Factsheet for Bra032856.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032855.1-P	Field mustard	cytosol	9.52	100.0
CDY27639	Canola	plasma membrane	97.01	98.69
AT1G27940.1	Thale cress	peroxisome, plasma membrane, vacuole	90.15	89.72
VIT_18s0001g14660.t01	Wine grape	peroxisome, plasma membrane, vacuole	69.9	70.98
KRH17450	Soybean	plasma membrane	69.65	69.04
KRH05968	Soybean	plasma membrane	69.41	68.8
Bra039042.1-P	Field mustard	plasma membrane	50.85	50.32
Bra025359.1-P	Field mustard	plasma membrane	50.52	50.0
Bra013936.1-P	Field mustard	plasma membrane	49.07	49.27
Bra019135.1-P	Field mustard	plasma membrane	48.75	48.67
Bra019907.1-P	Field mustard	plasma membrane	47.78	48.33
Bra017216.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.67	45.07
Bra023087.1-P	Field mustard	cytosol, nucleus, plasma membrane	48.02	44.44
Bra025326.1-P	Field mustard	plasma membrane	44.07	43.89
Bra025328.1-P	Field mustard	endoplasmic reticulum, golgi	37.45	43.41
Bra025331.1-P	Field mustard	plasma membrane	38.82	42.23
Bra040475.1-P	Field mustard	cytosol	43.66	42.04
Bra003490.1-P	Field mustard	cytosol, nucleus, plasma membrane	43.66	41.87
Bra012621.1-P	Field mustard	plasma membrane	42.05	41.78
Bra030503.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.02	41.77
Bra002094.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.49	41.75
Bra033331.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.62	41.71
Bra004484.1-P	Field mustard	cytosol	43.02	41.51
Bra003445.1-P	Field mustard	peroxisome	41.81	41.31
Bra025425.1-P	Field mustard	peroxisome, plasma membrane, vacuole	40.36	40.29
Bra000136.1-P	Field mustard	cytosol, mitochondrion, peroxisome	41.57	36.71
Bra005036.1-P	Field mustard	mitochondrion	41.65	36.65
Bra017539.1-P	Field mustard	plasma membrane	30.43	36.57
Bra014756.1-P	Field mustard	cytosol, golgi, peroxisome	40.84	36.14

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra032856	EnsemblPlants:Bra032856.1	EnsemblPlants:Bra032856.1-P	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626
GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4EVM3	InterPro:P-loop_NTPase
PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221
PANTHER:PTHR24221:SF235	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000254252C
SEG:seg	:	:	:	:	:

Description

AT1G27940 (E=0.0) PGP13 | PGP13 (P-GLYCOPROTEIN 13); ATPase, coupled to transmembrane movement of substances

Coordinates

chrA09:+:12377211..12381907

Molecular Weight (calculated)

134368.0 Da

IEP (calculated)

9.345

GRAVY (calculated)

0.082

Length

1239 amino acids

Sequence
(BLAST)

0001: MDSTEPSSNG SIHTETDSKK KDSVSLMGLF GAADKLDCFL MILGGLGACT LGATLPLFFV FFGKMLDSLG NLSTDPKSLS SRVSKNALDL VYLGLVTFLS
0101: AWIGVACWTQ TGERQTARLR IKYLKAILAK DITFFDTEAR DSNLIFHISS DAILVQDAIG DKTGHVLRYL SQFVAGFVVG FLSVWQLTLL TLAVVPLIAI
0201: AGGGYAIIMS TISEKSEAAY ADAGKVAEEV ISQVRTVYAF VGEEKAVNSY SNSLKKALKL CKRSGLAKGL GVGLTYSLLF CAWALLLWYA SLLVRHGKTN
0301: GAKAFTTILN VIFSGFALGQ AAPSISAISK GRVAAANIFR MIGNKTLEGS ERLDNGTTLQ NVAGKIEFHQ VSFAYPSRPN MVFENLSFTI PSGKTFAFVG
0401: PSGSGKSTII SMVQRFYEPN SGEILLDGKD IKSLKLDWLR EQMGLVSQEP ALFATTIASN ILLGKENANM DQIIEASKAA NADSFIKSLP NGYNTQVGEG
0501: GTQLSGGQKQ RIAIARAVLR NPKILLLDEA TSALDAESEK IVQQALDNVM EKRTTLVVAH RLSTIRNVDK IVVLRNGQVV ETGSHSELLS RGGDYAALVN
0601: VQETEPQENP RSIMSETGKS QAGSSSSRRV SSSRRTSSFR EVQEKTDKDS NGEDLSSSST IWELIKLNAP EWPYALLGSI GAVLAGAQTP LFSMGIAYVL
0701: TAFYSPSPSV IKRDVDKVAI VFVGIAVVTA PIYLLQHYFY TLMGERLTSR VRLSLFSAIL SNEIGWFDLD ENNTGSLTSI LAADATLVRS ALADRLSTIV
0801: QNLSLTVTAL AIAFYYSWRV AAVVTSCFPL LIAAALTEQL FLKGFGGDYT RAYSRATSVA REAIENIRTV ASFGAEKQIS EQFACELSKP TKSAFLRGHI
0901: SGIGYGFSQF LAFCSYALGL WYVSVLIKHK ETNFSDSIKA FMVLIVTAFS VAETLALTPD IVKGTQALGS VFRVLHRETE IPPDQPNSRL VTQIKGDIEF
1001: RNVSFAYPTR HDVPIFQNLN LRVSARKSLA VVGPSGSGKS TVIGLIMRFY DADKGNLCID GKDIKTLNLR SLRKKLALVQ QEPALFSTTI YENIKYGTEN
1101: ASEAEIIEAA KAANAHEFIS RMEEGYKTHV GEKGVQLSGG QKQRVAIARA VLKNPSVLLL DEATSALDTT SEKLVQEALD KLMKGRTTVL VAHRLSTIRK
1201: ADTIAVLHKG KVVEKGSHRE LVSISNGHYK QLTSLQEVV

Best Arabidopsis Sequence Match ( AT1G27940.1 )
(BLAST)

0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL

Arabidopsis Description

ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.