Factsheet for AT1G10680.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37953	Canola	plasma membrane	88.83	88.98
CDX93393	Canola	plasma membrane	88.67	88.82
Bra019907.1-P	Field mustard	plasma membrane	88.67	88.82
AT4G25960.1	Thale cress	plasma membrane	82.48	79.5
VIT_02s0012g01660.t01	Wine grape	plasma membrane	77.67	76.67
KRH74394	Soybean	plasma membrane	75.63	74.48
KRH39563	Soybean	peroxisome	75.47	74.38
Solyc08g076720.2.1	Tomato	unclear	75.47	73.67
PGSC0003DMT400045176	Potato	peroxisome	75.39	73.59
KRH45417	Soybean	plasma membrane	74.41	72.81
EES05688	Sorghum	plasma membrane	73.84	71.9
Zm00001d051514_P002	Maize	mitochondrion	73.43	71.39
TraesCS6A01G264900.3	Wheat	golgi	73.59	71.33
TraesCS6D01G250000.1	Wheat	golgi	73.19	71.21
TraesCS6B01G291900.1	Wheat	peroxisome	73.27	71.18
Os02t0693700-02	Rice	plasma membrane	73.11	70.97
HORVU6Hr1G067170.3	Barley	endoplasmic reticulum, vacuole	52.16	66.95
HORVU6Hr1G067200.1	Barley	plastid	73.27	66.35
AT3G28860.1	Thale cress	plasma membrane	50.29	49.28
AT1G27940.1	Thale cress	peroxisome, plasma membrane, vacuole	49.14	48.43
AT2G36910.1	Thale cress	peroxisome	48.41	46.19
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	44.01	43.9
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	43.68	43.61
AT1G02520.1	Thale cress	cytosol, peroxisome, plasma membrane	44.74	42.96
AT4G18050.2	Thale cress	plasma membrane	43.36	42.7
AT3G62150.2	Thale cress	cytosol, nucleus, plasma membrane	44.34	41.98
AT3G28390.1	Thale cress	plasma membrane	41.89	41.96
AT2G47000.1	Thale cress	cytosol, peroxisome, plasma membrane	43.77	41.76
AT5G46540.1	Thale cress	golgi	42.38	41.67
AT3G28345.1	Thale cress	plasma membrane	41.73	41.29
GSMUA_Achr4P17010_001	Banana	peroxisome	36.76	40.81
AT3G28360.1	Thale cress	plasma membrane	40.59	40.55
AT3G55320.1	Thale cress	cytosol, peroxisome, plasma membrane	41.65	36.29
AT2G39480.1	Thale cress	cytosol, mitochondrion, plasma membrane	41.4	36.11

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	EntrezGene:837611	InterPro:AAA+_ATPase	ProteinID:AAF17668.1	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	ProteinID:AEE28628.1	ArrayExpress:AT1G10680	EnsemblPlantsGene:AT1G10680
RefSeq:AT1G10680	TAIR:AT1G10680	RefSeq:AT1G10680-TAIR-G	EnsemblPlants:AT1G10680.1	TAIR:AT1G10680.1	Unigene:At.51557
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	RefSeq:NP_172538.1	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	Symbol:PGP10	PO:PO:0000084	PO:PO:0001016	PO:PO:0001017
PO:PO:0025281	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF415
UniProt:Q9SGY1	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0000162D0F
SEG:seg	:	:	:	:	:

Description

ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]

Coordinates

chr1:-:3538341..3543925

Molecular Weight (calculated)

134482.0 Da

IEP (calculated)

7.219

GRAVY (calculated)

0.186

Length

1227 amino acids

Sequence
(BLAST)

0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.