Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76106 | Canola | cytosol, golgi, peroxisome | 97.57 | 97.5 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 93.85 | 93.25 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 89.14 | 89.39 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 89.35 | 89.22 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 89.64 | 89.06 |
| CDY07647 | Canola | cytosol | 88.99 | 88.87 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 6.86 | 86.49 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 79.2 | 85.23 |
| KRG92957 | Soybean | nucleus | 84.35 | 84.35 |
| KRH01590 | Soybean | mitochondrion | 84.49 | 84.31 |
| KRH70512 | Soybean | extracellular | 84.49 | 84.31 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 77.41 | 84.28 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 84.13 | 84.13 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 73.84 | 82.51 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 78.34 | 78.23 |
| TraesCS3A01G536300.1 | Wheat | cytosol, plasma membrane, vacuole | 77.98 | 77.87 |
| TraesCS3D01G541700.1 | Wheat | cytosol, plasma membrane, vacuole | 77.91 | 77.47 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 77.77 | 77.16 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 77.34 | 77.01 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 76.63 | 76.63 |
| Os03t0280000-01 | Rice | plasma membrane | 77.13 | 76.47 |
| EER92449 | Sorghum | plasma membrane | 76.84 | 76.08 |
| Zm00001d047780_P002 | Maize | plasma membrane | 76.77 | 76.01 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 76.41 | 75.87 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 76.41 | 75.87 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 76.2 | 75.66 |
| CDX84897 | Canola | cytosol | 4.07 | 48.31 |
| CDX86437 | Canola | cytosol | 4.79 | 44.97 |
| CDY00109 | Canola | plasma membrane | 37.46 | 42.09 |
| CDY20012 | Canola | plasma membrane | 37.53 | 41.9 |
| CDX86408 | Canola | plasma membrane | 37.03 | 41.88 |
| CDX93393 | Canola | plasma membrane | 36.31 | 41.47 |
| CDY65012 | Canola | plasma membrane | 37.1 | 41.42 |
| CDY37953 | Canola | plasma membrane | 36.1 | 41.22 |
| CDX94395 | Canola | plasma membrane | 35.88 | 40.68 |
| CDY27639 | Canola | plasma membrane | 35.38 | 40.64 |
| CDX92739 | Canola | plasma membrane | 36.03 | 40.61 |
| CDY42770 | Canola | golgi, plasma membrane, vacuole | 32.38 | 39.91 |
| CDY46744 | Canola | cytosol, peroxisome, plasma membrane | 38.1 | 39.84 |
| CDX79704 | Canola | plasma membrane | 38.17 | 39.82 |
| CDX89380 | Canola | plasma membrane | 35.88 | 39.37 |
| CDX67881 | Canola | cytosol | 33.74 | 39.3 |
| CDY25095 | Canola | cytosol | 33.74 | 39.14 |
| CDX80072 | Canola | cytosol | 33.24 | 38.81 |
| CDY27510 | Canola | cytosol | 33.17 | 38.7 |
| CDY48003 | Canola | cytosol | 32.81 | 38.51 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 33.88 | 38.13 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 34.31 | 37.97 |
| CDX86445 | Canola | plasma membrane | 33.74 | 37.94 |
| CDY15432 | Canola | cytosol | 33.17 | 37.91 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 34.17 | 37.82 |
| CDX84896 | Canola | plasma membrane | 28.38 | 37.77 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 29.45 | 37.76 |
| CDY58790 | Canola | peroxisome | 33.17 | 37.69 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 34.17 | 37.64 |
| CDY04018 | Canola | plasma membrane | 33.38 | 37.63 |
| CDY24379 | Canola | plasma membrane | 31.38 | 37.55 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 31.45 | 37.54 |
| CDY51560 | Canola | peroxisome | 33.31 | 37.25 |
| CDX85192 | Canola | plasma membrane | 33.52 | 36.96 |
| CDX86442 | Canola | cytosol, mitochondrion, plastid | 1.79 | 36.76 |
| CDY64952 | Canola | peroxisome, plasma membrane, vacuole | 22.52 | 31.98 |
| CDY21871 | Canola | endoplasmic reticulum, plasma membrane | 1.57 | 30.56 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | GO:A0A078JIY6 | UniProt:A0A078JIY6 | InterPro:AAA+_ATPase |
| InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | EnsemblPlants:CDY65312 | ProteinID:CDY65312 | ProteinID:CDY65312.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00045588001 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24222 | PANTHER:PTHR24222:SF21 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI0004EDEE4B | SEG:seg | : | : | : | : |
Description
BnaCnng46600DBnaCnng46600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIY6]
Coordinates
chrLK034728:+:10233..16206
Molecular Weight (calculated)
154415.0 Da
IEP (calculated)
5.845
GRAVY (calculated)
0.076
Length
1399 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYPDPSET GGTATAAQAE DDEELEEEPD EVEPPPAAVP FSQLFACADS FDWVLMILGS VAAAAHGSAL
0101: IVYLHYFAKI VEVLAFSGER SEDQYDRLVE LSLTIVYIAA GVFVSGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFIS GLVIGFVNCW EIALITLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAG IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRFGIMIS LVQGLGLGFT YGLAICSCAL QLWIGRFFVT SGRANGGEII AALFAVILSG LGLNQAATNF YSFDQGRIAA YRLFEMITPS SSVANQEGAV
0401: PASVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPAKKAVA LAGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: RENIAYGRDA TLDKIEEAAK IAHAHTFISS LEKGYETQVG RAGLAMTEEQ KIKLSIARAV LLNPTILLLD EVTEGLDFEA ERIVQEALDL LMLGRSTIII
0601: ARRLSLIKNA DYIAVMEEGQ LVEMGTHDEL INLGGLYAEL LKCEEATKLP RRMPVRNYKE SSVFQIERDS SAGCVQEPSP PKMIKSPSLQ RGNGVFRPQD
0701: LCFYTEESPN DHNPAAPEKM GEHGLPLDDT DKEPTMKRQD SFEMRLPELP KIDVHCPQQK SNGSDPESPV SPLLTSDPKN ERSHSQTFSR PPSSSDDTKA
0801: NGKDAQHKES PSFWRLAQLS FPEWLYALLG SVGAAVFGSF SPLLAYVMAL VVTEYYKSKG GHLREQVDKW CLILAGMGIV TVVANFLQHF YFGIMGEKTT
0901: ERVRRMMFSA MLRNEVGWFD HEDNSPDTLS MRLANDATFV RAAFSNRLSI FIQDSFAVIV AFLIGLLLGW RLALVALATL PILSLSAIAQ KLWLSGFSKG
1001: IQEMHRKASL VLEDAVRNIY TVVAFCAGNK VMELYRMQLQ RILRQSFLHG MAIGFAFGFS QFLLFACNAL LLWCTALSVK RGYMKLPTAI TEYMVFSFAT
1101: FALVEPFGLA PYILKRRKSL ISVFEIIDRV PTIEPDDNSA LKPPNVYGSI ELKNIDFCYP SRPEVLVLSN FSLKVSGGQT LAVVGVSGSG KSTIISLVER
1201: YYDPVAGQVL LDGRDLKLYN LRWLRSHMGL VQQEPIIFST TIRDNIIYAR HNASEAEMKE AARIANAHHF ISSLPHGYDT HVGMRGVELT PGQKQRIAIA
1301: RVVLKNAPII LIDEASSSIE SESSRVVQEA LDTLIMGNKT TILIAHRAAM MRHVDNIVVL NGGRIVEEGT HDALAAKNGL YVRLMQPHFG KGLRQHRLI
0101: IVYLHYFAKI VEVLAFSGER SEDQYDRLVE LSLTIVYIAA GVFVSGWIEV SCWILTGERQ TAVIRSKYVQ VLLNQDMSFF DTYGNNGDIV SQVLSDVLLI
0201: QSALSEKVGN YIHNMATFIS GLVIGFVNCW EIALITLATG PFIVAAGGIS NIFLHRLAEN IQDAYAEAAG IAEQAISYIR TLYAFTNETL AKYSYATSLQ
0301: ATLRFGIMIS LVQGLGLGFT YGLAICSCAL QLWIGRFFVT SGRANGGEII AALFAVILSG LGLNQAATNF YSFDQGRIAA YRLFEMITPS SSVANQEGAV
0401: PASVQGNIEF RNVYFSYLSR PEIPILSGFY LTVPAKKAVA LAGRNGSGKS SIIPLMERFY DPTLGEVLLD GENIKNLKLE WLRSQIGLVT QEPALLSLSI
0501: RENIAYGRDA TLDKIEEAAK IAHAHTFISS LEKGYETQVG RAGLAMTEEQ KIKLSIARAV LLNPTILLLD EVTEGLDFEA ERIVQEALDL LMLGRSTIII
0601: ARRLSLIKNA DYIAVMEEGQ LVEMGTHDEL INLGGLYAEL LKCEEATKLP RRMPVRNYKE SSVFQIERDS SAGCVQEPSP PKMIKSPSLQ RGNGVFRPQD
0701: LCFYTEESPN DHNPAAPEKM GEHGLPLDDT DKEPTMKRQD SFEMRLPELP KIDVHCPQQK SNGSDPESPV SPLLTSDPKN ERSHSQTFSR PPSSSDDTKA
0801: NGKDAQHKES PSFWRLAQLS FPEWLYALLG SVGAAVFGSF SPLLAYVMAL VVTEYYKSKG GHLREQVDKW CLILAGMGIV TVVANFLQHF YFGIMGEKTT
0901: ERVRRMMFSA MLRNEVGWFD HEDNSPDTLS MRLANDATFV RAAFSNRLSI FIQDSFAVIV AFLIGLLLGW RLALVALATL PILSLSAIAQ KLWLSGFSKG
1001: IQEMHRKASL VLEDAVRNIY TVVAFCAGNK VMELYRMQLQ RILRQSFLHG MAIGFAFGFS QFLLFACNAL LLWCTALSVK RGYMKLPTAI TEYMVFSFAT
1101: FALVEPFGLA PYILKRRKSL ISVFEIIDRV PTIEPDDNSA LKPPNVYGSI ELKNIDFCYP SRPEVLVLSN FSLKVSGGQT LAVVGVSGSG KSTIISLVER
1201: YYDPVAGQVL LDGRDLKLYN LRWLRSHMGL VQQEPIIFST TIRDNIIYAR HNASEAEMKE AARIANAHHF ISSLPHGYDT HVGMRGVELT PGQKQRIAIA
1301: RVVLKNAPII LIDEASSSIE SESSRVVQEA LDTLIMGNKT TILIAHRAAM MRHVDNIVVL NGGRIVEEGT HDALAAKNGL YVRLMQPHFG KGLRQHRLI
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.