Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 96.15 | 83.65 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 94.96 | 82.55 |
| OQU79903 | Sorghum | peroxisome | 77.64 | 66.85 |
| Zm00001d049565_P001 | Maize | peroxisome | 76.99 | 66.46 |
| HORVU7Hr1G071870.33 | Barley | peroxisome | 67.64 | 58.2 |
| Solyc06g072960.1.1 | Tomato | peroxisome | 52.8 | 56.03 |
| KRH53669 | Soybean | plasma membrane | 59.12 | 51.44 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 55.27 | 50.76 |
| PGSC0003DMT400069516 | Potato | peroxisome | 53.25 | 48.99 |
| HORVU3Hr1G117250.1 | Barley | mitochondrion | 4.4 | 43.24 |
| HORVU6Hr1G067170.3 | Barley | endoplasmic reticulum, vacuole | 34.92 | 39.85 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 37.67 | 35.71 |
| HORVU2Hr1G115180.1 | Barley | cytosol, peroxisome, plasma membrane | 39.87 | 34.25 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 39.41 | 33.94 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 38.77 | 33.71 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 38.77 | 33.71 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 38.22 | 32.5 |
| HORVU3Hr1G065280.1 | Barley | plasma membrane | 37.58 | 32.49 |
| HORVU3Hr1G065240.14 | Barley | cytosol | 37.49 | 31.95 |
| HORVU1Hr1G078450.24 | Barley | plasma membrane | 36.94 | 31.86 |
| HORVU3Hr1G065320.47 | Barley | plasma membrane | 37.12 | 31.81 |
| HORVU6Hr1G067200.1 | Barley | plastid | 39.51 | 31.81 |
| HORVU3Hr1G068650.8 | Barley | peroxisome, plasma membrane | 35.66 | 31.6 |
| HORVU6Hr1G021320.43 | Barley | peroxisome | 36.39 | 31.38 |
| HORVU7Hr1G063020.3 | Barley | cytosol | 39.69 | 30.69 |
| HORVU4Hr1G058580.2 | Barley | cytosol, plasma membrane, plastid | 34.56 | 26.76 |
| HORVU3Hr1G117180.10 | Barley | plastid | 30.98 | 23.72 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 30.16 | 23.65 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287E2C9 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:HORVU0Hr1G015570 | EnsemblPlants:HORVU0Hr1G015570.6 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF218 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000B46D4CA |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:84401887..84406977
Molecular Weight (calculated)
118616.0 Da
IEP (calculated)
7.541
GRAVY (calculated)
0.166
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: LLIFPQMGHF ISNFSTFLVA VIVAFVCCWE VGTLSLLVVP MLLVVGATYA KTMIGMSMTR TAFVSETTTV VEQTLSHIKT VFSFVGENSA MKSFVKCMDK
0101: QYKLSKKEAF IKGLGLGMLQ IATFCSYSLT IYVGAVAVTR RSAKAGETIA AVINILSGAI YLSNAAPDLQ IFSQAKAAGK EVFKVIKRNP VISSESNGRI
0201: LEKVIGDIEI REVHFTYPSR EDNPILQGFS LAVPAGKIMA LVGSSGCGKS TVISLVQRFY DAMSGDILID GKNIKELDLK SLRRNIGSVS QEPSLFSGTI
0301: SDNLRIGKMD ATDEEVIEAA KTANVHTFIS KLPNQYSTEV GERGVQLSGG QKQRIAIARA ILKNPPILLL DEATSALDSE SEKLVQDALD RAMQGRTVIL
0401: IAHRISTIIN ADKIVVVENG RVVHSGTHKE LLEKSAFYSS VCNMQNLEKE SGKTGESRIT EQDEEEQDNK LSFAADDEEK RTELTSKQPK QGIRKRTSAF
0501: YRIFLGTFKV VPGKVLLGST AAAISGISRP IFAFFIITVA MAYLETDAER IVGKYSVILF LVGFLTFFSN IFQHYIYGLV GERAMNSLRE ALFSVALRSE
0601: VGWFEEPGNS VGFLTSRVVS DTSMIKTVIS DRMSVIVQCI SSILIATVLS TAVNWRMALA VYAMMPCHLI AGLVQVRSAK GFATDISTSH QKLISLTSEA
0701: VSNIRTVASF VQEEEVLRKA DLALQEPMQT IRMESIKYGA LQGVALCLWH MTHAIQLSCS IALIGKGLAT FENCVRSYQT FALTVPSITE LWSLIPMVMS
0801: ALAVLDPALD ILDRETQMVP DVPKASHDEQ DRIVGGIAFE DVSFSYPSRA KVTILDGFSL AIEPGQRVAL VGPSGAGKST VFALLLRFYE PSQGRVLVDS
0901: KDIRDYNLKW LRRQIGLVQQ EPILFNLSIR ENISYGNEGA SEAEIVQAAT EANIHEFISG LSAGYGTVVG DKGSQLSGGQ KQRIAIARTI LKKPAILLLD
1001: EATSALDGES ERVVMSSLAA KGWGNNGGEP SPSMITSITI AHRLSTVAGA DMIVVMEKGA VVEMGCHETL VSASNGVYSR MYRVQVKGAK D
0101: QYKLSKKEAF IKGLGLGMLQ IATFCSYSLT IYVGAVAVTR RSAKAGETIA AVINILSGAI YLSNAAPDLQ IFSQAKAAGK EVFKVIKRNP VISSESNGRI
0201: LEKVIGDIEI REVHFTYPSR EDNPILQGFS LAVPAGKIMA LVGSSGCGKS TVISLVQRFY DAMSGDILID GKNIKELDLK SLRRNIGSVS QEPSLFSGTI
0301: SDNLRIGKMD ATDEEVIEAA KTANVHTFIS KLPNQYSTEV GERGVQLSGG QKQRIAIARA ILKNPPILLL DEATSALDSE SEKLVQDALD RAMQGRTVIL
0401: IAHRISTIIN ADKIVVVENG RVVHSGTHKE LLEKSAFYSS VCNMQNLEKE SGKTGESRIT EQDEEEQDNK LSFAADDEEK RTELTSKQPK QGIRKRTSAF
0501: YRIFLGTFKV VPGKVLLGST AAAISGISRP IFAFFIITVA MAYLETDAER IVGKYSVILF LVGFLTFFSN IFQHYIYGLV GERAMNSLRE ALFSVALRSE
0601: VGWFEEPGNS VGFLTSRVVS DTSMIKTVIS DRMSVIVQCI SSILIATVLS TAVNWRMALA VYAMMPCHLI AGLVQVRSAK GFATDISTSH QKLISLTSEA
0701: VSNIRTVASF VQEEEVLRKA DLALQEPMQT IRMESIKYGA LQGVALCLWH MTHAIQLSCS IALIGKGLAT FENCVRSYQT FALTVPSITE LWSLIPMVMS
0801: ALAVLDPALD ILDRETQMVP DVPKASHDEQ DRIVGGIAFE DVSFSYPSRA KVTILDGFSL AIEPGQRVAL VGPSGAGKST VFALLLRFYE PSQGRVLVDS
0901: KDIRDYNLKW LRRQIGLVQQ EPILFNLSIR ENISYGNEGA SEAEIVQAAT EANIHEFISG LSAGYGTVVG DKGSQLSGGQ KQRIAIARTI LKKPAILLLD
1001: EATSALDGES ERVVMSSLAA KGWGNNGGEP SPSMITSITI AHRLSTVAGA DMIVVMEKGA VVEMGCHETL VSASNGVYSR MYRVQVKGAK D
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.