Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g010310.2.1 | Tomato | plasma membrane | 85.59 | 7.39 |
| VIT_13s0019g00310.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 86.49 | 7.38 |
| VIT_06s0004g04100.t01 | Wine grape | cytosol | 88.29 | 6.98 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 88.29 | 6.96 |
| KRG92957 | Soybean | nucleus | 87.39 | 6.93 |
| AT3G55320.1 | Thale cress | cytosol, peroxisome, plasma membrane | 87.39 | 6.89 |
| CDY24958 | Canola | mitochondrion, plasma membrane, plastid | 86.49 | 6.88 |
| CDY65312 | Canola | cytosol | 86.49 | 6.86 |
| KRH36206 | Soybean | cytosol, golgi, plastid | 86.49 | 6.86 |
| CDY20443 | Canola | cytosol, mitochondrion, plasma membrane | 86.49 | 6.85 |
| CDY07647 | Canola | cytosol | 86.49 | 6.85 |
| KRH01590 | Soybean | mitochondrion | 86.49 | 6.85 |
| Bra000136.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 86.49 | 6.84 |
| CDY53591 | Canola | cytosol, mitochondrion, plasma membrane | 86.49 | 6.82 |
| Bra005036.1-P | Field mustard | mitochondrion | 86.49 | 6.82 |
| KRH70512 | Soybean | extracellular | 85.59 | 6.78 |
| Bra014756.1-P | Field mustard | cytosol, golgi, peroxisome | 84.68 | 6.71 |
| CDX76106 | Canola | cytosol, golgi, peroxisome | 83.78 | 6.64 |
| AT2G39480.1 | Thale cress | cytosol, mitochondrion, plasma membrane | 82.88 | 6.54 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 45.95 | 5.33 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 43.24 | 4.4 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 46.85 | 4.09 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 42.34 | 4.08 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 45.95 | 4.03 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 44.14 | 3.9 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 44.14 | 3.9 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 42.34 | 3.82 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 43.24 | 3.79 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 43.24 | 3.79 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 43.24 | 3.77 |
| HORVU6Hr1G067200.1 | Barley | plastid | 45.95 | 3.76 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 43.24 | 3.74 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 46.85 | 3.69 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 41.44 | 3.65 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 41.44 | 3.59 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 40.54 | 3.55 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 2.7 | 0.22 |
| HORVU3Hr1G117180.10 | Barley | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G117250.1 | EnsemblPlantsGene:HORVU3Hr1G117250 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 | InterPro:ABC_transporter-like | InterPro:IPR003439 |
| InterPro:P-loop_NTPase | PANTHER:PTHR24222 | PANTHER:PTHR24222:SF27 | PFAM:PF00005 | SEG:seg | SUPFAM:SSF52540 |
| UniParc:UPI000B48778C | UniProt:A0A287MUE0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:697676973..697678056
Molecular Weight (calculated)
12298.3 Da
IEP (calculated)
10.700
GRAVY (calculated)
0.049
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: LTPGQKQRIA IARVVLKNAP IVLLDEASSA IESESSRVVQ EALDTLIMGN KTTILIAHRA AMMKHVDNIV VLNGGKIVEQ GTHDSLVQMN GLYIKLMQPH
101: FTKGFRQRRL I
101: FTKGFRQRRL I
0001: MMISRGLFGW SPPHIQPLTP VSEVSEPPES PSPYLDPGAE HGGTGTAAQA DDEEEMEEPE EMEPPPAAVP FSQLFACADR FDWVLMVFGS VAAAAHGTAL
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
0101: IVYLHYFAKI VQVLAFPTDS DHLISDDQFN RLLELSLTIV YIAGGVFISG WIEVSCWILT GERQTAVIRS KYVQVLLNQD MSFFDTYGNN GDIVSQVLSD
0201: VLLIQSALSE KVGNYIHNMA TFISGLIIGF VNCWEIALIT LATGPFIVAA GGISNIFLHR LAENIQDAYA EAASIAEQAV SYVRTLYAFT NETLAKYSYA
0301: TSLQATLRYG ILISLVQGLG LGFTYGLAIC SCAMQLWIGR FFVIHHRANG GEIITALFAV ILSGLGLNQA ATNFYSFDQG RIAAYRLFEM ISRSSSGTNQ
0401: EGIILSAVQG NIEFRNVYFS YLSRPEIPIL SGFYLTVPAK KAVALVGRNG SGKSSIIPLM ERFYDPTLGE VLLDGENIKN LKLEWLRSQI GLVTQEPALL
0501: SLSIRENIAY GRDATLDQIE EAAKKAHAHT FISSLEKGYE TQVGKTGLTL TEEQKIKLSI ARAVLLDPTI LLLDEVTGGL DFEAERVVQE ALDLLMLGRS
0601: TIIIARRLSL IRNADYIAVM EEGQLLEMGT HDELINLGNL YAELLKCEEA TKLPRRMPVR NYNDSAAFQA ERDSSAGRGF QEPSSPKMAK SPSLQRGHNV
0701: FRSQELCFNS EESPNDHSPA PEKLGENGSS LDVGEKEPTI KRQDSFEMRL PELPKIDIQC PQRQKSNGSD PESPISPLLI SDPQNERSHS QTFSRPLGHS
0801: DDTSASVKVA KDGQHKEPPS FWRLAQLSFP EWLYAVLGSI GAAIFGSFNP LLAYVIALVV TTYYTSKGSH LREEVDKWCL IIACMGIVTV VANFLQHFYF
0901: GIMGEKMTER VRRMMFSAML RNEVGWYDEE ENSPDTLSMR LANDATFVRA AFSNRLSIFI QDSFAVIVAI LIGLLLGWRL ALVALATLPV LTLSAIAQKL
1001: WLAGFSKGIQ EMHRKASLVL EDAVRNIYTV VAFCAGNKVM ELYRLQLQRI LRQSFFHGMA IGFAFGFSQF LLFACNALLL WYTALSVDRR YMKLSTALTE
1101: YMVFSFATFA LVEPFGLAPY ILKRRRSLAS VFEIIDRVPT IEPDDTSALS PPNVYGSIEL KNIDFCYPTR PEVLVLSNFS LKVNGGQTVA VVGVSGSGKS
1201: TIISLIERYY DPVAGQVLLD GRDLKSYNLR WLRSHMGLIQ QEPIIFSTTI RENIIYARHN ASEAEMKEAA RIANAHHFIS SLPHGYDTHI GMRGVELTQG
1301: QKQRIAIARV VLKNAPILLI DEASSSIESE SSRVVQEALD TLIMGNKTTI LIAHRVAMMR HVDNIVVLNG GKIVEEGTHD CLAGKNGLYV RLMQPHFGKN
1401: LRRHQLI
Arabidopsis Description
ABCB6ABC transporter B family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPT1]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
SUBAcon: [mitochondrion,plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.