Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 4
- golgi 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047780_P002 | Maize | plasma membrane | 97.45 | 97.45 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 96.32 | 97.28 |
| Os03t0280000-01 | Rice | plasma membrane | 94.48 | 94.61 |
| TraesCS4A01G101600.3 | Wheat | cytosol, plasma membrane, plastid | 93.7 | 93.97 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 93.56 | 93.83 |
| TraesCS4D01G203900.2 | Wheat | cytosol, plasma membrane, plastid | 93.49 | 93.75 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 93.49 | 93.75 |
| GSMUA_Achr3P17720_001 | Banana | peroxisome | 75.73 | 85.46 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 81.25 | 81.94 |
| Solyc04g010310.2.1 | Tomato | plasma membrane | 73.81 | 81.17 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 74.52 | 81.0 |
| KRG92957 | Soybean | nucleus | 79.12 | 79.91 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 78.91 | 79.7 |
| KRH70512 | Soybean | extracellular | 78.49 | 79.1 |
| KRH01590 | Soybean | mitochondrion | 78.41 | 79.03 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 76.72 | 77.71 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 77.28 | 77.56 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 76.86 | 77.52 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 76.79 | 77.22 |
| CDY07647 | Canola | cytosol | 76.5 | 77.16 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 76.79 | 77.11 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 76.79 | 77.06 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 76.5 | 77.05 |
| Bra005036.1-P | Field mustard | mitochondrion | 76.72 | 76.99 |
| CDY65312 | Canola | cytosol | 76.08 | 76.84 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 76.01 | 76.71 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 75.94 | 76.64 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 38.92 | 43.44 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 38.36 | 42.95 |
| EES05688 | Sorghum | plasma membrane | 37.23 | 41.75 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 32.27 | 39.51 |
| OQU84543 | Sorghum | endoplasmic reticulum, plasma membrane | 33.97 | 38.84 |
| KXG32330 | Sorghum | plastid | 34.54 | 38.12 |
| KXG33192 | Sorghum | cytosol | 33.97 | 37.83 |
| EES05229 | Sorghum | plasma membrane | 33.26 | 37.78 |
| KXG35311 | Sorghum | plasma membrane | 32.91 | 37.05 |
| EES01319 | Sorghum | cytosol | 32.84 | 36.42 |
| KXG32655 | Sorghum | peroxisome | 33.26 | 36.41 |
| OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 32.27 | 36.19 |
| OQU79903 | Sorghum | peroxisome | 30.5 | 34.02 |
| OQU80682 | Sorghum | plasma membrane | 36.87 | 33.81 |
| KXG25805 | Sorghum | peroxisome, plastid | 30.22 | 27.58 |
| OQU78384 | Sorghum | plasma membrane | 34.32 | 25.72 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | EntrezGene:8081469 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | UniProt:C5WPA9 | ncoils:Coil | EnsemblPlants:EER92449 | ProteinID:EER92449 |
| ProteinID:EER92449.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24222 |
| PANTHER:PTHR24222:SF27 | SMART:SM00382 | EnsemblPlantsGene:SORBI_3001G415300 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI0001A82C70 | RefSeq:XP_002465451.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:69686119..69694308
Molecular Weight (calculated)
156245.0 Da
IEP (calculated)
6.349
GRAVY (calculated)
0.023
Length
1413 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVPAGLFGWA SPHVQPLTPV SEVSEPPESP SPYGDGPVGD AGVGAREGEG AGGGEEEVED DEVEPPPAAV SFWRLFEFAD GVDWALMAVG ALAAAAHGAA
0101: LVVYLHYFGR ALNLLDSERV GSSLYGRGDE LLRRFKEHAL YIVFIAAGVF VAGWIEVSCW ILTGERQTAV IRSKYVQVLL NQDMSFFDTY GNNGDIVSQV
0201: LSDVLLIQSA ISEKVGNYIH NMATFAGGLI VGLLNCWQIA LLTLATGPLI VAAGGISNIF LHRLAENIQD AYAEAASIAE QAISYIRTLY AFTNETLAKY
0301: SYATSLQATL RYGILISLVQ GIGLGFTYGL AICSCALQLW VGRHLIHRRK ADGGEVVVAL FSVILSGLGL NQAATNFYSF EQGRIAAYRL YEMISRSTSS
0401: TNQEGTTLPQ VQGNIEFRNV YFSYLSRPEI PILSGFFLTV PARKTVALVG RNGSGKSSII PLMERFYDPT LGEVLLDGEN IKNLKVEWLR SQIGLVTQEP
0501: ALLSLSIREN IAYGRSATFD QIEEAAKTAH AHGFISSLEK GYETQVGRAG IALTDEQKIK ISIARAVLSN PSILLLDEVT GGLDFEAEKA VQEALDVLML
0601: GRSTIIIARR LCLIKNADYI AVMEEGHLVE MGTHDELLNL DGLYAELLRC EEATKLPKRM PTKNSRERKS LQIEDTSVSQ YFQESSSPKM AKSPSLQRTH
0701: GMLQFWRSDT NRNSHESPKD RSPPSEQTMD NGIPMVAIET ERTPSIKRQD SFEMKLPDLP KVDVHPIQRQ SSKNSEPDSP ISPLLTSDPK NERSHSQTFS
0801: RPQSERDDTS SEHSELDEVQ HQKPPSFWRL ATLSIAEWPY ALLGTIGAAI FGSFNPLLAY TIALIVSAYY QIEIRDMRHE VNRWCLFIVG MGVITVLVNW
0901: LQHFYFGIMG EKMTERIRRM MFSAMLRNEV GWFDKEENNA DTLSMRLAND ATFVRAAFSN RLSIFIQDTA AVSVALLIGM LLEWRVALIA LATLPVLVIS
1001: AIAQKLWLAG FSRGIQEMHR KASLVLEDAV RNIYTVVAFC AGDKIMELYR LHLGKILKQS LVQGLAIGFG FGLSQFLLFA CNALLLWYTA ISVDQQRLTI
1101: ATGLKEYILF SFASFALVEP FGLAPYILKR RKSLTSVFEI IDREPKIDPD DTTGLKPPNV YGSIEFKNVD FSFPARPDIL VLSNFNLKVS GGQTVAVVGV
1201: SGSGKSTVIS LIERFYDPVS GQVLLDGRDL KSFNLRWLRS HMGLIQQDPV IFSTTIRENI IYARHNATEA EMKEAARIAN AHHFISSLPH GYDTHVGMRG
1301: VDLTPGQKQR IAIARVVLKN APILLLDEAS SAIESESSRV VQEALDTLVM GNKTTILIAH RAAMMKHVDN IVVLNGGRIV EQGTHDSLMD QNGLYVRLMQ
1401: PHFGKGLRQH RLM
0101: LVVYLHYFGR ALNLLDSERV GSSLYGRGDE LLRRFKEHAL YIVFIAAGVF VAGWIEVSCW ILTGERQTAV IRSKYVQVLL NQDMSFFDTY GNNGDIVSQV
0201: LSDVLLIQSA ISEKVGNYIH NMATFAGGLI VGLLNCWQIA LLTLATGPLI VAAGGISNIF LHRLAENIQD AYAEAASIAE QAISYIRTLY AFTNETLAKY
0301: SYATSLQATL RYGILISLVQ GIGLGFTYGL AICSCALQLW VGRHLIHRRK ADGGEVVVAL FSVILSGLGL NQAATNFYSF EQGRIAAYRL YEMISRSTSS
0401: TNQEGTTLPQ VQGNIEFRNV YFSYLSRPEI PILSGFFLTV PARKTVALVG RNGSGKSSII PLMERFYDPT LGEVLLDGEN IKNLKVEWLR SQIGLVTQEP
0501: ALLSLSIREN IAYGRSATFD QIEEAAKTAH AHGFISSLEK GYETQVGRAG IALTDEQKIK ISIARAVLSN PSILLLDEVT GGLDFEAEKA VQEALDVLML
0601: GRSTIIIARR LCLIKNADYI AVMEEGHLVE MGTHDELLNL DGLYAELLRC EEATKLPKRM PTKNSRERKS LQIEDTSVSQ YFQESSSPKM AKSPSLQRTH
0701: GMLQFWRSDT NRNSHESPKD RSPPSEQTMD NGIPMVAIET ERTPSIKRQD SFEMKLPDLP KVDVHPIQRQ SSKNSEPDSP ISPLLTSDPK NERSHSQTFS
0801: RPQSERDDTS SEHSELDEVQ HQKPPSFWRL ATLSIAEWPY ALLGTIGAAI FGSFNPLLAY TIALIVSAYY QIEIRDMRHE VNRWCLFIVG MGVITVLVNW
0901: LQHFYFGIMG EKMTERIRRM MFSAMLRNEV GWFDKEENNA DTLSMRLAND ATFVRAAFSN RLSIFIQDTA AVSVALLIGM LLEWRVALIA LATLPVLVIS
1001: AIAQKLWLAG FSRGIQEMHR KASLVLEDAV RNIYTVVAFC AGDKIMELYR LHLGKILKQS LVQGLAIGFG FGLSQFLLFA CNALLLWYTA ISVDQQRLTI
1101: ATGLKEYILF SFASFALVEP FGLAPYILKR RKSLTSVFEI IDREPKIDPD DTTGLKPPNV YGSIEFKNVD FSFPARPDIL VLSNFNLKVS GGQTVAVVGV
1201: SGSGKSTVIS LIERFYDPVS GQVLLDGRDL KSFNLRWLRS HMGLIQQDPV IFSTTIRENI IYARHNATEA EMKEAARIAN AHHFISSLPH GYDTHVGMRG
1301: VDLTPGQKQR IAIARVVLKN APILLLDEAS SAIESESSRV VQEALDTLVM GNKTTILIAH RAAMMKHVDN IVVLNGGRIV EQGTHDSLMD QNGLYVRLMQ
1401: PHFGKGLRQH RLM
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.