Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013936.1-P Field mustard plasma membrane 96.24 99.43
CDX94395 Canola plasma membrane 96.08 99.27
AT4G25960.1 Thale cress plasma membrane 89.41 89.55
CDX92739 Canola plasma membrane 85.33 87.67
CDY42770 Canola golgi, plasma membrane, vacuole 77.41 86.96
CDX93393 Canola plasma membrane 77.18 80.33
CDY37953 Canola plasma membrane 77.1 80.24
VIT_02s0012g01660.t01 Wine grape plasma membrane 76.08 78.04
KRH74394 Soybean plasma membrane 75.06 76.81
KRH39563 Soybean peroxisome 74.75 76.55
Solyc08g076720.2.1 Tomato unclear 74.04 75.1
PGSC0003DMT400045176 Potato peroxisome 73.8 74.86
KRH45417 Soybean plasma membrane 73.49 74.72
EES05688 Sorghum plasma membrane 72.31 73.17
Zm00001d051514_P002 Maize mitochondrion 71.84 72.58
Os02t0693700-02 Rice plasma membrane 71.53 72.15
TraesCS6B01G291900.1 Wheat peroxisome 71.14 71.81
TraesCS6D01G250000.1 Wheat golgi 70.98 71.77
TraesCS6A01G264900.3 Wheat golgi 71.06 71.56
HORVU6Hr1G067170.3 Barley endoplasmic reticulum, vacuole 50.9 67.89
HORVU6Hr1G067200.1 Barley plastid 71.37 67.16
CDX84897 Canola cytosol 5.88 63.56
CDX86437 Canola cytosol 6.82 58.39
CDX86442 Canola cytosol, mitochondrion, plastid 2.98 55.88
CDX86408 Canola plasma membrane 49.25 50.77
CDY00109 Canola plasma membrane 49.41 50.6
CDY20012 Canola plasma membrane 49.57 50.44
CDY65012 Canola plasma membrane 49.33 50.2
CDY27639 Canola plasma membrane 47.06 49.26
CDY46744 Canola cytosol, peroxisome, plasma membrane 48.39 46.11
CDX79704 Canola plasma membrane 48.24 45.86
CDX84896 Canola plasma membrane 37.73 45.77
CDY35168 Canola golgi, peroxisome, plasma membrane 38.82 45.37
CDY25095 Canola cytosol 42.2 44.61
CDX67881 Canola cytosol 41.96 44.55
CDY27510 Canola cytosol 41.49 44.12
CDY48003 Canola cytosol 41.02 43.88
CDX80072 Canola cytosol 41.18 43.82
CDY15432 Canola cytosol 41.8 43.55
CDY24379 Canola plasma membrane 39.76 43.37
CDX89963 Canola cytosol, nucleus, plasma membrane 42.9 43.28
CDY15249 Canola cytosol, peroxisome, plasma membrane 42.9 43.07
CDY51307 Canola cytosol, peroxisome, plasma membrane 42.67 43.04
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 39.29 42.75
CDY58790 Canola peroxisome 41.25 42.73
CDY37776 Canola cytosol, peroxisome, plasma membrane 41.49 42.56
CDX86445 Canola plasma membrane 41.41 42.44
CDX85192 Canola plasma membrane 41.49 41.69
CDY04018 Canola plasma membrane 40.47 41.58
CDY51560 Canola peroxisome 40.78 41.57
GSMUA_Achr4P17010_001 Banana peroxisome 35.14 40.54
CDY64952 Canola peroxisome, plasma membrane, vacuole 28.78 37.26
CDY20443 Canola cytosol, mitochondrion, plasma membrane 40.16 36.55
CDY24958 Canola mitochondrion, plasma membrane, plastid 39.76 36.34
CDY07647 Canola cytosol 39.84 36.26
CDY53591 Canola cytosol, mitochondrion, plasma membrane 39.84 36.08
CDY65312 Canola cytosol 39.37 35.88
CDX76106 Canola cytosol, golgi, peroxisome 39.29 35.79
CDY21871 Canola endoplasmic reticulum, plasma membrane 1.73 30.56
Protein Annotations
MapMan:24.1.3.1.1Gene3D:3.40.50.300GO:A0A078DJK4InterPro:AAA+_ATPaseInterPro:ABC1_TM_domInterPro:ABC1_TM_sf
InterPro:ABC_transporter-likeInterPro:ABC_transporter_CSEnsemblPlants:CDX89380ProteinID:CDX89380ProteinID:CDX89380.1GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00149611001InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929
PANTHER:PTHR24221PANTHER:PTHR24221:SF415SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
UniParc:UPI0004EF32B3SEG:seg::::
Description
BnaA01g15130D
Coordinates
chrLK031858:-:1240045..1246151
Molecular Weight (calculated)
140385.0 Da
IEP (calculated)
9.224
GRAVY (calculated)
0.149
Length
1275 amino acids
Sequence
(BLAST)
0001: MYSLSSSCSL TTLPLNVSLY LFYLLFHHFP LQQLNTLFPV NMEASSDPAT KKEKQKATPK VSLLKLFSFA DFYDCVLMTL GSIGACIHGA SVPVFFIFFG
0101: KLINIIGLAY LYPHLASHKV AKYSLDFVYL SVAILFSSWL EVACWMHTGE RQAAKMRRAY LRSMLSQDIS LFDTEASTGE VISAITSDIL VVQDALSEKV
0201: GNFLHYISRF IAGFAIGFSS VWQISLVTLS IVPLIALAGG IYAFVAIGLI ARVRKSYIKA GEIAEEVIGN VRTVQAFTGE ERAVKLYREA LQNTFKYGRK
0301: AGLTKGLGLG SLHCVLFLSW ALLVWFTSVV VHKEIADGGK SFTTMLNVVI AGLSLGQAAP DISAFVRAKA AAYPIFKMIE RDTAAKTSAK TGRRLGKVDG
0401: HIQFKNVTFS YPSRPDVVIF DKLNISIPAG KIVALVGGSG SGKSTVISLI ERFYEPNSGA VWLDGNDIKD LDIKWLRGQI GLVNQEPALF ATTIRENIMY
0501: GKDDATNEEL GRAAKLSEAI SFINNLPEGF ETQVGERGIQ LSGGQKQRIA ISRAIVKNPS ILLLDEATSA LDAESEKSVQ EALDRVMVGR TTVVVAHRLS
0601: TVRNADIIAV VHEGKIVEFG NHENLIANPD GAYSALLRLQ EAASLQRNPS LTRTLSRQQS VKYSGDLSRT RTSFCSDRDS VTRQDGAEPT KKTKVTVGRL
0701: YSMIRPDWMY GLCGTICAFI AGSQMPLFAL GVSHSLVSYY EKDWVDTQKE VKKIAILFCC ASAITLIVYT IEHICFGTMG ERLTLRVREK MFSAILRNEI
0801: GWFDEVDNTS SMLASRLESD ATLLKTIVVD RSTILLQNLG LVVTSFVISF MLNWRLTLVV VATYPLVISG HISEKLFMQG YGGNLSKAYL KANMLAGESV
0901: SNIRTVAAFC AEDKILELYS RELLEPSKRS FRRGQTAGLF YGISQFFIFS SYGLALWYGS TLMDKGLSNF KSVMKTFMVL IVTALAMGET LALAPDLLKG
1001: NQMVASVFEI LDRKTQIVGE TSEELTNVEG MIELKAVHFS YPSRPDVVIF KDFDLIVRCG KSMALVGQSG SGKSSVISLI LRFYDPTAGK VMIEGKDIKK
1101: LDLKALRKHI GLVQQEPALF ATTIYENILY GNERATQSEV IEAATLANAH SFITSLPQGY STKVGERGVQ MSGGQRQRIA IARAILRNPE ILLLDEATSA
1201: LDIESERVVQ QALDRLMTNR TTVVVAHRLS TIQNADTISV LHGGKIVEQG SHHRLVQNKT GPYFKLISLQ QQQHP
Best Arabidopsis Sequence Match ( AT4G25960.1 )
(BLAST)
0001: MYISLIFFLS NHFPPLISIP IFIFLSFSSP TNYTHLKLKK MQPSGDPAPE KEKEMTQPKV SLLKLFSFAD FYDCVLMTLG SVGACIHGAS VPIFFIFFGK
0101: LINIIGLAYL FPKQASHRVA KYSLDFVYLS VAILFSSWLE VACWMHTGER QAAKMRRAYL RSMLSQDISL FDTEASTGEV ISAITSDILV VQDALSEKVG
0201: NFLHYISRFI AGFAIGFTSV WQISLVTLSI VPLIALAGGI YAFVAIGLIA RVRKSYIKAG EIAEEVIGNV RTVQAFTGEE RAVRLYREAL ENTYKYGRKA
0301: GLTKGLGLGS MHCVLFLSWA LLVWFTSVVV HKDIADGGKS FTTMLNVVIA GLSLGQAAPD ISAFVRAKAA AYPIFKMIER NTVTKTSAKS GRKLGKVDGH
0401: IQFKDATFSY PSRPDVVIFD RLNLAIPAGK IVALVGGSGS GKSTVISLIE RFYEPISGAV LLDGNNISEL DIKWLRGQIG LVNQEPALFA TTIRENILYG
0501: KDDATAEEIT RAAKLSEAIS FINNLPEGFE TQVGERGIQL SGGQKQRIAI SRAIVKNPSI LLLDEATSAL DAESEKSVQE ALDRVMVGRT TVVVAHRLST
0601: VRNADIIAVV HEGKIVEFGN HENLISNPDG AYSSLLRLQE TASLQRNPSL NRTLSRPHSI KYSRELSRTR SSFCSERESV TRPDGADPSK KVKVTVGRLY
0701: SMIRPDWMYG VCGTICAFIA GSQMPLFALG VSQALVSYYS GWDETQKEIK KIAILFCCAS VITLIVYTIE HICFGTMGER LTLRVRENMF RAILKNEIGW
0801: FDEVDNTSSM LASRLESDAT LLKTIVVDRS TILLQNLGLV VTSFIIAFIL NWRLTLVVLA TYPLVISGHI SEKLFMQGYG GDLNKAYLKA NMLAGESVSN
0901: IRTVAAFCAE EKILELYSRE LLEPSKSSFR RGQIAGLFYG VSQFFIFSSY GLALWYGSTL MDKGLAGFKS VMKTFMVLIV TALAMGETLA LAPDLLKGNQ
1001: MVASVFEILD RKTQIVGETS EELNNVEGTI ELKGVHFSYP SRPDVVIFRD FDLIVRAGKS MALVGQSGSG KSSVISLILR FYDPTAGKVM IEGKDIKKLD
1101: LKALRKHIGL VQQEPALFAT TIYENILYGN EGASQSEVVE SAMLANAHSF ITSLPEGYST KVGERGVQMS GGQRQRIAIA RAILKNPAIL LLDEATSALD
1201: VESERVVQQA LDRLMANRTT VVVAHRLSTI KNADTISVLH GGKIVEQGSH RKLVLNKSGP YFKLISLQQQ QQP
Arabidopsis Description
ABCB2ABC transporter B family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.