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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 1
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:mitochondrion
Plant-mPloc:cytosol, plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
 mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH70512 Soybean extracellular 97.65 97.65
KRH36206 Soybean cytosol, golgi, plastid 89.87 90.06
KRG92957 Soybean nucleus 89.8 89.99
VIT_13s0019g00310.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 81.38 87.77
Solyc04g010310.2.1 Tomato plasma membrane 79.74 87.0
HORVU3Hr1G117250.1 Barley mitochondrion 6.85 86.49
GSMUA_Achr3P17720_001 Banana peroxisome 76.75 85.94
CDY24958 Canola mitochondrion, plasma membrane, plastid 84.66 85.09
CDY20443 Canola cytosol, mitochondrion, plasma membrane 84.81 84.87
CDY53591 Canola cytosol, mitochondrion, plasma membrane 84.95 84.59
CDX76106 Canola cytosol, golgi, peroxisome 84.45 84.57
Bra005036.1-P Field mustard mitochondrion 84.88 84.52
Bra014756.1-P Field mustard cytosol, golgi, peroxisome 84.38 84.5
CDY65312 Canola cytosol 84.31 84.49
AT3G55320.1 Thale cress cytosol, peroxisome, plasma membrane 84.66 84.3
AT2G39480.1 Thale cress cytosol, mitochondrion, plasma membrane 84.59 84.29
Bra000136.1-P Field mustard cytosol, mitochondrion, peroxisome 84.31 84.25
CDY07647 Canola cytosol 84.17 84.23
KXG34231 Sorghum cytosol, plasma membrane, vacuole 80.03 80.09
TraesCS3A01G536300.1 Wheat cytosol, plasma membrane, vacuole 79.67 79.73
TraesCS3D01G541700.1 Wheat cytosol, plasma membrane, vacuole 79.74 79.46
TraesCS3B01G607600.1 Wheat cytosol, plasma membrane, vacuole 79.46 79.01
Zm00001d041947_P001 Maize cytosol, peroxisome, plasma membrane 78.74 78.58
Os03t0280000-01 Rice plasma membrane 79.03 78.53
EER92449 Sorghum plasma membrane 79.03 78.41
Zm00001d028671_P002 Maize cytosol, plasma membrane, vacuole 78.1 78.27
TraesCS4B01G203000.1 Wheat cytosol, plasma membrane, plastid 78.46 78.07
TraesCS4A01G101600.3 Wheat cytosol, plasma membrane, plastid 78.46 78.07
Zm00001d047780_P002 Maize plasma membrane 78.6 77.99
TraesCS4D01G203900.2 Wheat cytosol, plasma membrane, plastid 78.25 77.86
KRH18485 Soybean endoplasmic reticulum, mitochondrion 37.52 42.11
KRH05968 Soybean plasma membrane 37.52 42.08
KRG93519 Soybean cytosol, peroxisome, plasma membrane 37.45 42.0
KRH17450 Soybean plasma membrane 37.38 41.92
KRH45417 Soybean plasma membrane 37.23 41.63
KRH39563 Soybean peroxisome 36.09 40.64
KRH74394 Soybean plasma membrane 35.88 40.37
KRH67730 Soybean cytosol, peroxisome, plasma membrane 38.37 40.09
KRH19897 Soybean cytosol, peroxisome, plasma membrane 38.16 39.9
KRH21125 Soybean plasma membrane 35.88 39.89
KRG96023 Soybean cytosol, peroxisome, plasma membrane 38.09 39.88
KRH32507 Soybean cytosol, nucleus, plasma membrane 38.02 39.69
KRH11119 Soybean plasma membrane 35.09 39.45
KRH69152 Soybean cytosol, peroxisome, plasma membrane 35.81 39.16
KRH19486 Soybean cytosol, peroxisome, plasma membrane 35.02 38.54
KRH33644 Soybean cytosol, peroxisome, plasma membrane 35.16 38.46
KRH02481 Soybean plasma membrane 34.24 37.65
KRH02484 Soybean plasma membrane 33.81 37.44
KRH68334 Soybean cytosol, peroxisome, plasma membrane 33.88 37.02
KRH19479 Soybean plasma membrane 33.95 36.64
KRH19480 Soybean plasma membrane 31.38 36.48
KRH02482 Soybean cytosol, peroxisome, plasma membrane 33.59 36.15
KRH53669 Soybean plasma membrane 31.81 35.57
KRH06234 Soybean peroxisome, plastid 32.67 30.23
Protein Annotations
Gene3D:1.20.1560.10EntrezGene:100779000MapMan:24.1.3.1.1Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeEMBL:ACUP02011522ncoils:CoilEnsemblPlantsGene:GLYMA_18G286600GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0042626GO:GO:0055085UniProt:I1N529InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
EnsemblPlants:KRH01590ProteinID:KRH01590ProteinID:KRH01590.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
PFscan:PS50893PFscan:PS50929PANTHER:PTHR24222PANTHER:PTHR24222:SF21SMART:SM00382SUPFAM:SSF52540
SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000233F129SEG:seg::
Description
hypothetical protein
Coordinates
chr18:+:56680605..56690072
Molecular Weight (calculated)
155276.0 Da
IEP (calculated)
6.450
GRAVY (calculated)
0.094
Length
1402 amino acids
Sequence
(BLAST)
0001: MMVSRGLFGW SPPHVQPLTP VSEVSEPPES PSPYLDPGAE TSASQQVEAE EEMEEPEEIE PPPAAVPFSQ LFACADRFDW FLMAIGSVAA AAHGTALVVY
0101: LHYFAKIIHV LRLDPPNGTS QEQFDRFTEL ALTIVYIAAG VFVAGWIEVS CWILTGERQT AVIRSNYVQV LLNQDMSFFD TYGNNGDIVS QVLSDVLLIQ
0201: SALSEKVGNY IHNMATFFSG LVIGLVNCWQ IALITLATGP FIVAAGGISN IFLHRLAENI QDAYAEAASI AEQAVSYIRT LYAFSNETLA KYSYATSLQA
0301: TLRYGILISL VQGLGLGFTY GLAICSCALQ LWVGRFLVIH GKAHGGEIIT ALFAVILSGL GLNQAATNFY SFDQGRIAAY RLFEMISRSS SSVNHDGTSP
0401: DSVLGNIEFR NVYFSYLSRP EIPILSGFYL TVPAKKAVAL VGRNGSGKSS IIPLMERFYD PTLGEVLLDG ENIKNLKLEW LRSQIGLVTQ EPALLSLSIT
0501: DNIAYGRDAT MDQIEEAAKI AHAHTFISSL EKGYDTQVGR ACLALTEEQK IKLSIARAVL LNPSILLLDE VTGGLDFEAE RAVQGALDLL MLGRSTIIIA
0601: RRLSLIKNAD YIAVMEEGQL VEMGTHDELL TLDGLYAELH RCEEAAKLPK RMPVRNYKET SAFQIEKDSS SHSFKEPSSP KMMKSPSLQR VSNVSRPPDG
0701: VFNLLESPQV RSPPPEKMLE NGLALDVADK EPSIRRQDSF EMRLPELPKI DVHSVQRHMS NDSDPESPIS PLLTSDPKSE RSHSQTFSRP HSHSDDVSVI
0801: MRETKGARHR KPPSLQKLAE LSFAEWLYAV LGSIGAAIFG SFNPLLAYVI GLVVTAYYRI DDTHHLEREV DRWCLIIGCM GIVTLVANFL QHFYFGIMGE
0901: KMTERVRRMM FSAMLRNEVG WFDDEENSAD NLSMRLANDA TFVRAAFSNR LSIFIQDSAA VIVGLLIGAL LHWRLALVAF ATLPILSVSA IAQKFWLAGF
1001: SRGIQEMHKK ASLVLEDAVR NIYTVVAFCA GNKVMELYRL QLKKIFKQSF LHGMAIGFAF GFSQFLLFAC NALLLWYTAI CIKRGYMDPP TALKEYMVFS
1101: FATFALVEPF GLAPYILKRR KSLISVFDII DRVPKIDPDD TSALKPPNVY GSLELKNVDF CYPSRPEVLV LSNFSLKVTG GQTVAIVGVS GSGKSTIISL
1201: IERFYDPVAG QVFLDGRDLK EYNLRWLRSH LGLVQQEPII FSTTIRENII YARHNATEAE MKEAARIANA HHFISSLPHG YDTHVGMRGV DLTPGQKQRI
1301: AIARVVLKNA PILLLDEASS AIESESSRVV QEALDTLIMG NKTTILIAHR AAMMRHVDNI VVLNGGRIVE EGSHDTLVAK NGLYVRLMQP HFGKALRQHR
1401: LV
Best Arabidopsis Sequence Match ( AT3G55320.1 )
(BLAST)
0001: MMISRGLFGW SPPHMQPLTP VSEVSEPPES PSPYLDPGAE SGGGTGTAAA LAEADEEMDD QDELEPPPAA VPFSQLFACA DRFDWVLMIV GSVAAAAHGT
0101: ALIVYLHYFA KIVDVLAFSN DSSQQRSEHQ FDRLVQLSLT IVYIAGGVFI SGWIEVSCWI LTGERQTAVI RSKYVQVLLN QDMSFFDTYG NNGDIVSQVL
0201: SDVLLIQSAL SEKVGNYIHN MATFISGLVI GFVNCWEIAL ITLATGPFIV AAGGISNIFL HRLAENIQDA YAEAAGIAEQ AISYIRTLYA FTNETLAKYS
0301: YATSLQATLR YGILISLVQG LGLGFTYGLA ICSCALQLWI GRFFVHNGRA NGGEIIAALF AVILSGLGLN QAATNFYSFD QGRIAAYRLF EMITRSSSVA
0401: NQEGAVLASV QGNIEFRNVY FSYLSRPEIP ILSGFYLTVP AKKAVALVGR NGSGKSSIIP LMERFYDPTL GEVLLDGENI KNLKLEWLRS QIGLVTQEPA
0501: LLSLSIRENI AYGRDATLDQ IEEAAKNAHA HTFISSLEKG YETQVGRAGL AMTEEQKIKL SIARAVLLNP TILLLDEVTG GLDFEAERIV QEALDLLMLG
0601: RSTIIIARRL SLIKNADYIA VMEEGQLVEM GTHDELINLG GLYAELLKCE EATKLPRRMP VRNYKESAVF EVERDSSAGC GVQEPSSPKM IKSPSLQRGS
0701: GVFRPQELCF DTEESPKAHS PASEKTGEDG MSLDCADKEP TIKRQDSFEM RLPHLPKVDV QCPQQKSNGS EPESPVSPLL TSDPKNERSH SQTFSRPLSS
0801: PDDTKANGKA SKDAQHKESP SFWRLAQLSF PEWLYAVLGS LGAAIFGSFN PLLAYVIALV VTEYYKSKGG HLREEVDKWC LIIACMGIVT VVANFLQHFY
0901: FGIMGEKMTE RVRRMMFSAM LRNEVGWFDD EENSPDTLSM RLANDATFVR AAFSNRLSIF IQDSFAVIVA LLIGLLLGWR LALVALATLP ILTLSAIAQK
1001: LWLAGFSKGI QEMHRKASLV LEDAVRNIYT VVAFCAGNKV MELYRMQLQR ILRQSYLHGM AIGFAFGFSQ FLLFACNALL LWCTALSVNR GYMKLSTAIT
1101: EYMVFSFATF ALVEPFGLAP YILKRRKSLI SVFEIVDRVP TIEPDDNSAL KPPNVYGSIE LKNVDFCYPT RPEILVLSNF SLKISGGQTV AVVGVSGSGK
1201: STIISLVERY YDPVAGQVLL DGRDLKLYNL RWLRSHMGLV QQEPIIFSTT IRENIIYARH NASEAEMKEA ARIANAHHFI SSLPHGYDTH IGMRGVELTP
1301: GQKQRIAIAR VVLKNAPIIL IDEASSSIES ESSRVVQEAL DTLIMGNKTT ILIAHRAAMM RHVDNIVVLN GGRIVEEGTH DSLAAKNGLY VRLMQPHFGK
1401: GLRQHRLI
Arabidopsis Description
ABCB20ABC transporter B family member 20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M3B9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.