Factsheet for AT3G62150.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67881	Canola	cytosol	89.35	96.42
CDY25095	Canola	cytosol	89.2	95.85
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	94.91	95.2
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	83.02	83.67
Os05t0137200-01	Rice	plasma membrane	22.99	75.83
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.69	74.63
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	73.15	73.95
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	73.15	73.95
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	63.04	73.87
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	72.61	73.12
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	72.07	73.08
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	70.52	71.24
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	67.44	71.11
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	67.44	71.06
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	70.29	70.67
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	65.35	69.88
GSMUA_Achr1P25070_001	Banana	plasma membrane	48.69	69.65
OQU77362	Sorghum	mitochondrion, plasma membrane	61.03	68.54
KXG32330	Sorghum	plastid	67.13	67.97
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	66.67	67.61
Solyc06g009290.2.1	Tomato	nucleus	72.45	67.07
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	64.74	65.75
TraesCS1A01G081300.1	Wheat	unclear	64.66	65.67
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	64.58	65.65
HORVU1Hr1G017460.3	Barley	plasma membrane	64.27	64.93
AT4G18050.2	Thale cress	plasma membrane	62.19	64.69
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	66.59	64.64
GSMUA_Achr9P16700_001	Banana	plasma membrane	59.72	60.94
AT5G46540.1	Thale cress	golgi	57.18	59.38
AT3G28860.1	Thale cress	plasma membrane	43.75	45.29
AT1G10680.1	Thale cress	plasma membrane	41.98	44.34
AT4G25960.1	Thale cress	plasma membrane	42.98	43.75
AT1G27940.1	Thale cress	peroxisome, plasma membrane, vacuole	41.28	42.97
AT2G36910.1	Thale cress	peroxisome	42.21	42.53
AT3G28345.1	Thale cress	plasma membrane	40.35	42.18
AT3G28390.1	Thale cress	plasma membrane	38.66	40.9
AT3G28360.1	Thale cress	plasma membrane	38.66	40.8
AT3G55320.1	Thale cress	cytosol, peroxisome, plasma membrane	37.65	34.66
AT2G39480.1	Thale cress	cytosol, mitochondrion, plasma membrane	37.27	34.33

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	EntrezGene:825388	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE80316.1	ProteinID:ANM65205.1	ProteinID:ANM65206.1
ArrayExpress:AT3G62150	EnsemblPlantsGene:AT3G62150	RefSeq:AT3G62150	TAIR:AT3G62150	RefSeq:AT3G62150-TAIR-G	EnsemblPlants:AT3G62150.2
Unigene:At.34174	ProteinID:CAB71875.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009987	GO:GO:0010315	GO:GO:0010328
GO:GO:0010329	GO:GO:0010540	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	GO:GO:0060919	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640
RefSeq:NP_001327192.1	RefSeq:NP_001327193.1	RefSeq:NP_191774.2	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
Symbol:PGP21	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292
UniProt:Q9M1Q9	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0001E92D47
SEG:seg	:	:	:	:	:

Description

ABCB21ABC transporter B family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Q9]

Coordinates

chr3:-:23008653..23013909

Molecular Weight (calculated)

140343.0 Da

IEP (calculated)

6.811

GRAVY (calculated)

0.089

Length

1296 amino acids

Sequence
(BLAST)

0001: MDSVIESEEG LKVDSPNRAD AETSNSKIHE EDEKELKTES DLKEEKKKTE KNKQEEDEKT KTVPFHKLFA FADSFDIILM ILGTIGAVGN GLGFPIMTIL
0101: FGDVIDVFGQ NQNSSDVSDK IAKVALKFVY LGLGTLVAAL LQVSGWMISG ERQAGRIRSL YLQTILRQDI AFFDVETNTG EVVGRMSGDT VLIQDAMGEK
0201: VGKAIQLVST FIGGFVIAFT EGWLLTLVMV SSIPLLVMSG AALAIVISKM ASRGQTSYAK AAVVVEQTVG SIRTVASFTG EKQAISNYNK HLVSAYRAGV
0301: FEGASTGLGL GTLNIVIFCT YALAVWYGGK MILEKGYTGG QVLIIIFAVL TGSMSLGQAS PCLSAFAAGQ AAAYKMFEAI KRKPEIDASD TTGKVLDDIR
0401: GDIELNNVNF SYPARPEEQI FRGFSLSISS GSTVALVGQS GSGKSTVVSL IERFYDPQSG EVRIDGINLK EFQLKWIRSK IGLVSQEPVL FTSSIKENIA
0501: YGKENATVEE IRKATELANA SKFIDKLPQG LDTMVGEHGT QLSGGQKQRI AVARAILKDP RILLLDEATS ALDAESERIV QEALDRIMVN RTTVVVAHRL
0601: STVRNADMIA VIHQGKIVEK GSHSELLRDP EGAYSQLIRL QEDTKQTEDS TDEQKLSMES MKRSSLRKSS LSRSLSKRSS SFSMFGFPAG IDTNNEAIPE
0701: KDIKVSTPIK EKKVSFFRVA ALNKPEIPML ILGSIAAVLN GVILPIFGIL ISSVIKAFFK PPEQLKSDTR FWAIIFMLLG VASMVVFPAQ TIFFSIAGCK
0801: LVQRIRSMCF EKVVRMEVGW FDETENSSGA IGARLSADAA TVRGLVGDAL AQTVQNLASV TAGLVIAFVA SWQLAFIVLA MLPLIGLNGY IYMKFMVGFS
0901: ADAKRMYEEA SQVANDAVGS IRTVASFCAE EKVMKMYKKK CEGPMRTGIR QGIVSGIGFG VSFFVLFSSY AASFYAGARL VDDGKTTFDS VFRVFFALTM
1001: AAVAISQSSS LSPDSSKASN AAASIFAVID RESKIDPSDE SGRVLDNVKG DIELRHISFK YPSRPDVQIF QDLCLSIRAG KTIALVGESG SGKSTVIALL
1101: QRFYDPDSGQ ITLDGVEIKT LQLKWLRQQT GLVSQEPVLF NETIRANIAY GKGGDATETE IVSAAELSNA HGFISGLQQG YDTMVGERGV QLSGGQKQRV
1201: AIARAIVKDP KVLLLDEATS ALDAESERVV QDALDRVMVN RTTVVVAHRL STIKNADVIA VVKNGVIVEK GKHETLINIK DGVYASLVQL HLSAST

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.