Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89963 Canola cytosol, nucleus, plasma membrane 91.86 92.88
CDY15249 Canola cytosol, peroxisome, plasma membrane 91.86 92.44
Bra033331.1-P Field mustard cytosol, nucleus, plasma membrane 91.39 92.26
CDY15432 Canola cytosol 88.34 92.24
CDY51307 Canola cytosol, peroxisome, plasma membrane 91.16 92.17
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 92.02 92.16
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 78.25 81.37
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 78.25 81.3
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 64.71 74.77
Os05t0137200-01 Rice plasma membrane 22.93 74.55
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 74.1 73.64
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 74.73 73.63
KRH33644 Soybean cytosol, peroxisome, plasma membrane 73.63 73.4
KRH69152 Soybean cytosol, peroxisome, plasma membrane 73.63 73.4
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 73.47 72.96
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 73.08 72.07
KRH68334 Soybean cytosol, peroxisome, plasma membrane 71.83 71.55
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 70.66 70.05
GSMUA_Achr1P25070_001 Banana plasma membrane 49.22 69.43
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 65.73 69.31
KXG32330 Sorghum plastid 67.29 67.19
OQU77362 Sorghum mitochondrion, plasma membrane 60.56 67.07
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 67.06 67.06
Solyc06g009290.2.1 Tomato nucleus 72.85 66.5
AT4G18050.2 Thale cress plasma membrane 63.69 65.33
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 67.14 64.27
TraesCS1A01G081300.1 Wheat unclear 63.93 64.03
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 63.93 64.03
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 63.85 64.0
HORVU1Hr1G017460.3 Barley plasma membrane 63.69 63.45
GSMUA_Achr9P16700_001 Banana plasma membrane 60.95 61.34
AT5G46540.1 Thale cress golgi 59.7 61.14
AT3G28860.1 Thale cress plasma membrane 44.29 45.21
AT1G10680.1 Thale cress plasma membrane 42.96 44.74
AT4G25960.1 Thale cress plasma membrane 43.98 44.15
AT2G36910.1 Thale cress peroxisome 42.49 42.22
AT1G27940.1 Thale cress peroxisome, plasma membrane, vacuole 41.08 42.17
AT3G28345.1 Thale cress plasma membrane 40.69 41.94
AT3G28390.1 Thale cress plasma membrane 39.12 40.82
AT3G28360.1 Thale cress plasma membrane 38.5 40.07
AT3G55320.1 Thale cress cytosol, peroxisome, plasma membrane 37.87 34.38
AT2G39480.1 Thale cress cytosol, mitochondrion, plasma membrane 37.25 33.83
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300EntrezGene:839353UniProt:A0A178WK73InterPro:AAA+_ATPase
ProteinID:AAG10628.1InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEE27440.1
ProteinID:ANM60098.1ProteinID:ANM60099.1ArrayExpress:AT1G02520EnsemblPlantsGene:AT1G02520RefSeq:AT1G02520TAIR:AT1G02520
RefSeq:AT1G02520-TAIR-GEnsemblPlants:AT1G02520.1TAIR:AT1G02520.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506GO:GO:0009719
GO:GO:0009987GO:GO:0010315GO:GO:0010329GO:GO:0010540GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085InterPro:IPR003439InterPro:IPR011527
InterPro:IPR036640RefSeq:NP_001322407.1RefSeq:NP_001322408.1RefSeq:NP_171753.1ProteinID:OAP18727.1InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF00664Symbol:PGP11PO:PO:0000293PO:PO:0005020PO:PO:0005052
PO:PO:0005417PO:PO:0005421PO:PO:0005679PO:PO:0005708PO:PO:0009053ScanProsite:PS00211
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF292UniProt:Q9FWX7SMART:SM00382
SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI00000A6185SEG:seg:
Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
Coordinates
chr1:+:523536..529069
Molecular Weight (calculated)
137675.0 Da
IEP (calculated)
7.800
GRAVY (calculated)
0.147
Length
1278 amino acids
Sequence
(BLAST)
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.