Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84897 | Canola | cytosol | 9.61 | 99.15 |
| Bra032856.1-P | Field mustard | plasma membrane | 98.69 | 97.01 |
| CDX84896 | Canola | plasma membrane | 81.69 | 94.67 |
| AT1G27940.1 | Thale cress | peroxisome, plasma membrane, vacuole | 90.31 | 88.35 |
| VIT_18s0001g14660.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 69.62 | 69.51 |
| KRH17450 | Soybean | plasma membrane | 69.29 | 67.52 |
| KRH05968 | Soybean | plasma membrane | 69.05 | 67.28 |
| CDX86437 | Canola | cytosol | 7.39 | 60.4 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 2.79 | 50.0 |
| CDY00109 | Canola | plasma membrane | 50.82 | 49.72 |
| CDX86408 | Canola | plasma membrane | 50.41 | 49.64 |
| CDY20012 | Canola | plasma membrane | 50.9 | 49.48 |
| CDY65012 | Canola | plasma membrane | 50.82 | 49.4 |
| CDX94395 | Canola | plasma membrane | 49.34 | 48.7 |
| CDY37953 | Canola | plasma membrane | 48.11 | 47.84 |
| CDX93393 | Canola | plasma membrane | 48.03 | 47.76 |
| CDX92739 | Canola | plasma membrane | 48.52 | 47.62 |
| CDX89380 | Canola | plasma membrane | 49.26 | 47.06 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 42.94 | 46.08 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 48.03 | 43.72 |
| CDX79704 | Canola | plasma membrane | 47.87 | 43.48 |
| CDX86445 | Canola | plasma membrane | 44.17 | 43.25 |
| CDX67881 | Canola | cytosol | 42.53 | 43.13 |
| CDY25095 | Canola | cytosol | 42.12 | 42.54 |
| CDY27510 | Canola | cytosol | 41.87 | 42.54 |
| CDY04018 | Canola | plasma membrane | 43.19 | 42.39 |
| CDX85192 | Canola | plasma membrane | 44.01 | 42.24 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 43.76 | 42.17 |
| CDY48003 | Canola | cytosol | 41.22 | 42.11 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 37.68 | 42.07 |
| CDX80072 | Canola | cytosol | 41.22 | 41.9 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 43.68 | 41.89 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 43.43 | 41.85 |
| CDY15432 | Canola | cytosol | 41.87 | 41.67 |
| CDY24379 | Canola | plasma membrane | 39.41 | 41.06 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 41.87 | 41.03 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 39.41 | 40.96 |
| CDY58790 | Canola | peroxisome | 40.64 | 40.21 |
| CDY51560 | Canola | peroxisome | 40.8 | 39.73 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 29.39 | 36.35 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 41.22 | 35.99 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 41.38 | 35.97 |
| CDY07647 | Canola | cytosol | 41.3 | 35.9 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 41.46 | 35.87 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 40.8 | 35.5 |
| CDY65312 | Canola | cytosol | 40.64 | 35.38 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.89 | 31.94 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078GR09 | UniProt:A0A078GR09 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | EnsemblPlants:CDY27639 | ProteinID:CDY27639 |
| ProteinID:CDY27639.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00038394001 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 |
| ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF235 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI0004EDED30 | SEG:seg | : |
Description
BnaA09g27680DBnaA09g27680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR09]
Coordinates
chrLK032207:-:469206..474110
Molecular Weight (calculated)
131924.0 Da
IEP (calculated)
9.166
GRAVY (calculated)
0.072
Length
1218 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSTEPSSSG NIHTETDSKK KDSVSLMGLF GAADKLDCFL MILGGLGACT LGATLPLFFV FFGKMLDSLG NLSTDPKALS SRVSKNALDL VYLGLVTFLS
0101: AWIGVACWTQ TGERQTARLR INYLKAILAK DITFFDTEAR DSNLIFHISS DAILVQDAIG DKTGHFVAGF VVVVPLIAIA GGGYAIIMST ISEKSEAAYA
0201: DAGKVAEEVI SQVRTVYAFV GEEKAVNTYS NSLKKALKLC KRSGLAKGLG VGLTYSLLFC AWALLLWYAS LLVRHGKTNG AKAFTTILNV IFSGFALGQA
0301: APSISAISKG RVAAANIFRM IGNKTLEGSE RLDNGTTLQN VAGKIEFHQV SFAYPSRPNM VFENLSFTIP SGKTFAFVGP SGSGKSTIIS MVQRFYEPNS
0401: GEILLDGKDI KSLKLDWLRE QMGLVSQEPA LFATTIASNI LLGKENANMD QIIEASKAAN ADSFIKSLPN GYNTQVGEGG TQLSGGQKQR IAIARAVLRN
0501: PKILLLDEAT SALDAESEKI VQQALDNVME KRTTLVVAHR LSTIRNVDKI VVLRNGQVVE TGSHSELLSR GGDYAALVNV QETEPQENPR SIMSETGKSQ
0601: AGSSSSRRVS SSRRTSSFRE VQEKTDKDSN GEDLSSSSTI WELIKLNAPE WPYALLGSIG AVLAGAQTPL FSMGIAYVLT AFYSPSPSVI KRDVEKVAIV
0701: FVGIAVVTAP IYLLQHYFYT LMGERLTSRV RLSLFSAILS NEIGWFDLDE NNTGSLTSIL AADATLVRSA LADRLSTIVQ NLSLTVTALA IAFYYSWRVA
0801: AVVTSCFPLL IAAALTEQLF LKGFGGDYTR AYSRATSVAR EAIENIRTVA SFGAEKQISE QFACELSKPT KSSFLRGHIS GIGYGFSQFL AFCSYALGLW
0901: YVSVLIKHKE TNFSDSIKSF MVLIVTAFSV AETLALTPDI VKGTQALGSV FRVLHRETEI PPDQPNSRLV TQIKGDIEFR NVSFAYPARL DIPIFQNLNL
1001: RVSAGKSLAV VGPSGSGKST VIGLIMRFYD ADKGNICIDG KDIRTLNLRS LRKKLALVQQ EPALFSTTIY ENIKYGNENA SEAEIIEAAK AANAHEFISR
1101: MEEGYKTHVG EKGVQLSGGQ KQRVAIARAV LKNPSVLLLD EATSALDTTS EKLVQEALDK LMKGRTTVLV AHRLSTIRKA DTIAVLHKGR VVEKGSHREL
1201: VSISNGHYKQ LTSLQEVV
0101: AWIGVACWTQ TGERQTARLR INYLKAILAK DITFFDTEAR DSNLIFHISS DAILVQDAIG DKTGHFVAGF VVVVPLIAIA GGGYAIIMST ISEKSEAAYA
0201: DAGKVAEEVI SQVRTVYAFV GEEKAVNTYS NSLKKALKLC KRSGLAKGLG VGLTYSLLFC AWALLLWYAS LLVRHGKTNG AKAFTTILNV IFSGFALGQA
0301: APSISAISKG RVAAANIFRM IGNKTLEGSE RLDNGTTLQN VAGKIEFHQV SFAYPSRPNM VFENLSFTIP SGKTFAFVGP SGSGKSTIIS MVQRFYEPNS
0401: GEILLDGKDI KSLKLDWLRE QMGLVSQEPA LFATTIASNI LLGKENANMD QIIEASKAAN ADSFIKSLPN GYNTQVGEGG TQLSGGQKQR IAIARAVLRN
0501: PKILLLDEAT SALDAESEKI VQQALDNVME KRTTLVVAHR LSTIRNVDKI VVLRNGQVVE TGSHSELLSR GGDYAALVNV QETEPQENPR SIMSETGKSQ
0601: AGSSSSRRVS SSRRTSSFRE VQEKTDKDSN GEDLSSSSTI WELIKLNAPE WPYALLGSIG AVLAGAQTPL FSMGIAYVLT AFYSPSPSVI KRDVEKVAIV
0701: FVGIAVVTAP IYLLQHYFYT LMGERLTSRV RLSLFSAILS NEIGWFDLDE NNTGSLTSIL AADATLVRSA LADRLSTIVQ NLSLTVTALA IAFYYSWRVA
0801: AVVTSCFPLL IAAALTEQLF LKGFGGDYTR AYSRATSVAR EAIENIRTVA SFGAEKQISE QFACELSKPT KSSFLRGHIS GIGYGFSQFL AFCSYALGLW
0901: YVSVLIKHKE TNFSDSIKSF MVLIVTAFSV AETLALTPDI VKGTQALGSV FRVLHRETEI PPDQPNSRLV TQIKGDIEFR NVSFAYPARL DIPIFQNLNL
1001: RVSAGKSLAV VGPSGSGKST VIGLIMRFYD ADKGNICIDG KDIRTLNLRS LRKKLALVQQ EPALFSTTIY ENIKYGNENA SEAEIIEAAK AANAHEFISR
1101: MEEGYKTHVG EKGVQLSGGQ KQRVAIARAV LKNPSVLLLD EATSALDTTS EKLVQEALDK LMKGRTTVLV AHRLSTIRKA DTIAVLHKGR VVEKGSHREL
1201: VSISNGHYKQ LTSLQEVV
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.