Factsheet for TraesCS4B01G298100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

mitochondrion 4
peroxisome 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G006900.1	Wheat	peroxisome	98.86	86.89
TraesCS4D01G296900.1	Wheat	peroxisome	99.09	86.8
HORVU4Hr1G077060.1	Barley	mitochondrion, peroxisome, plastid	89.95	84.97
Os03t0181750-00	Rice	plasma membrane	59.74	81.35
Zm00001d004442_P001	Maize	plastid	82.34	71.33
KXG25805	Sorghum	peroxisome, plastid	82.95	70.41
Bra032855.1-P	Field mustard	cytosol	5.33	59.32
PGSC0003DMT400058977	Potato	plastid	61.49	52.91
VIT_09s0002g00750.t01	Wine grape	peroxisome, plastid	63.09	52.57
TraesCS6B01G145800.1	Wheat	cytosol	10.05	52.17
KRH06234	Soybean	peroxisome, plastid	60.05	52.08
Os03t0181675-00	Rice	cytosol, nucleus, peroxisome, plastid	22.83	51.46
TraesCS2B01G341800.2	Wheat	cytosol, peroxisome, plasma membrane	38.51	40.03
TraesCS2B01G550700.2	Wheat	plasma membrane	38.28	40.02
TraesCS6B01G291900.1	Wheat	peroxisome	37.52	39.03
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	37.06	38.84
TraesCS6B01G145600.1	Wheat	peroxisome	37.14	38.61
TraesCS1B01G099000.1	Wheat	cytosol, peroxisome, plasma membrane	37.29	38.43
TraesCS2B01G012300.1	Wheat	plasma membrane	36.61	38.24
TraesCS2B01G012200.1	Wheat	golgi	31.28	38.09
TraesCS3B01G290300.2	Wheat	peroxisome	36.68	38.04
TraesCS7B01G181700.1	Wheat	cytosol	39.42	37.87
TraesCS1B01G387400.1	Wheat	peroxisome	36.23	37.63
TraesCS3B01G291000.1	Wheat	peroxisome	35.77	37.36
TraesCS3B01G291100.3	Wheat	peroxisome	35.92	37.34
TraesCS2B01G012100.3	Wheat	plasma membrane	35.54	37.27
TraesCS2B01G358200.1	Wheat	plasma membrane	35.46	36.84
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	34.86	35.84
TraesCS3B01G290700.1	Wheat	peroxisome	27.85	34.92
TraesCS6B01G170700.1	Wheat	plasma membrane	32.95	34.53
TraesCS7B01G203400.1	Wheat	peroxisome	32.88	34.34
TraesCS7B01G203300.1	Wheat	peroxisome	32.88	34.18
TraesCS3B01G607600.1	Wheat	cytosol, plasma membrane, vacuole	32.5	30.28
TraesCS4B01G203000.1	Wheat	cytosol, plasma membrane, plastid	32.19	30.02

Protein Annotations

MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like
InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893
PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF235	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G298100	EnsemblPlants:TraesCS4B01G298100.1	TIGR:cd03249	SEG:seg	:

Description

No Description!

Coordinates

chr4B:+:583475691..583480535

Molecular Weight (calculated)

141435.0 Da

IEP (calculated)

8.674

GRAVY (calculated)

0.124

Length

1314 amino acids

Sequence
(BLAST)

0001: MVRYGAGAGA RTPVSREVSF SRDNHNKLYV TPAPVQRDVP SFGYDVSATS YSQSRSRYYG DDDAGGYEFD DEDDDDGEVE LRAGKPVSVT GLFKYSTPMD
0101: VVLLVLGCIG AMINGGSLPW YSYLFGNFVN KIVASDKTQM MKDVRQISVY MVILAVVVVI GAYLEIMCWR IVGERSALRV RREYLKAVLR QEIGFFDTEV
0201: STGEVMQSIS SDVAQIQEVM GEKMAGFVHH VFTFIFGYVV GFRTSWRIAL AVLAVTPVMM ACGIAYKAIY GGLAANEEAS YQPAGSVAQQ AISSIRTVLS
0301: FVMEDRLADR YAEWLRKASP IGVKMGFAKG AGMGMIYLVT YSQWALALWY GAKLVAQGEI KGGDAIACFF GVMVGGRGLA LSLSYSAQFA QGTAAAGRVF
0401: EIIDREPEID PYGAGGRALS AVRGRMEFKD VEFAYPSRPE SLILYNLNLI VPAAKMLALV GISGGGKSTV FALIERFYDP TRGTITLDGQ DLGSLNLKWL
0501: RSQIGLVGQE PILFAVSIIE NVMMGKENAT RQEAIAACTK ANAHTFVLGL PDGYDTQVGD RGTQLSGGQK QRIALARAII REPRILLLDE PTSALDAESE
0601: AVVQQSIDRL SVGRTVLVIA HRLATVRNAD TIAVLDRGAV VESGRHADLM ARAGPYAGLV KLASDSGRSV PAVAPGTPGT PGAAGYNSFT DNSGYDVSVS
0701: KSRYGGIRAI QEVEADAKDA RGRKAAAKFS VSEIWELQRQ EGPLLILGFL MGINAGAVFS VFPLLLGQAV QVYFDPDTDK MRRQIGYLAL AVVGLGFACI
0801: LTMTGQQGFC GWAGARLTMR VRDRLFRAIM RQEPAWFDEE DNAMGVLVTR LARDAIAFRS MFGDRYAVLL MAVGSAGVGL GICFGLDWRL TLIAMACTPL
0901: TLGASYLNLL INVGARSDEA AYARASSIAA GAVSNVRTVA ALCAQGGIVG TFNRALDGPS AKAQRKSQYM GIILGLSQGA MYGAYTVTLW AGAYFITKGW
1001: STFGDVSKIF LILVLSSFSV GQLAGLAPDT SGAPTAIAGI LSILKRRPTI NEEGTKRRTI KDGKPMDVEL RKVFFAYPSR PDVTVLNDFS LRVKFGSTVA
1101: VVGPSGSGKS TVVWLVQRFY DPLGGTVTVG GMDVRELDLK WLRGECAMVG QEPALFSGSI RENIGFGNPK AAWAEIENAA KEANIHKFIA GLPQGYDTQV
1201: GESGVQLSGG QKQRIAIARA VLKQSRILLL DEASSALDLE SEKHVQEALR RVSRRATTIT VAHRLSTIRD ADRIAVVSAG RTVEFGSHET LLANHRDGLY
1301: AAMVKAEIEA QAFA

Best Arabidopsis Sequence Match ( AT1G02520.3 )
(BLAST)

0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN

Arabidopsis Description

ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.