Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G009900.1 | Wheat | plasma membrane | 97.54 | 97.54 |
| TraesCS2D01G010500.1 | Wheat | plasma membrane | 97.3 | 97.3 |
| HORVU2Hr1G001530.10 | Barley | plasma membrane | 93.96 | 94.18 |
| HORVU2Hr1G001630.2 | Barley | plasma membrane | 93.96 | 94.18 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 83.07 | 82.48 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 81.56 | 81.88 |
| TraesCS2B01G012200.1 | Wheat | golgi | 70.11 | 81.74 |
| KXG33192 | Sorghum | cytosol | 79.09 | 78.41 |
| Zm00001d043762_P001 | Maize | cytosol | 79.01 | 78.08 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 15.5 | 77.08 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 67.49 | 67.17 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 54.93 | 65.94 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 65.74 | 65.43 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 65.66 | 65.3 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 63.27 | 63.27 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 60.81 | 62.14 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 62.72 | 61.74 |
| Bra012621.1-P | Field mustard | plasma membrane | 60.33 | 60.87 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 58.51 | 59.4 |
| KRH21125 | Soybean | plasma membrane | 59.54 | 59.4 |
| Solyc02g071350.2.1 | Tomato | plastid | 59.46 | 59.22 |
| AT4G18050.2 | Thale cress | plasma membrane | 58.59 | 59.15 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 59.14 | 58.95 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 25.52 | 58.9 |
| KRH11119 | Soybean | plasma membrane | 58.27 | 58.78 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 45.55 | 58.77 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 57.87 | 58.05 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 58.27 | 57.94 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 50.24 | 57.93 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 57.31 | 57.09 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 56.28 | 56.24 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 56.84 | 56.08 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 56.04 | 56.0 |
| AT5G46540.1 | Thale cress | golgi | 55.17 | 55.61 |
| Bra017539.1-P | Field mustard | plasma membrane | 43.24 | 52.76 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 42.61 | 42.64 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 42.13 | 41.96 |
| TraesCS2B01G341800.2 | Wheat | cytosol, peroxisome, plasma membrane | 42.13 | 41.93 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 38.47 | 38.26 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 37.52 | 37.64 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 40.86 | 37.57 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 37.2 | 37.2 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 37.2 | 37.03 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 38.24 | 36.61 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 37.84 | 33.78 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 37.76 | 33.69 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF204 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G012300 | EnsemblPlants:TraesCS2B01G012300.1 | TIGR:cd03249 | SEG:seg |
Description
No Description!
Coordinates
chr2B:-:6210160..6226436
Molecular Weight (calculated)
135927.0 Da
IEP (calculated)
6.413
GRAVY (calculated)
0.146
Length
1258 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDTAAVAAEG EEESVGQQEK VSFMGLFRYA DGTDLLLMLV GTVAALANGV SQPLMTIIFG DTLNAFGDAT GDDVLQRVNK VVLQFVYLGI GTTIVSFLQV
0101: SCWTLTGERQ ATRIRSLYLK AVLRQDISFF DLEMTTGQIV SRMSGDTVLV QDAIGEKVGK FQSLVATFVG GFIVGFVKGW LLSLVMLAAI PPVVLTGAVV
0201: AKVLSKISSR RQASYSAAGN VVEQTISAIK TVVSFNGEKQ AITTYNKLIH KSYKTAVEEG LTNGFGMGSA FFALFSSYGL AIWYGGKLAL TKGYTGGQVI
0301: TVILSIIIGA ATLGNAAPCM TAFVEGQLAA HRLFTTIRRK PKIDPDDNNG KQLEDMRGEV ELKDVYFSYP ARPEQLIFDG FSLLVPSGTT MAIVGESGSG
0401: KSTVVSLVER FYDPHDGEVL IDGINIKSLQ LDSIRGKIGL VSQEPVLFMT SIKDNITYGK EDATIEEIKR AAELANAAIF IDKLPNGYDT MVGQRGAQLS
0501: GGQKQRIAIA RAIIKNPKIL LLDEATSALD VESERIVQEA LDRIMVDRTT LVVAHRLTTV RNADCISVVQ HGKIVEQGSH DELVLNLDGA YSQLVLLQES
0601: HKEHKIDHRL STPRSKSKSL SMKRSISGSI GNSSGHSFTL PFGLPSAIEF PGGNETLGQN QEELNGDGEV RKKAPMVQLA LLNKPEVPIL LLGSLAAAVH
0701: GVLFPVFGLI LSGAIKAFYE QPDKLRKDTS FWGLMCVVMG IISIISIPVE FSLFGLAGGK LIERIRALSF QSIVHQEVAW FDDPRNSSGA LGARLSIDSS
0801: NVRRLVGDNL SLMVQIISNL VTGVVIAIIA DWKLALIIIC VIPLTGIQGY ANVKFLTGFS QDAKMMNEDA SQVATDAVSS IRTVASFCSE KRITRIYEQK
0901: CEASKNQGFK TGIAGGIGFG FSFLMLYLTY GLCFYVGGQF VRHGKSNFGD VFEVFFALML ATLGVSQTSA MASDSKKAKD SAISIFALLD RKSEIDSSSN
1001: EGLTLDEVKG NIDFRHVSFN YPTRPDVVIF NNFTLHIPYG KTIALVGESG CGKSTVISLL ERFYNPDSGT ILLDGVEIKS LNINWLRKQT GLVSQEPVLF
1101: NDTIRANIAY GKDEEVSEEE LIAAAKASNA HEFISSLPQG YETSVGERGI QLSGGQKQRV AIARAILKDP KILLLDEATS ALDAESERIV QNALDHVMVG
1201: RTTVAMAHRL STIKGADVIA VLKDGAIVEK GGHESLMIIK DGVYASLVEL RSAHHENA
0101: SCWTLTGERQ ATRIRSLYLK AVLRQDISFF DLEMTTGQIV SRMSGDTVLV QDAIGEKVGK FQSLVATFVG GFIVGFVKGW LLSLVMLAAI PPVVLTGAVV
0201: AKVLSKISSR RQASYSAAGN VVEQTISAIK TVVSFNGEKQ AITTYNKLIH KSYKTAVEEG LTNGFGMGSA FFALFSSYGL AIWYGGKLAL TKGYTGGQVI
0301: TVILSIIIGA ATLGNAAPCM TAFVEGQLAA HRLFTTIRRK PKIDPDDNNG KQLEDMRGEV ELKDVYFSYP ARPEQLIFDG FSLLVPSGTT MAIVGESGSG
0401: KSTVVSLVER FYDPHDGEVL IDGINIKSLQ LDSIRGKIGL VSQEPVLFMT SIKDNITYGK EDATIEEIKR AAELANAAIF IDKLPNGYDT MVGQRGAQLS
0501: GGQKQRIAIA RAIIKNPKIL LLDEATSALD VESERIVQEA LDRIMVDRTT LVVAHRLTTV RNADCISVVQ HGKIVEQGSH DELVLNLDGA YSQLVLLQES
0601: HKEHKIDHRL STPRSKSKSL SMKRSISGSI GNSSGHSFTL PFGLPSAIEF PGGNETLGQN QEELNGDGEV RKKAPMVQLA LLNKPEVPIL LLGSLAAAVH
0701: GVLFPVFGLI LSGAIKAFYE QPDKLRKDTS FWGLMCVVMG IISIISIPVE FSLFGLAGGK LIERIRALSF QSIVHQEVAW FDDPRNSSGA LGARLSIDSS
0801: NVRRLVGDNL SLMVQIISNL VTGVVIAIIA DWKLALIIIC VIPLTGIQGY ANVKFLTGFS QDAKMMNEDA SQVATDAVSS IRTVASFCSE KRITRIYEQK
0901: CEASKNQGFK TGIAGGIGFG FSFLMLYLTY GLCFYVGGQF VRHGKSNFGD VFEVFFALML ATLGVSQTSA MASDSKKAKD SAISIFALLD RKSEIDSSSN
1001: EGLTLDEVKG NIDFRHVSFN YPTRPDVVIF NNFTLHIPYG KTIALVGESG CGKSTVISLL ERFYNPDSGT ILLDGVEIKS LNINWLRKQT GLVSQEPVLF
1101: NDTIRANIAY GKDEEVSEEE LIAAAKASNA HEFISSLPQG YETSVGERGI QLSGGQKQRV AIARAILKDP KILLLDEATS ALDAESERIV QNALDHVMVG
1201: RTTVAMAHRL STIKGADVIA VLKDGAIVEK GGHESLMIIK DGVYASLVEL RSAHHENA
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.