Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, mitochondrion, plastid, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G117600.3 | Wheat | peroxisome, plasma membrane | 90.27 | 97.42 |
| HORVU3Hr1G021600.2 | Barley | peroxisome, plasma membrane, vacuole | 88.44 | 96.35 |
| Os02t0323000-01 | Rice | cytosol, peroxisome | 26.32 | 78.01 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 14.59 | 72.33 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 62.44 | 63.61 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 48.88 | 62.87 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 27.19 | 62.57 |
| Solyc02g071350.2.1 | Tomato | plastid | 61.96 | 61.52 |
| Bra012621.1-P | Field mustard | plasma membrane | 61.0 | 61.35 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 61.72 | 61.33 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 53.27 | 61.23 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 60.05 | 60.77 |
| KRH11119 | Soybean | plasma membrane | 60.29 | 60.63 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 61.24 | 60.62 |
| KRH21125 | Soybean | plasma membrane | 60.85 | 60.51 |
| AT4G18050.2 | Thale cress | plasma membrane | 59.97 | 60.35 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 60.85 | 59.7 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 59.73 | 59.21 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 59.01 | 58.59 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 58.53 | 58.3 |
| AT5G46540.1 | Thale cress | golgi | 57.89 | 58.17 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 58.05 | 57.87 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 57.81 | 57.59 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 57.89 | 57.44 |
| TraesCS2B01G012200.1 | Wheat | golgi | 49.28 | 57.28 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 57.18 | 57.22 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.42 | 56.47 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 56.46 | 56.01 |
| Bra017539.1-P | Field mustard | plasma membrane | 45.77 | 55.67 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 55.66 | 55.48 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 45.93 | 54.96 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 55.18 | 54.7 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.82 | 42.48 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 42.58 | 42.48 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 42.42 | 42.12 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 41.63 | 38.16 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 38.04 | 37.71 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 37.8 | 37.68 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 38.84 | 37.06 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 36.92 | 36.63 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 36.6 | 36.6 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 38.36 | 34.11 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 38.28 | 34.07 |
Protein Annotations
| MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 |
| InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF272 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G136800 | EnsemblPlants:TraesCS3B01G136800.1 | TIGR:cd03249 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:+:119950829..119957976
Molecular Weight (calculated)
134783.0 Da
IEP (calculated)
8.370
GRAVY (calculated)
0.192
Length
1254 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPARGAGGG GNAAAAAPKR VPMYRLFAFA DRRDAALMAV GAAAAMANGV AMPFLAFLVG DLVDAFGPAH RADLVHAVSK VAVRFVYLAS ASGVAGFLQV
0101: SCWMVTGERQ AARIRGLYLE TILRQDISFF DVETSTGEVI ERMSSDTVLI QDAIGEKVGK FLQLVSTFLG GFIIAFTRGW LLSLVMLSSI PPVVAAAAVM
0201: SLVLSKLSNR SQMAYAEAGK VVEQTIGSIR TVISFTGESR AISEYKEHLK ISYKSAVHQG IAGGLGVGSL LLIVFCSYGL AVWYGAKLII EKGYTGGYII
0301: NVLMAIMTGA MALGQSSPCL TAFASGQIAA HKMFATIYRK PEIDASDKSG LILENFVGNV ELKDVHFSYP ARPEQLIFNG FSISIPTGMT VALVGESGSG
0401: KSTVIGLVER FYDPQSGEIL LDGVNLKQLN LSWVRQKIGL VSQEPILFTT TIRENIEYGK KGATEEEIRR STVLANAAKF IDKLPNGLDT MVGEHGTQLS
0501: GGQKQRIAIA RAILKNPSIL LLDEATSALD AESEHVVQDA LNNIMVNRTT IVVAHRLSTI KNADTISVLH RGQLVEQGPH VELIKDPDGA YSQLLRLQEV
0601: NTKREGSHGD DSIRLQSASD AANSASQHSS IKPSFGRSMS RYSPQGGSRI NSQTFSLHEH ETEGVDDAKS GKKVIRRLLY LHKPEVPILL LGCTAAAANG
0701: AILPVFGMLL SSAINTFYEP PQQLRKDSVF WAEMYVMLGV ISIFVIPLQY ALFNMAGGKL IERIRAVSFS RVVYQEIGWF DDPLNSSGAI GSRLSGDAAS
0801: VKSIAGDVLS LIVQSISTAV VGIVIAMIAN WKLACIVLCF LPCVIAQSYA QTRLMRGFGA DAKEMYEQAS TIATDAIGNI RTVASFCAEE KIIESYRKKC
0901: EGPVKQGVRQ GAISGVGYGL SFALLFCFYA ISFYVGARFV HNGTAEVGQV FRVFFALTMM AVGVSQSSSL ARDFAKVQNA AASILKIIDR KSKIDASHEV
1001: GTTLEAVEGN IELQHVSFKY PARTDVQIFR DLCLRIPSGK TIALVGESGS GKSTVIALIE RFYDPDSGCI FLDGVDLKSL KLTWLRQQIG LVGQEPVLFN
1101: DTIRANIAYG KMEQVSEDEI IAVAKAANAD RFISTLPNGY DTSVGERGVQ MSGGQKQRIA IARAILKNPK LLLLDEATSA LDAESERIVQ EALDRVTVGR
1201: TTVVVAHRLS TITAADKIAV VKNGVVAEEG RHEQLLRLPG GAYASLVALQ SSSS
0101: SCWMVTGERQ AARIRGLYLE TILRQDISFF DVETSTGEVI ERMSSDTVLI QDAIGEKVGK FLQLVSTFLG GFIIAFTRGW LLSLVMLSSI PPVVAAAAVM
0201: SLVLSKLSNR SQMAYAEAGK VVEQTIGSIR TVISFTGESR AISEYKEHLK ISYKSAVHQG IAGGLGVGSL LLIVFCSYGL AVWYGAKLII EKGYTGGYII
0301: NVLMAIMTGA MALGQSSPCL TAFASGQIAA HKMFATIYRK PEIDASDKSG LILENFVGNV ELKDVHFSYP ARPEQLIFNG FSISIPTGMT VALVGESGSG
0401: KSTVIGLVER FYDPQSGEIL LDGVNLKQLN LSWVRQKIGL VSQEPILFTT TIRENIEYGK KGATEEEIRR STVLANAAKF IDKLPNGLDT MVGEHGTQLS
0501: GGQKQRIAIA RAILKNPSIL LLDEATSALD AESEHVVQDA LNNIMVNRTT IVVAHRLSTI KNADTISVLH RGQLVEQGPH VELIKDPDGA YSQLLRLQEV
0601: NTKREGSHGD DSIRLQSASD AANSASQHSS IKPSFGRSMS RYSPQGGSRI NSQTFSLHEH ETEGVDDAKS GKKVIRRLLY LHKPEVPILL LGCTAAAANG
0701: AILPVFGMLL SSAINTFYEP PQQLRKDSVF WAEMYVMLGV ISIFVIPLQY ALFNMAGGKL IERIRAVSFS RVVYQEIGWF DDPLNSSGAI GSRLSGDAAS
0801: VKSIAGDVLS LIVQSISTAV VGIVIAMIAN WKLACIVLCF LPCVIAQSYA QTRLMRGFGA DAKEMYEQAS TIATDAIGNI RTVASFCAEE KIIESYRKKC
0901: EGPVKQGVRQ GAISGVGYGL SFALLFCFYA ISFYVGARFV HNGTAEVGQV FRVFFALTMM AVGVSQSSSL ARDFAKVQNA AASILKIIDR KSKIDASHEV
1001: GTTLEAVEGN IELQHVSFKY PARTDVQIFR DLCLRIPSGK TIALVGESGS GKSTVIALIE RFYDPDSGCI FLDGVDLKSL KLTWLRQQIG LVGQEPVLFN
1101: DTIRANIAYG KMEQVSEDEI IAVAKAANAD RFISTLPNGY DTSVGERGVQ MSGGQKQRIA IARAILKNPK LLLLDEATSA LDAESERIVQ EALDRVTVGR
1201: TTVVVAHRLS TITAADKIAV VKNGVVAEEG RHEQLLRLPG GAYASLVALQ SSSS
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.