Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G257900.1 | Wheat | peroxisome | 95.6 | 96.43 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 79.26 | 96.28 |
| TraesCS3A01G258000.1 | Wheat | mitochondrion | 96.7 | 92.84 |
| Os01t0695800-01 | Rice | plasma membrane | 18.7 | 90.84 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 89.4 | 90.17 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 89.4 | 89.96 |
| Zm00001d011644_P002 | Maize | plasma membrane | 79.65 | 78.91 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 67.64 | 68.61 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 67.64 | 68.61 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 67.79 | 67.42 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 63.47 | 63.87 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 54.99 | 60.82 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 58.76 | 60.76 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 46.27 | 60.41 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.76 | 59.98 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 57.82 | 59.4 |
| KRH21125 | Soybean | plasma membrane | 58.52 | 59.08 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.6 | 59.07 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.52 | 59.03 |
| KRH11119 | Soybean | plasma membrane | 57.42 | 58.62 |
| AT4G18050.2 | Thale cress | plasma membrane | 57.11 | 58.35 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 57.5 | 57.87 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.02 | 57.2 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 56.72 | 57.17 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.12 | 56.33 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 56.32 | 55.88 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 54.91 | 55.52 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 54.44 | 55.04 |
| AT5G46540.1 | Thale cress | golgi | 53.89 | 54.97 |
| Bra017539.1-P | Field mustard | plasma membrane | 42.18 | 52.09 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 32.76 | 43.62 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 3.77 | 43.24 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 42.81 | 42.91 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 42.26 | 42.46 |
| HORVU6Hr1G067200.1 | Barley | plastid | 42.66 | 40.07 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 37.71 | 38.99 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 31.81 | 37.12 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 36.29 | 36.44 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 39.51 | 35.65 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 37.71 | 34.07 |
| HORVU3Hr1G117180.10 | Barley | plastid | 34.72 | 31.02 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 33.23 | 30.41 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287LE58 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G065320 | EnsemblPlants:HORVU3Hr1G065320.47 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000B48674A | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:497826007..497832815
Molecular Weight (calculated)
137707.0 Da
IEP (calculated)
8.216
GRAVY (calculated)
0.093
Length
1273 amino acids
Sequence
(BLAST)
(BLAST)
0001: AGLISRTSSS QEMGATAEGG SGEGATHGGK DGRPEKKVPL LGIFRYADRL DVLLMVVGSL GAVGNGVSEP LISVLFGDVI NSFGQSTTST VLRAVTKVVL
0101: NFIYLGIGTA VASFLQVACW TMAGERQSAR IRSLYLKSVL RQDIAFFDTE MTTGEAVSRM SSDTVIIQDA LGEKAGKLVQ LASAFFGGFI IAFTKGWLLT
0201: LVMLTSLPLI AIAGAVSSQL LTRVSSKRLT SYSDAADTVE QTIGSIRTVA SFNGEKKAIE MYNKFIKNAY KTVVEEGLVN GFGMGSVFCI LFSSYGLAFW
0301: YGGKLIIDKG YTGGKILTTL LAVLTGATSL GNATPSISAI AEGQSAAYRL FETIERKPEI DSDDTSGMIM ENIKGDVELK DVYFRYPARP GQLILDGLSL
0401: QVANGTTMAI VGESGSGKST VISLVERFYD PQAGEVLIDG VNIKNLNLDW IRGKIGLVSQ EPLLFMTSIK DNITYGKEEA TLEEIKRAAE LANAANFIDK
0501: LPNGYDTLVG QRGTLLSGGQ KQRIAIARAI LKDPKILLLD EATSALDVES ERIVQEALNR IMVQRTTLVV AHRLSTVRNV DCITVVHQGK IVEQGPHHTL
0601: VKDPNGAYSQ LIRLQETRGD ERHKIKDSGV PNSLSKSTSL SNRRSMTKDS FGNSNRYSFK NPLGLSVELH EDEITGEQNK DDLSNGKTLQ KASIGRLFYL
0701: NKPEVPYLLL GAIAASVHGV IFPLFGILMS GVIKSFYEPP DKLRKDSSFW ALISVVLGFA SFIAIPAQYL LFGIAGGKLI ERVRTLSFQN IVHQEVAWFD
0801: NPSNSSGALG TRLSVDALNV RRLVGDNLGL IVQSTAALIT GFVIAFTADW RLALIITCVI PLVGAQGYAQ VRFLKGFSEE AKEMYEDASQ VATDAVGSIR
0901: TIASFCAEKR VVTTYNKKCE ALRKQGIRSG IVGGLGFGFS FLMLYLTYAL CFYVGAQFVR QGKITFADVF KVFFALVLAT IGVSQASALA SNATKARDSA
1001: ISVFSILDRK SKIDTSNDEG LILENVTGDI HFSNVSFKYP SRPDVQIFSD FTLHIPSRKT IALVGESGSG KSTIIALLER FYDPDSGSIS VDGVEIKSLR
1101: ISWLRDQMGL VGQEPVLFND TIRANITYGK HGEVTEEEVT AVAKAANAHE FISSLPQGYD TLVGEKGVQL SGGQKQRVAI ARAIIKDPKI LLLDEATSAL
1201: DAESERIVQD ALDRVMVSRT TIVVAHRLST IKGADMIAVL KEGKIAEKGK HEALMRIKDG VYASLVELRS NSE
0101: NFIYLGIGTA VASFLQVACW TMAGERQSAR IRSLYLKSVL RQDIAFFDTE MTTGEAVSRM SSDTVIIQDA LGEKAGKLVQ LASAFFGGFI IAFTKGWLLT
0201: LVMLTSLPLI AIAGAVSSQL LTRVSSKRLT SYSDAADTVE QTIGSIRTVA SFNGEKKAIE MYNKFIKNAY KTVVEEGLVN GFGMGSVFCI LFSSYGLAFW
0301: YGGKLIIDKG YTGGKILTTL LAVLTGATSL GNATPSISAI AEGQSAAYRL FETIERKPEI DSDDTSGMIM ENIKGDVELK DVYFRYPARP GQLILDGLSL
0401: QVANGTTMAI VGESGSGKST VISLVERFYD PQAGEVLIDG VNIKNLNLDW IRGKIGLVSQ EPLLFMTSIK DNITYGKEEA TLEEIKRAAE LANAANFIDK
0501: LPNGYDTLVG QRGTLLSGGQ KQRIAIARAI LKDPKILLLD EATSALDVES ERIVQEALNR IMVQRTTLVV AHRLSTVRNV DCITVVHQGK IVEQGPHHTL
0601: VKDPNGAYSQ LIRLQETRGD ERHKIKDSGV PNSLSKSTSL SNRRSMTKDS FGNSNRYSFK NPLGLSVELH EDEITGEQNK DDLSNGKTLQ KASIGRLFYL
0701: NKPEVPYLLL GAIAASVHGV IFPLFGILMS GVIKSFYEPP DKLRKDSSFW ALISVVLGFA SFIAIPAQYL LFGIAGGKLI ERVRTLSFQN IVHQEVAWFD
0801: NPSNSSGALG TRLSVDALNV RRLVGDNLGL IVQSTAALIT GFVIAFTADW RLALIITCVI PLVGAQGYAQ VRFLKGFSEE AKEMYEDASQ VATDAVGSIR
0901: TIASFCAEKR VVTTYNKKCE ALRKQGIRSG IVGGLGFGFS FLMLYLTYAL CFYVGAQFVR QGKITFADVF KVFFALVLAT IGVSQASALA SNATKARDSA
1001: ISVFSILDRK SKIDTSNDEG LILENVTGDI HFSNVSFKYP SRPDVQIFSD FTLHIPSRKT IALVGESGSG KSTIIALLER FYDPDSGSIS VDGVEIKSLR
1101: ISWLRDQMGL VGQEPVLFND TIRANITYGK HGEVTEEEVT AVAKAANAHE FISSLPQGYD TLVGEKGVQL SGGQKQRVAI ARAIIKDPKI LLLDEATSAL
1201: DAESERIVQD ALDRVMVSRT TIVVAHRLST IKGADMIAVL KEGKIAEKGK HEALMRIKDG VYASLVELRS NSE
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.