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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • peroxisome 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane
MultiLoc:peroxisome
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G099000.1 Wheat cytosol, peroxisome, plasma membrane 97.19 97.8
TraesCS1D01G082900.2 Wheat cytosol, peroxisome, plasma membrane 97.04 97.57
TraesCS1A01G081300.1 Wheat unclear 96.8 97.34
Os05t0137200-01 Rice plasma membrane 26.81 87.53
OQU77362 Sorghum mitochondrion, plasma membrane 77.63 86.31
GSMUA_Achr8P29860_001 Banana endoplasmic reticulum 64.22 74.5
PGSC0003DMT400011703 Potato cytosol 9.59 73.65
GSMUA_Achr1P25070_001 Banana plasma membrane 49.96 70.75
KRH69152 Soybean cytosol, peroxisome, plasma membrane 67.11 67.16
KRH33644 Soybean cytosol, peroxisome, plasma membrane 66.64 66.69
VIT_07s0005g02660.t01 Wine grape cytosol, peroxisome, plasma membrane 67.42 66.69
CDX67881 Canola cytosol 62.28 66.53
CDY25095 Canola cytosol 62.51 66.5
KRH19486 Soybean cytosol, peroxisome, plasma membrane 65.94 66.41
PGSC0003DMT400018820 Potato cytosol, peroxisome, plasma membrane 66.41 66.2
CDY48003 Canola cytosol 61.18 65.86
CDY27510 Canola cytosol 61.5 65.8
CDX80072 Canola cytosol 61.34 65.69
KRH02481 Soybean plasma membrane 65.16 65.57
VIT_05s0020g00890.t01 Wine grape cytosol, peroxisome, plasma membrane 65.63 65.07
KRH68334 Soybean cytosol, peroxisome, plasma membrane 65.0 65.0
CDY51307 Canola cytosol, peroxisome, plasma membrane 63.68 64.64
CDY37776 Canola cytosol, peroxisome, plasma membrane 62.59 64.6
Bra004484.1-P Field mustard cytosol 64.54 64.49
Bra003490.1-P Field mustard cytosol, nucleus, plasma membrane 64.93 64.47
CDY15432 Canola cytosol 61.5 64.46
Solyc06g009280.1.1 Tomato cytosol, peroxisome, plasma membrane 64.69 64.39
AT2G47000.1 Thale cress cytosol, peroxisome, plasma membrane 64.46 64.31
AT3G62150.2 Thale cress cytosol, nucleus, plasma membrane 64.93 64.27
CDX89963 Canola cytosol, nucleus, plasma membrane 63.29 64.24
Bra030503.1-P Field mustard cytosol, peroxisome, plasma membrane 63.6 63.95
Bra040475.1-P Field mustard cytosol 64.07 63.87
CDY15249 Canola cytosol, peroxisome, plasma membrane 63.13 63.78
AT1G02520.1 Thale cress cytosol, peroxisome, plasma membrane 63.45 63.69
Bra033331.1-P Field mustard cytosol, nucleus, plasma membrane 62.35 63.19
PGSC0003DMT400018812 Potato cytosol, peroxisome, plasma membrane 59.63 63.12
CDY24379 Canola plasma membrane 57.21 62.79
AT4G01830.1 Thale cress golgi, plasma membrane, vacuole 60.17 62.76
AT4G01820.1 Thale cress peroxisome, plasma membrane, vacuole 59.78 62.41
CDY20842 Canola endoplasmic reticulum, golgi, plasma membrane 56.66 62.03
Bra002094.1-P Field mustard cytosol, peroxisome, plasma membrane 59.31 61.82
KRH02482 Soybean cytosol, peroxisome, plasma membrane 61.96 61.01
Solyc06g009290.2.1 Tomato nucleus 66.1 60.57
Bra003445.1-P Field mustard peroxisome 59.16 60.53
CDY58790 Canola peroxisome 57.68 60.11
KRH19480 Soybean plasma membrane 55.81 59.37
CDY51560 Canola peroxisome 57.76 59.23
KRH02484 Soybean plasma membrane 57.99 58.77
HORVU3Hr1G021600.2 Barley peroxisome, plasma membrane, vacuole 52.46 58.47
Solyc12g098840.1.1 Tomato peroxisome 58.22 58.36
PGSC0003DMT400011930 Potato peroxisome 58.15 57.96
KRH19479 Soybean plasma membrane 57.76 57.04
HORVU2Hr1G001530.10 Barley plasma membrane 55.65 56.89
HORVU2Hr1G001630.2 Barley plasma membrane 55.65 56.89
HORVU3Hr1G065320.47 Barley plasma membrane 55.88 56.32
HORVU3Hr1G065280.1 Barley plasma membrane 55.34 56.26
Solyc11g067300.1.1 Tomato plasma membrane 54.64 55.63
HORVU1Hr1G078450.24 Barley plasma membrane 54.25 55.02
HORVU6Hr1G021320.43 Barley peroxisome 54.17 54.94
HORVU3Hr1G065240.14 Barley cytosol 53.55 53.67
PGSC0003DMT400019085 Potato plasma membrane 52.53 52.09
HORVU2Hr1G115180.1 Barley cytosol, peroxisome, plasma membrane 43.49 43.94
HORVU6Hr1G067170.3 Barley endoplasmic reticulum, vacuole 32.74 43.93
HORVU3Hr1G117250.1 Barley mitochondrion 3.74 43.24
HORVU2Hr1G080200.1 Barley plasma membrane 42.48 43.02
HORVU6Hr1G067200.1 Barley plastid 42.32 40.07
HORVU3Hr1G068650.8 Barley peroxisome, plasma membrane 36.94 38.51
HORVU0Hr1G015570.6 Barley endoplasmic reticulum, plasma membrane 32.5 38.22
HORVU7Hr1G063020.3 Barley cytosol 41.85 38.06
HORVU7Hr1G071870.33 Barley peroxisome 36.79 37.22
HORVU4Hr1G058580.2 Barley cytosol, plasma membrane, plastid 38.82 35.34
HORVU3Hr1G117180.10 Barley plastid 35.0 31.51
HORVU4Hr1G077060.1 Barley mitochondrion, peroxisome, plastid 32.74 30.19
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.1Gene3D:3.40.50.300UniProt:A0A287ERQ6InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
EnsemblPlantsGene:HORVU1Hr1G017460EnsemblPlants:HORVU1Hr1G017460.3InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221
PANTHER:PTHR24221:SF292SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000B47B39B
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:+:59279768..59285505
Molecular Weight (calculated)
137513.0 Da
IEP (calculated)
7.477
GRAVY (calculated)
0.143
Length
1283 amino acids
Sequence
(BLAST)
0001: MSESSRAFNV DGGGQPADGA RGGRKGGGGG SGSGSVPFHR LFAFADSADA ALMLVGAVGA VANGAALPLM TVLFGGLVDA FGGAAAGSGD VLARVSQVSL
0101: EFVYLAIASA VASFAQVTCW MITGERQAAR IRNMYLRTIL RQEIAFFDMY TSTGEVVGRM SGDTVLIQDA MGEKVGKFIQ LMVTFFGGFA VAFAQGWLLT
0201: LVMVATIPPL VLSGAVMSNV VARMASLGQA AYAEAAVVVE QTVGSIRTVR FHSTIQTQVA SFTGEKKAVE KYNNSLKCAY SSGVREGLVA AIGMGTVMML
0301: LFCGYSLGVW YGAKLILEKG YTGAQVMNVI FAVLTGSLAL GQASPSMKAF AGGQAAAYKM FETINREPEI DAYSTEGRML DDIQGDIEFR DVHFSYPTRP
0401: NEQIFRGFSL SIQSAKTVAL VGQSGSGKST VISLIERFYD PQLGEVLIDG VNIKELQLKW IRSKIGLVSQ EPALFAASIR DNIAYGKDNA TDQEIRAAAE
0501: LANASKFIDK LPQGFTTSVG EHGTQLSGGQ KQRIAIARAI LKDPRILLLD EATSALDTES ERIVQEALDR VMTNRTTVIV AHRLTTVRNA DTIAVICRGS
0601: IVEKGPHHDL LRDPEGAYSQ LIRLQETSRA SEGASNQNKS GRKSDTGIWL GKQSLANQSS SQRSSRDNSS HHSFSVPFGI PHEIDVQVGC SKNITDEIQQ
0701: EVPLSRLASL NKPEVPVLIL GSVASAISGV IFPIFAILLS NVIKAFYEPP QMLKKDAAFW SSMFLIFGAV YFLSLPVGSY FFSVAGCKLI RRIRLMTFEK
0801: VVNMEIGWFD DPHNSSGSIG SRLSSDAAKV RGLVGDTLQL VVQNTSTLVA GLVIAFVSNW ELSLIILALI PLIGLNGWIQ MKFIQGFSAD AKMMYEEASQ
0901: VANDAVSSIR TVASFSAEEK VMDLYNKKCE GPLQTGIRTG IISGIGFGVS FFLLFGVYGA SFYAGARLVE DKKTTFPKVF RVFLALTMAA IGVSHTSTLT
1001: SDSSRARSAV SSIFAIVDRK SMIDPSDDAG VNVEPLRGDI EFRHVRFRYP TRPDIQIFED LCLTIQSGKT VALVGESGSG KSTAISLLQR FYDPDAGHIL
1101: LDGVDIQKFQ VRWLRQQMGL VSQEPALFND TIRANIAYGK EGEATESDIV SAAQLANAHK FISSLHKGYD TVVGERGAQL SGGQKQRVAI ARAVAKDPRI
1201: LLLDEATSAL DAESERAVQD ALDRVAASRT TVVVAHRLST VRGADVIAVV KDGAIVERGT HDALIAVKGG AYASLVALHS AAE
Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)
0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS
Arabidopsis Description
ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.