane	85.39	79.17
Zm00001d031871_P001	Maize	cytosol	88.36	77.75
AT2G36910.1	Thale cress	peroxisome	78.89	76.44
Solyc09g008240.2.1	Tomato	peroxisome	78.33	74.28
GSMUA_Achr4P12130_001	Banana	cytosol	79.69	73.72
KRH32507	Soybean	cytosol, nucleus, plasma membrane	79.45	73.72
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	79.21	73.71
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	79.21	73.55
CDY46744	Canola	cytosol, peroxisome, plasma membrane	78.89	73.47
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	78.89	73.41
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	78.81	73.23
PGSC0003DMT400009924	Potato	peroxisome	78.33	73.22
CDX79704	Canola	plasma membrane	78.73	73.15
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	78.33	72.94
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	79.21	72.9
GSMUA_Achr4P04430_001	Banana	cytosol, peroxisome, plasma membrane	78.33	72.03
OQU80682	Sorghum	plasma membrane	88.76	71.77
TraesCS2A01G344300.1	Wheat	cytosol, peroxisome, plasma membrane	52.01	51.31
TraesCS2A01G521400.2	Wheat	cytosol, peroxisome, plasma membrane	51.2	50.39
TraesCS6A01G264900.3	Wheat	golgi	48.23	47.47
TraesCS4A01G370600.1	Wheat	plasma membrane	42.78	43.26
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	40.21	43.12
TraesCS1A01G081300.1	Wheat	unclear	42.62	41.61
TraesCS3A01G257500.1	Wheat	plasma membrane	41.33	40.97
TraesCS7A01G303200.1	Wheat	cytosol	25.52	40.66
TraesCS2A01G009900.1	Wheat	plasma membrane	40.85	40.46
TraesCS3A01G369700.1	Wheat	peroxisome	41.49	40.39
TraesCS3A01G258400.3	Wheat	peroxisome	40.37	39.98
TraesCS3A01G258200.1	Wheat	peroxisome	40.05	39.92
TraesCS2A01G009600.1	Wheat	plasma membrane	39.89	39.66
TraesCS2A01G323900.1	Wheat	plasma membrane	40.13	39.49
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	39.17	38.58
TraesCS5A01G495900.1	Wheat	plasma membrane	39.17	38.52
TraesCS3A01G258000.1	Wheat	mitochondrion	39.89	37.48
TraesCS3A01G536300.1	Wheat	cytosol, plasma membrane, vacuole	42.05	37.4
TraesCS7A01G303100.1	Wheat	peroxisome	37.64	37.1
TraesCS4A01G101600.3	Wheat	cytosol, plasma membrane, plastid	41.33	36.55
TraesCS4A01G006900.1	Wheat	peroxisome	41.41	34.52

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008361
GO:GO:0009506	GO:GO:0009605	GO:GO:0009606	GO:GO:0009607	GO:GO:0009624	GO:GO:0009628
GO:GO:0009637	GO:GO:0009639	GO:GO:0009640	GO:GO:0009719	GO:GO:0009733	GO:GO:0009791
GO:GO:0009908	GO:GO:0009926	GO:GO:0009958	GO:GO:0009987	GO:GO:0010315	GO:GO:0010328
GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0043481	GO:GO:0048443	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF119	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G284900	EnsemblPlants:TraesCS7A01G284900.1	TIGR:cd03249	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:325709473..325715354

Molecular Weight (calculated)

134856.0 Da

IEP (calculated)

9.018

GRAVY (calculated)

0.138

Length

1246 amino acids

Sequence
(BLAST)

0001: MAVGTLGALV HGCSLPVFLR FFADLVDSFG SHADDPDTMV RLVVKYAFYF LVVGAAIWAS SWAEISCWMW TGERQSTRMR IRYLQAALKQ DVSFFDTDVR
0101: TSDVIYAINA DAVMVQDAIS EKLGNLIHYM ATFVAGFVVG FTAAWQLALV TLAVVPLIAV IGGLTAATMG KLSSKSQDAL SSASNIAEQA LSQIRVVQSF
0201: VGEERVAQAY SAALAVAQSI GYRNGFAKGL GLGGTYFTVF CCYALLLWYG GHLVRGHHTN GGLAIATMFS VMIGGLGLGQ SAPSMAAFAK ARVAAAKIFR
0301: IIDHTPGITK EGVELESVTG RLELRNVEFA YPSRPDTPIL RRFSLSVPAG KTIALVGSSG SGKSTVVSLI ERFYDPSSAG QIMLDGVELK DLKLRWLRSQ
0401: IGLVSQEPAL FATSIRENLL LGREEASQVE MEEAARVANA HSFIIKLPDG YDTQVGERGL QLSGGQKQRI AIARAMLKNP AILLLDEATS ALDSESEKLV
0501: QEALDRFMIG RTTLVIAHRL STIRKADLVA VLQAGAVSEM GAHDDLMARG DSGAYAKLIR MQEQAHEAAI VSARRSSARP SSARNSVSSP IMMRNSSYGR
0601: SPYSRRLSDF STADFSLSVI HDPAAHRMGM GMGMEKLAFR AQASSFWRLA KMNSPEWGYA LAGSVGSMVC GSFSAIFAYI LSAVLSIYYT PDPRHMDREI
0701: AKYCYLLIGM SSAALLFNTV QHLFWDTVGE NLTKRVREKM LTAVLRNEMA WFDMEANASA HIAARLALDA QNVRSAIGDR ISIIVQNSAL MLVACTAGFV
0801: LQWRLALVLL AVFPLVVGAT VLQKMFMKGF SGDLEGAHAK ATQIAGEAVA NVRTVAAFNS EDKITRLFEA NLQRPLRRCF WKGQIAGIGY GVAQFLLYAS
0901: YALGLWYAAW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG RAMQSVFETI DRKTEIEPDD VDAAAVPERP RGDVELKHVD FSYPSRPDVQ
1001: VFRDLSLRAR AGRTLALVGP SGCGKSSVLA LIQRFYEASS GRVLLDGKDI RKYNLKALRR VVAMVPQEPF LFAGTIHDNI AYGREGATEA EVVEAATQAN
1101: AHKFVSALPE GYKTCVGERG VQLSGGQRQR IAIARALVKQ AAIMLLDEAT SALDAESERC VQEALDRAGP GSGRTTIVVA HRLATVRNAH TIAVIDDGKV
1201: VEQGSHSHLL NHHPDGCYAR MLQLQRLTPH TLAVPGPGPG SSASNV

Best Arabidopsis Sequence Match ( AT2G36910.1 )
(BLAST)

0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA

Arabidopsis Description

ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.