Factsheet for Bra019907.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93393	Canola	plasma membrane	98.45	98.45
CDY37953	Canola	plasma membrane	97.55	97.55
AT1G10680.1	Thale cress	plasma membrane	88.82	88.67
Bra013936.1-P	Field mustard	plasma membrane	79.35	78.77
Bra019135.1-P	Field mustard	plasma membrane	77.31	76.31
VIT_02s0012g01660.t01	Wine grape	plasma membrane	75.59	74.5
KRH74394	Soybean	plasma membrane	74.61	73.35
KRH39563	Soybean	peroxisome	74.45	73.25
Solyc08g076720.2.1	Tomato	unclear	74.04	72.16
PGSC0003DMT400045176	Potato	peroxisome	73.88	72.0
KRH45417	Soybean	plasma membrane	72.41	70.73
EES05688	Sorghum	plasma membrane	72.33	70.32
Os02t0693700-02	Rice	plasma membrane	72.08	69.86
Zm00001d051514_P002	Maize	mitochondrion	71.92	69.81
TraesCS6A01G264900.3	Wheat	golgi	72.0	69.67
TraesCS6D01G250000.1	Wheat	golgi	71.67	69.63
TraesCS6B01G291900.1	Wheat	peroxisome	71.51	69.36
HORVU6Hr1G067170.3	Barley	endoplasmic reticulum, vacuole	50.69	64.96
HORVU6Hr1G067200.1	Barley	plastid	71.67	64.8
Bra032855.1-P	Field mustard	cytosol	5.88	61.02
Bra025359.1-P	Field mustard	plasma membrane	50.45	49.36
Bra039042.1-P	Field mustard	plasma membrane	50.45	49.36
Bra032856.1-P	Field mustard	plasma membrane	48.33	47.78
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.24	44.17
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.0	43.91
Bra012621.1-P	Field mustard	plasma membrane	44.16	43.38
Bra003445.1-P	Field mustard	peroxisome	44.08	43.06
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	42.86	42.65
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	44.08	42.32
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.35	41.94
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.0	41.72
Bra004484.1-P	Field mustard	cytosol	43.59	41.59
Bra040475.1-P	Field mustard	cytosol	43.43	41.34
Bra025326.1-P	Field mustard	plasma membrane	41.71	41.08
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	35.27	40.41
GSMUA_Achr4P17010_001	Banana	peroxisome	36.24	40.18
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	40.08	39.56
Bra025331.1-P	Field mustard	plasma membrane	36.41	39.16
Bra017539.1-P	Field mustard	plasma membrane	32.0	38.02
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	41.22	35.99
Bra005036.1-P	Field mustard	mitochondrion	41.31	35.94
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	40.9	35.79

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra019907	EnsemblPlants:Bra019907.1	EnsemblPlants:Bra019907.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4DTR4	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF415
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000253EA93	SEG:seg

Description

AT1G10680 (E=0.0) PGP10 | PGP10 (P-GLYCOPROTEIN 10); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA06:-:3774011..3781100

Molecular Weight (calculated)

134184.0 Da

IEP (calculated)

7.174

GRAVY (calculated)

0.167

Length

1225 amino acids

Sequence
(BLAST)

0001: MQPSDVSATV AEKKEKEKKR PSVSVFKLFS FADFYDCVLM TLGSIGACIH GASVPVFFIF FGKLINIIGL AYLFPQEASH KVAKYSLDFV YLSVAILFSS
0101: WLEVACWMHT GERQAAKIRK AYLRSMLSQD ISLFDTESST GEVISAITSD ILVVQDALSE KVGNFLHCMS RFIAGFAIGF ASVWQISLVT LSIVPLIAVA
0201: GGIYAYVSTG LLASVRKSYV KAGEIAEEVI GNVRTVQAFT GEEKAVRSYG EALENTYTYG RKAGLAKGLG LGSMHCVLFL SWALLVWFAS IIVHKGIANG
0301: GESFTTMLNV VIAGLSLGQA APDISTFVRA RAAAYPIFQM IERNKEVKTG RKLGKVDGEI CFRDVTFTYP SRPDVVVFDK LNLVIPAGKV VALVGGSGSG
0401: KSTVISLIER FYEPTDGAVF LDGNDVRYLD LKWLRGHIGL VNQEPAFFAT TIRENIMYGK DDATDEEITR AVTLSEAVSF INKLPDGFET QVGERGVQLS
0501: GGQKQTITIS RAILKNPSIL LLDEATSALD AESEKTVQKA LDKVMVGRTT VVVAHRLSTV RNADIIAVVH GGNIIESGSH DELISNPDGA YSSLLRIQEA
0601: ANPNVNHTPS LPVSTEPLPE RPITKTDLCS MDQSGNQPDT TRQGKVTLGR LYSMIRPDWK YGLFGLFGSL VAGSQMPLFA LGISQALVSY YMDWETTQKE
0701: VKRISILFCC ASVITVISHA IEHTTFGIMG ERLTLRVRQM MFSAILRNEI GWFDKVDNTS SMLASQLESD STLLRTIVVD RSTILLENFG LVVTSFIISF
0801: ILNWRLTLVV LARYPLIISG HISEKIFMQG YGVNLNKAYL KANMLAGEAI SNIRTVAAFC AEVKVLELYS NELREPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS VLMGQGLSSF ESVMKTFMVL IVTALVMGEV LALAPDILKG NKMVASVFEL LDRRSQVVGD KGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: GDFDLTVPYG KSMALVGQSG SGKSSVLSLI LRFYDPTAGI IMIDGQDIRK LKLKSLRRHV GLVQQEPALF ATTIYENILY GKEGALESEV MEAAKLANAH
1101: DFICSLPGGY STQVGERGIQ MSGGQRQRIA IARAVLKNPA ILLLDEATSA LDVESERVVQ QALDRLMRNR TTVVVAHRLS TIKNSDMISV IQEGKIIEQG
1201: SHNSLIENEN GPYSRLINLQ QHQLS

Best Arabidopsis Sequence Match ( AT1G10680.1 )
(BLAST)

0001: MQPSNDPAIV DMAAAEKEKK RPSVSFLKLF SFADFYDCVL MALGSIGACI HGASVPVFFI FFGKLINIIG LAYLFPQEAS HKVAKYSLDF VYLSVVILFS
0101: SWLEVACWMH TGERQAAKIR KAYLRSMLSQ DISLFDTEIS TGEVISAITS EILVVQDAIS EKVGNFMHFI SRFIAGFAIG FASVWQISLV TLSIVPFIAL
0201: AGGIYAFVSS GLIVRVRKSY VKANEIAEEV IGNVRTVQAF TGEEKAVSSY QGALRNTYNY GRKAGLAKGL GLGSLHFVLF LSWALLIWFT SIVVHKGIAN
0301: GGESFTTMLN VVIAGLSLGQ AAPDISTFMR ASAAAYPIFQ MIERNTEDKT GRKLGNVNGD ILFKDVTFTY PSRPDVVIFD KLNFVIPAGK VVALVGGSGS
0401: GKSTMISLIE RFYEPTDGAV MLDGNDIRYL DLKWLRGHIG LVNQEPVLFA TTIRENIMYG KDDATSEEIT NAAKLSEAIS FINNLPEGFE TQVGERGIQL
0501: SGGQKQRISI SRAIVKNPSI LLLDEATSAL DAESEKIVQE ALDRVMVGRT TVVVAHRLST VRNADIIAVV GGGKIIESGS HDELISNPDG AYSSLLRIQE
0601: AASPNLNHTP SLPVSTKPLP ELPITETTSS IHQSVNQPDT TKQAKVTVGR LYSMIRPDWK YGLCGTLGSF IAGSQMPLFA LGIAQALVSY YMDWETTQNE
0701: VKRISILFCC GSVITVIVHT IEHTTFGIMG ERLTLRVRQK MFSAILRNEI GWFDKVDNTS SMLASRLESD ATLLRTIVVD RSTILLENLG LVVTAFIISF
0801: ILNWRLTLVV LATYPLIISG HISEKIFMQG YGGNLSKAYL KANMLAGESI SNIRTVVAFC AEEKVLDLYS KELLEPSERS FRRGQMAGIL YGVSQFFIFS
0901: SYGLALWYGS ILMEKGLSSF ESVMKTFMVL IVTALVMGEV LALAPDLLKG NQMVVSVFEL LDRRTQVVGD TGEELSNVEG TIELKGVHFS YPSRPDVTIF
1001: SDFNLLVPSG KSMALVGQSG SGKSSVLSLV LRFYDPTAGI IMIDGQDIKK LKLKSLRRHI GLVQQEPALF ATTIYENILY GKEGASESEV MEAAKLANAH
1101: SFISSLPEGY STKVGERGIQ MSGGQRQRIA IARAVLKNPE ILLLDEATSA LDVESERVVQ QALDRLMRDR TTVVVAHRLS TIKNSDMISV IQDGKIIEQG
1201: SHNILVENKN GPYSKLISLQ QRQRHHP

Arabidopsis Description

ABCB10ABC transporter B family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SGY1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.