Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 7
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 81.35 | 59.74 |
| Os01t0290700-01 | Rice | cytosol, plasma membrane | 9.12 | 59.46 |
| Bra032855.1-P | Field mustard | cytosol | 6.74 | 55.08 |
| TraesCS4A01G006900.1 | Wheat | peroxisome | 81.24 | 52.44 |
| TraesCS4D01G296900.1 | Wheat | peroxisome | 81.45 | 52.4 |
| Zm00001d004442_P001 | Maize | plastid | 81.76 | 52.01 |
| KXG25805 | Sorghum | peroxisome, plastid | 81.04 | 50.52 |
| Os01t0695800-01 | Rice | plasma membrane | 13.58 | 50.0 |
| HORVU4Hr1G077060.1 | Barley | mitochondrion, peroxisome, plastid | 72.02 | 49.96 |
| Os05t0137200-01 | Rice | plasma membrane | 18.45 | 45.29 |
| VIT_09s0002g00750.t01 | Wine grape | peroxisome, plastid | 62.69 | 38.36 |
| PGSC0003DMT400058977 | Potato | plastid | 60.31 | 38.11 |
| KRH06234 | Soybean | peroxisome, plastid | 58.86 | 37.49 |
| Os05t0548300-01 | Rice | plasma membrane | 22.59 | 37.46 |
| Os02t0189800-00 | Rice | mitochondrion | 28.7 | 37.03 |
| Os04t0481700-01 | Rice | plasma membrane | 23.73 | 34.18 |
| Os01t0534700-00 | Rice | plasma membrane | 36.79 | 32.1 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 13.99 | 31.91 |
| Os04t0459000-01 | Rice | plasma membrane | 40.83 | 31.29 |
| Os02t0693700-02 | Rice | plasma membrane | 40.62 | 31.01 |
| Os02t0190300-01 | Rice | plasma membrane | 39.69 | 30.76 |
| Os02t0190000-00 | Rice | plasma membrane | 39.48 | 30.65 |
| Os08t0564300-04 | Rice | plasma membrane | 42.38 | 30.43 |
| Os05t0548500-00 | Rice | plasma membrane | 38.86 | 29.76 |
| Os01t0695700-00 | Rice | plasma membrane | 38.03 | 28.97 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 22.07 | 25.51 |
| Os04t0642000-01 | Rice | cytosol, peroxisome, plasma membrane | 15.44 | 24.35 |
| Os03t0280000-01 | Rice | plasma membrane | 35.23 | 24.1 |
| Os01t0975900-02 | Rice | plasma membrane | 5.8 | 22.22 |
| Os01t0976000-01 | Rice | nucleus | 1.87 | 3.17 |
| Os03t0181675-00 | Rice | cytosol, nucleus, peroxisome, plastid | 0.83 | 1.37 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A0P0VTT5 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:BAS82632.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os03g0181750 |
| EnsemblPlants:Os03t0181750-00 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PIRSF:PIRSF002773 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF292 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000393B558 | SEG:seg | : |
Description
ABC TRANSPORTER B FAMILY MEMBER 12ABC transporter, transmembrane domain domain containing protein. (Os03t0181750-00)
Coordinates
chr3:+:4281418..4284885
Molecular Weight (calculated)
102706.0 Da
IEP (calculated)
8.670
GRAVY (calculated)
0.130
Length
965 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVCVCRGLA LTLSYMAQFA QGTVAAGRVF EVIDRVPEID AYGAGGRALP AVKGRMEFKD VEFAYPSRPD AMVLYNLNLV IPAAKTLALV GVSGGGKSTM
101: FALIERFYDP TRGEREWPLT RTQSTTMARS SVIDDEAFAS VGCAGSITLD GHDLASLNLR WLRSQIGLVG QEPVLFSTSI IENVMMGKEN ATRHDAISAC
201: AMANVHTFVL ALPDGYDTQV GDRGAQLSGG QKQRIALARA IIRDPRILLL DEPTSALDTQ SEAVVQQSID RLAAGRTVVV IAHRLATVRN ADTIAVLDRG
301: AVVESGRHAD LMARRGPYSA LVSLASDSGG ARPDLAGAAA AYTSFTDESG YDVSVSKSRY GFQTIREEEE KKDSQDAKVR VSEIWRLQRR EGPLLILGFL
401: MGIHAGAVFS VFPLLLGQAV EVYFDADTAR MKRQVEYLAM AVVGLGVACI LTMTGQQGLC GWAGARLTMR VRDRLFRAIM RQEPAWFDEE DNAMGVLVTR
501: LARDAVAFRS MFGDRYAVLL MAVGSAGVGL GICFGLDWRL TLVATACTPL TLGASYLNLL INVGARSDDG AYARASGIAA GAVSNVRTVA ALCAQGSVVG
601: TFNRALDGPA AKASRRSQLM GVILGLSQGA MYGAYTATLC AGAHFINNGV STFGDVSKIF LILVLSSFSV GQLAGLAPDT SGAPAAIAGI LTILKRRPAI
701: TGDSTKRRIT IKDGKPIDVE LRKVTFAYPS RPEVTVLSGF SLRVKAGTTV AVVGASGSGK STVVWLVQRF YDPGDGKVVV GGVDARELDL KWLRGECAMV
801: GQEPALFSGS IRDNIGFGNP KASWAEIEEA AKEANIHKFI SALPQGYETQ VGESGVQLSG GQKQRIAIAR AIVKQARILL LDEASSALDL ESERHVQEAL
901: RRASRRATAI TVAHRLSTVR DADRIAVVSA GRVVEFGGHD ALLAGHGDGL YAAMVKAETE AQAFK
101: FALIERFYDP TRGEREWPLT RTQSTTMARS SVIDDEAFAS VGCAGSITLD GHDLASLNLR WLRSQIGLVG QEPVLFSTSI IENVMMGKEN ATRHDAISAC
201: AMANVHTFVL ALPDGYDTQV GDRGAQLSGG QKQRIALARA IIRDPRILLL DEPTSALDTQ SEAVVQQSID RLAAGRTVVV IAHRLATVRN ADTIAVLDRG
301: AVVESGRHAD LMARRGPYSA LVSLASDSGG ARPDLAGAAA AYTSFTDESG YDVSVSKSRY GFQTIREEEE KKDSQDAKVR VSEIWRLQRR EGPLLILGFL
401: MGIHAGAVFS VFPLLLGQAV EVYFDADTAR MKRQVEYLAM AVVGLGVACI LTMTGQQGLC GWAGARLTMR VRDRLFRAIM RQEPAWFDEE DNAMGVLVTR
501: LARDAVAFRS MFGDRYAVLL MAVGSAGVGL GICFGLDWRL TLVATACTPL TLGASYLNLL INVGARSDDG AYARASGIAA GAVSNVRTVA ALCAQGSVVG
601: TFNRALDGPA AKASRRSQLM GVILGLSQGA MYGAYTATLC AGAHFINNGV STFGDVSKIF LILVLSSFSV GQLAGLAPDT SGAPAAIAGI LTILKRRPAI
701: TGDSTKRRIT IKDGKPIDVE LRKVTFAYPS RPEVTVLSGF SLRVKAGTTV AVVGASGSGK STVVWLVQRF YDPGDGKVVV GGVDARELDL KWLRGECAMV
801: GQEPALFSGS IRDNIGFGNP KASWAEIEEA AKEANIHKFI SALPQGYETQ VGESGVQLSG GQKQRIAIAR AIVKQARILL LDEASSALDL ESERHVQEAL
901: RRASRRATAI TVAHRLSTVR DADRIAVVSA GRVVEFGGHD ALLAGHGDGL YAAMVKAETE AQAFK
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.