CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 4
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24379	Canola	plasma membrane	96.16	96.41
CDY58790	Canola	peroxisome	89.93	85.62
CDY51560	Canola	peroxisome	90.36	84.65
AT4G01830.1	Thale cress	golgi, plasma membrane, vacuole	82.85	78.94
AT4G01820.1	Thale cress	peroxisome, plasma membrane, vacuole	81.57	77.79
CDX89963	Canola	cytosol, nucleus, plasma membrane	77.39	71.76
CDY51307	Canola	cytosol, peroxisome, plasma membrane	77.05	71.44
CDY15249	Canola	cytosol, peroxisome, plasma membrane	77.3	71.34
CDY15432	Canola	cytosol	74.23	71.08
GSMUA_Achr8P29860_001	Banana	endoplasmic reticulum	63.05	66.82
Os05t0137200-01	Rice	plasma membrane	21.93	65.39
CDY25095	Canola	cytosol	67.24	65.34
CDX67881	Canola	cytosol	66.89	65.28
CDY27510	Canola	cytosol	66.21	64.72
CDX80072	Canola	cytosol	65.7	64.27
VIT_07s0005g02660.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.08	64.23
CDY48003	Canola	cytosol	65.02	63.93
CDY37776	Canola	cytosol, peroxisome, plasma membrane	67.24	63.4
GSMUA_Achr1P25070_001	Banana	plasma membrane	48.98	63.36
KRH69152	Soybean	cytosol, peroxisome, plasma membrane	69.11	63.18
PGSC0003DMT400018820	Potato	cytosol, peroxisome, plasma membrane	69.37	63.17
KRH33644	Soybean	cytosol, peroxisome, plasma membrane	69.03	63.1
KRH68334	Soybean	cytosol, peroxisome, plasma membrane	68.6	62.67
OQU77362	Sorghum	mitochondrion, plasma membrane	61.43	62.39
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	67.24	61.13
PGSC0003DMT400018812	Potato	cytosol, peroxisome, plasma membrane	61.35	59.32
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	64.68	59.31
KXG32330	Sorghum	plastid	64.68	59.22
CDX84897	Canola	cytosol	5.89	58.47
Solyc06g009290.2.1	Tomato	nucleus	68.6	57.43
TraesCS1A01G081300.1	Wheat	unclear	62.46	57.37
CDY35168	Canola	golgi, peroxisome, plasma membrane	53.33	57.29
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	62.29	57.25
TraesCS1D01G082900.2	Wheat	cytosol, peroxisome, plasma membrane	62.29	57.21
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	64.59	56.7
HORVU1Hr1G017460.3	Barley	plasma membrane	62.03	56.66
CDX86437	Canola	cytosol	7.17	56.38
GSMUA_Achr9P16700_001	Banana	plasma membrane	59.13	54.57
CDX86442	Canola	cytosol, mitochondrion, plastid	3.07	52.94
CDX93393	Canola	plasma membrane	42.58	40.73
CDY37953	Canola	plasma membrane	42.49	40.65
CDY00109	Canola	plasma membrane	43.17	40.64
CDX94395	Canola	plasma membrane	42.75	40.6
CDX86408	Canola	plasma membrane	42.66	40.42
CDY20012	Canola	plasma membrane	43.17	40.38
CDY65012	Canola	plasma membrane	43.09	40.3
CDX92739	Canola	plasma membrane	42.49	40.13
CDY27639	Canola	plasma membrane	40.96	39.41
CDX89380	Canola	plasma membrane	42.75	39.29
CDX86445	Canola	plasma membrane	41.04	38.67
CDY04018	Canola	plasma membrane	40.36	38.11
CDX85192	Canola	plasma membrane	41.13	37.98
CDY42770	Canola	golgi, plasma membrane, vacuole	36.01	37.18
CDY46744	Canola	cytosol, peroxisome, plasma membrane	41.89	36.7
CDX79704	Canola	plasma membrane	41.89	36.61
CDX84896	Canola	plasma membrane	31.74	35.39
CDY64952	Canola	peroxisome, plasma membrane, vacuole	29.1	34.62
CDY20443	Canola	cytosol, mitochondrion, plasma membrane	37.97	31.76
CDY24958	Canola	mitochondrion, plasma membrane, plastid	37.71	31.68
CDY07647	Canola	cytosol	37.63	31.48
CDY53591	Canola	cytosol, mitochondrion, plasma membrane	37.8	31.46
CDY65312	Canola	cytosol	37.54	31.45
CDX76106	Canola	cytosol, golgi, peroxisome	37.29	31.21
CDY21871	Canola	endoplasmic reticulum, plasma membrane	1.45	23.61

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	GO:A0A078G758	UniProt:A0A078G758	InterPro:AAA+_ATPase
InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlants:CDY20842	ProteinID:CDY20842
ProteinID:CDY20842.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00013119001	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF292	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0004EDD4A9	SEG:seg	:	:

Description

BnaC07g06910DBnaC07g06910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G758]

Coordinates

chrLK032112:-:611257..617610

Molecular Weight (calculated)

127175.0 Da

IEP (calculated)

7.949

GRAVY (calculated)

0.222

Length

1172 amino acids

Sequence
(BLAST)

0001: MISFVELISK ICLKFVYLGL GTFVAAFLQV SCWVITGERQ AARIRSLYLK TILRQDIVFF DVETNTGEVV GRMSGDTVLI LDAMGEKVGK FIQLFVTFLG
0101: GYALAFVKGW LLTLVMLTSI PLLAMAGAAM SLIFTKASSQ QQAAYAKAST IVEQTCGSIR TVASFTGEKQ ATSSYKELIN SAYKSSVKQG LSTGLGFGVM
0201: FLVFFCSYAL AIWFGGEMIL RKGYTGGAVI NVMIIVVASS MDNIPHRSVK IIKQCMSEMN QFARSLGQAA PCLTSFAAGQ AAAYKMFETI KRKPVIDSFD
0301: LNGKVLEDIQ GEIELRDVCF SYPARPREEV FGGFSLMIPS GKTTALVGES GSGKSTVISL IERFYDPNSG QVLIDGVDLK EFQLKWIRGK IGLVSQEPVL
0401: FSSSIMENIG YGKEGARVQE IEAAAKLANA AKFIDKLPWG LETMVGEHGT QLSGGQKQRI AIARAILKDP RILLLDEATS ALDAESERVV QEALDRVMVN
0501: RTTVIVAHRL STVRNADMIA VLHRGKIVEE GSHLELLKDH EGAYSQLIRL QEINTESRRL EISNGQQDGS IRNESSRGNS VSRMHNDDGS VSVLGLLAGQ
0601: ENTEKPKDMP QDVSITRIAA LNKPEAPILI LGTLVCALDG AIFPIFGLLF AKVIIAFFQP PHELRSDSRF WSIIFVLLGV LSLVVYPIHM SLFAVAGGRL
0701: IRRIRSMCFE KVVHMEVGWF DEPENSSGAM GARLSADAAL IRTLVGDSLA LTVKNVASAV AGIIIAFVIS WELAVIILVM IPLTGINNYV QVKFMKGFSA
0801: DAKTKYEEAS QVANDAVGSI RTVASFCAEE KVIEMYKKRC EDSIKSGTKQ GVVAGLGFGL SFFVLYSVYA ACFYAGARLV KDGRTTYNGV FQVFLALTMT
0901: TIGISAASSF APDSGKAKSA AVSVFGIIDR KSKIDSRDES GMVLENVKGD IDFCNIFTVA LVGESGSGKS TVISLLQRFY DPDSGHITLD GVELKKLQLK
1001: WLRKQMGLVG QEPVLFNDTI RANIAYGKGG EEATEAEIVA ASELCNAHKF ISSIQQGYDT VVGERGIQLS GGQKQRVAIA RAIVKEPKIL LLDEATSALD
1101: AESERVVQDA LDQVMVNRTT IVVAHRLSTI KNADVIAVVK NGVIAEKGTH ETLMNIKGGV YASLVQLHMS AF

Best Arabidopsis Sequence Match ( AT1G02520.1 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.