Factsheet for AT2G36910.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	96.35	92.53
CDY46744	Canola	cytosol, peroxisome, plasma membrane	96.11	92.38
CDX79704	Canola	plasma membrane	95.96	92.02
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	94.79	91.11
KRG96023	Soybean	cytosol, peroxisome, plasma membrane	88.65	85.14
KRH67730	Soybean	cytosol, peroxisome, plasma membrane	88.41	84.72
KRH32507	Soybean	cytosol, nucleus, plasma membrane	87.4	83.69
Solyc09g008240.2.1	Tomato	peroxisome	85.07	83.26
KRH19897	Soybean	cytosol, peroxisome, plasma membrane	86.47	82.92
VIT_08s0007g05060.t01	Wine grape	cytosol, peroxisome, plasma membrane	86.63	82.27
PGSC0003DMT400009924	Potato	peroxisome	85.23	82.22
TraesCS7A01G284900.1	Wheat	plasma membrane	76.44	78.89
GSMUA_Achr4P12130_001	Banana	cytosol	76.75	73.27
TraesCS7B01G181700.1	Wheat	cytosol	77.22	72.59
TraesCS7D01G284100.1	Wheat	cytosol	77.37	72.36
GSMUA_Achr4P04430_001	Banana	cytosol, peroxisome, plasma membrane	75.82	71.96
Os08t0564300-04	Rice	plasma membrane	74.49	71.28
HORVU7Hr1G063020.3	Barley	cytosol	77.37	70.52
Zm00001d031871_P001	Maize	cytosol	76.05	69.07
OQU80682	Sorghum	plasma membrane	75.43	62.95
AT3G28860.1	Thale cress	plasma membrane	51.94	53.35
AT1G10680.1	Thale cress	plasma membrane	46.19	48.41
AT4G25960.1	Thale cress	plasma membrane	47.82	48.31
AT1G27940.1	Thale cress	peroxisome, plasma membrane, vacuole	46.73	48.27
AT3G28345.1	Thale cress	plasma membrane	42.53	44.11
AT4G18050.2	Thale cress	plasma membrane	42.38	43.74
AT3G28390.1	Thale cress	plasma membrane	40.98	43.02
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	40.98	42.85
AT5G46540.1	Thale cress	golgi	41.37	42.63
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	40.67	42.55
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	42.22	42.49
AT3G28360.1	Thale cress	plasma membrane	40.44	42.35
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	42.53	42.21
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	41.84	41.84
AT2G39480.1	Thale cress	cytosol, mitochondrion, plasma membrane	40.98	37.46
AT3G55320.1	Thale cress	cytosol, peroxisome, plasma membrane	40.98	37.43

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	EntrezGene:818265	InterPro:AAA+_ATPase	ProteinID:AAD31576.1	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEC09320.1	ArrayExpress:AT2G36910	EnsemblPlantsGene:AT2G36910
RefSeq:AT2G36910	TAIR:AT2G36910	RefSeq:AT2G36910-TAIR-G	EnsemblPlants:AT2G36910.1	TAIR:AT2G36910.1	Symbol:ATPGP1
EMBL:AY140105	Unigene:At.142	ProteinID:CAA43646.1	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008361	GO:GO:0009506	GO:GO:0009605	GO:GO:0009606	GO:GO:0009607
GO:GO:0009624	GO:GO:0009628	GO:GO:0009637	GO:GO:0009639	GO:GO:0009640	GO:GO:0009719
GO:GO:0009733	GO:GO:0009734	GO:GO:0009791	GO:GO:0009908	GO:GO:0009926	GO:GO:0009958
GO:GO:0009987	GO:GO:0010315	GO:GO:0010328	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0043481	GO:GO:0048443
GO:GO:0055085	GO:GO:0060919	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	RefSeq:NP_181228.1
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	PO:PO:0000005	PO:PO:0000013	PO:PO:0000027
PO:PO:0000037	PO:PO:0000230	PO:PO:0000256	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF384
UniProt:Q9ZR72	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI00000A02EA
SEG:seg	:	:	:	:	:

Description

ABCB1ABC transporter B family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR72]

Coordinates

chr2:+:15501726..15507501

Molecular Weight (calculated)

140581.0 Da

IEP (calculated)

8.374

GRAVY (calculated)

0.070

Length

1286 amino acids

Sequence
(BLAST)

0001: MDNDGGAPPP PPTLVVEEPK KAEIRGVAFK ELFRFADGLD YVLMGIGSVG AFVHGCSLPL FLRFFADLVN SFGSNSNNVE KMMEEVLKYA LYFLVVGAAI
0101: WASSWAEISC WMWSGERQTT KMRIKYLEAA LNQDIQFFDT EVRTSDVVFA INTDAVMVQD AISEKLGNFI HYMATFVSGF IVGFTAVWQL ALVTLAVVPL
0201: IAVIGGIHTT TLSKLSNKSQ ESLSQAGNIV EQTVVQIRVV MAFVGESRAS QAYSSALKIA QKLGYKTGLA KGMGLGATYF VVFCCYALLL WYGGYLVRHH
0301: LTNGGLAIAT MFAVMIGGLA LGQSAPSMAA FAKAKVAAAK IFRIIDHKPT IERNSESGVE LDSVTGLVEL KNVDFSYPSR PDVKILNNFC LSVPAGKTIA
0401: LVGSSGSGKS TVVSLIERFY DPNSGQVLLD GQDLKTLKLR WLRQQIGLVS QEPALFATSI KENILLGRPD ADQVEIEEAA RVANAHSFII KLPDGFDTQV
0501: GERGLQLSGG QKQRIAIARA MLKNPAILLL DEATSALDSE SEKLVQEALD RFMIGRTTLI IAHRLSTIRK ADLVAVLQQG SVSEIGTHDE LFSKGENGVY
0601: AKLIKMQEAA HETAMSNARK SSARPSSARN SVSSPIMTRN SSYGRSPYSR RLSDFSTSDF SLSIDASSYP NYRNEKLAFK DQANSFWRLA KMNSPEWKYA
0701: LLGSVGSVIC GSLSAFFAYV LSAVLSVYYN PDHEYMIKQI DKYCYLLIGL SSAALVFNTL QHSFWDIVGE NLTKRVREKM LSAVLKNEMA WFDQEENESA
0801: RIAARLALDA NNVRSAIGDR ISVIVQNTAL MLVACTAGFV LQWRLALVLV AVFPVVVAAT VLQKMFMTGF SGDLEAAHAK GTQLAGEAIA NVRTVAAFNS
0901: EAKIVRLYTA NLEPPLKRCF WKGQIAGSGY GVAQFCLYAS YALGLWYASW LVKHGISDFS KTIRVFMVLM VSANGAAETL TLAPDFIKGG QAMRSVFELL
1001: DRKTEIEPDD PDTTPVPDRL RGEVELKHID FSYPSRPDIQ IFRDLSLRAR AGKTLALVGP SGCGKSSVIS LIQRFYEPSS GRVMIDGKDI RKYNLKAIRK
1101: HIAIVPQEPC LFGTTIYENI AYGHECATEA EIIQAATLAS AHKFISALPE GYKTYVGERG VQLSGGQKQR IAIARALVRK AEIMLLDEAT SALDAESERS
1201: VQEALDQACS GRTSIVVAHR LSTIRNAHVI AVIDDGKVAE QGSHSHLLKN HPDGIYARMI QLQRFTHTQV IGMTSGSSSR VKEDDA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.