Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 32.57 | 86.49 |
| PGSC0003DMT400011703 | Potato | cytosol | 32.32 | 76.05 |
| Os01t0695800-01 | Rice | plasma membrane | 47.33 | 70.99 |
| Os05t0548300-01 | Rice | plasma membrane | 64.38 | 43.47 |
| GSMUA_Achr1P25070_001 | Banana | plasma membrane | 78.12 | 33.89 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 88.04 | 29.98 |
| GSMUA_Achr8P29860_001 | Banana | endoplasmic reticulum | 79.39 | 28.21 |
| TraesCS1D01G082900.2 | Wheat | cytosol, peroxisome, plasma membrane | 88.3 | 27.19 |
| TraesCS1A01G081300.1 | Wheat | unclear | 88.04 | 27.12 |
| Os04t0481700-01 | Rice | plasma membrane | 46.06 | 27.01 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 87.53 | 26.98 |
| HORVU1Hr1G017460.3 | Barley | plasma membrane | 87.53 | 26.81 |
| Os02t0189800-00 | Rice | mitochondrion | 47.84 | 25.13 |
| CDY25095 | Canola | cytosol | 75.83 | 24.71 |
| CDX67881 | Canola | cytosol | 75.06 | 24.56 |
| CDY48003 | Canola | cytosol | 74.3 | 24.5 |
| CDY27510 | Canola | cytosol | 74.55 | 24.44 |
| CDX80072 | Canola | cytosol | 74.05 | 24.29 |
| PGSC0003DMT400018812 | Potato | cytosol, peroxisome, plasma membrane | 73.03 | 23.68 |
| CDY15432 | Canola | cytosol | 73.54 | 23.61 |
| VIT_07s0005g02660.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 77.86 | 23.59 |
| PGSC0003DMT400018820 | Potato | cytosol, peroxisome, plasma membrane | 77.1 | 23.54 |
| KRH19486 | Soybean | cytosol, peroxisome, plasma membrane | 76.08 | 23.47 |
| CDY24379 | Canola | plasma membrane | 69.72 | 23.44 |
| CDY37776 | Canola | cytosol, peroxisome, plasma membrane | 74.05 | 23.41 |
| KRH02481 | Soybean | plasma membrane | 75.32 | 23.22 |
| AT3G62150.2 | Thale cress | cytosol, nucleus, plasma membrane | 75.83 | 22.99 |
| VIT_05s0020g00890.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 75.57 | 22.95 |
| AT1G02520.1 | Thale cress | cytosol, peroxisome, plasma membrane | 74.55 | 22.93 |
| Bra003490.1-P | Field mustard | cytosol, nucleus, plasma membrane | 75.32 | 22.91 |
| CDY51307 | Canola | cytosol, peroxisome, plasma membrane | 73.54 | 22.86 |
| Bra030503.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 74.05 | 22.81 |
| CDX89963 | Canola | cytosol, nucleus, plasma membrane | 73.28 | 22.78 |
| AT2G47000.1 | Thale cress | cytosol, peroxisome, plasma membrane | 74.55 | 22.78 |
| KRH33644 | Soybean | cytosol, peroxisome, plasma membrane | 74.3 | 22.78 |
| Bra040475.1-P | Field mustard | cytosol | 74.55 | 22.77 |
| Bra004484.1-P | Field mustard | cytosol | 74.3 | 22.74 |
| KRH69152 | Soybean | cytosol, peroxisome, plasma membrane | 74.05 | 22.7 |
| Bra033331.1-P | Field mustard | cytosol, nucleus, plasma membrane | 73.03 | 22.67 |
| CDY15249 | Canola | cytosol, peroxisome, plasma membrane | 73.03 | 22.6 |
| KRH19480 | Soybean | plasma membrane | 68.96 | 22.47 |
| AT4G01820.1 | Thale cress | peroxisome, plasma membrane, vacuole | 70.23 | 22.46 |
| Solyc06g009280.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 73.54 | 22.42 |
| Bra002094.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.47 | 22.18 |
| KRH68334 | Soybean | cytosol, peroxisome, plasma membrane | 72.26 | 22.14 |
| AT4G01830.1 | Thale cress | golgi, plasma membrane, vacuole | 68.96 | 22.03 |
| Bra003445.1-P | Field mustard | peroxisome | 69.97 | 21.93 |
| CDY20842 | Canola | endoplasmic reticulum, golgi, plasma membrane | 65.39 | 21.93 |
| Solyc06g009290.2.1 | Tomato | nucleus | 76.34 | 21.43 |
| Os01t0534700-00 | Rice | plasma membrane | 60.05 | 21.34 |
| KRH02482 | Soybean | cytosol, peroxisome, plasma membrane | 70.74 | 21.34 |
| KRH02484 | Soybean | plasma membrane | 68.7 | 21.33 |
| Os05t0548500-00 | Rice | plasma membrane | 67.18 | 20.95 |
| CDY58790 | Canola | peroxisome | 64.89 | 20.71 |
| PGSC0003DMT400011930 | Potato | peroxisome | 67.43 | 20.59 |
| Solyc12g098840.1.1 | Tomato | peroxisome | 66.67 | 20.47 |
| KRH19479 | Soybean | plasma membrane | 67.43 | 20.4 |
| CDY51560 | Canola | peroxisome | 64.89 | 20.38 |
| Solyc11g067300.1.1 | Tomato | plasma membrane | 63.1 | 19.68 |
| Os01t0695700-00 | Rice | plasma membrane | 61.83 | 19.18 |
| Os03t0181750-00 | Rice | plasma membrane | 45.29 | 18.45 |
| PGSC0003DMT400019085 | Potato | plasma membrane | 57.0 | 17.31 |
| Os02t0693700-02 | Rice | plasma membrane | 53.18 | 16.53 |
| Os02t0190300-01 | Rice | plasma membrane | 49.11 | 15.5 |
| Os04t0459000-01 | Rice | plasma membrane | 49.11 | 15.33 |
| Os02t0190000-00 | Rice | plasma membrane | 48.09 | 15.21 |
| Os08t0564300-04 | Rice | plasma membrane | 48.85 | 14.29 |
| Os03t0280000-01 | Rice | plasma membrane | 43.77 | 12.19 |
| Os01t0975900-02 | Rice | plasma membrane | 7.38 | 11.51 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 5.85 | 2.75 |
| Os01t0976000-01 | Rice | nucleus | 2.29 | 1.59 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 0.0 | 0.0 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
| Os03t0181675-00 | Rice | cytosol, nucleus, peroxisome, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | ProteinID:AAW56859.1 | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:BAF16498.1 | ProteinID:BAS92162.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os05g0137200 |
| EnsemblPlants:Os05t0137200-01 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF290 | UniProt:Q5KQM4 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI00004BA946 | SEG:seg | : | : |
Description
MULTIDRUG RESISTANCE 3Similar to P-glycoprotein ABCB5. (Os05t0137200-01);Similar to MDR-like ABC transporter. (Os05t0137200-02);Similar to MDR-like ABC transporter. (Os05t0137200-03);Non-protein coding transcript. (Os05t0137200-04)
Coordinates
chr5:+:2169601..2171491
Molecular Weight (calculated)
42438.9 Da
IEP (calculated)
6.522
GRAVY (calculated)
0.060
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MYEEASQVAN DAVSSIRTVA SFSAEEKVMD LYKMKCEGPL RTGIRTAIIS GIGFGVSIFL LFGVYAASFY AGARLVEDRK TTFPNVFRVF LALTMAAIGV
101: SHTSNLTSDS SKAKSAVSSI FAIVDRKSRI DPSDDAGVSL EPLRGDIEFQ HVSFRYPTRP DVQIFEDLCL TIQSGKTVAL VGESGSGKST AISLLQRFYD
201: PDAGHILLDG VDIQKFQLRW LRQQMGLVSQ EPALFNDTIR ANIAYGKEGD ATESDIVSSA QLANAHKFIS SLHQGYETMV GERGAQLSGG QKQRIAIARA
301: IVKDPKILLL DEATSALDAE SERVVQDALD RVMMNRTTVI VAHRLSTIQG ADMIAVVKNG MIIEKGKHDA LIGIKDGAYA SLVALHVSAA AIS
101: SHTSNLTSDS SKAKSAVSSI FAIVDRKSRI DPSDDAGVSL EPLRGDIEFQ HVSFRYPTRP DVQIFEDLCL TIQSGKTVAL VGESGSGKST AISLLQRFYD
201: PDAGHILLDG VDIQKFQLRW LRQQMGLVSQ EPALFNDTIR ANIAYGKEGD ATESDIVSSA QLANAHKFIS SLHQGYETMV GERGAQLSGG QKQRIAIARA
301: IVKDPKILLL DEATSALDAE SERVVQDALD RVMMNRTTVI VAHRLSTIQG ADMIAVVKNG MIIEKGKHDA LIGIKDGAYA SLVALHVSAA AIS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.