Factsheet for Solyc02g071340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g071350.2.1	Tomato	plastid	81.16	81.16
TraesCS6B01G145800.1	Wheat	cytosol	14.57	72.73
Os01t0695800-01	Rice	plasma membrane	14.89	71.76
VIT_10s0003g02540.t01	Wine grape	plasma membrane	68.65	70.43
Bra012621.1-P	Field mustard	plasma membrane	67.06	67.92
KRH21125	Soybean	plasma membrane	66.9	67.01
AT4G18050.2	Thale cress	plasma membrane	65.95	66.85
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	28.74	66.61
VIT_10s0003g02570.t01	Wine grape	plasma membrane	64.85	66.1
KRH11119	Soybean	plasma membrane	65.0	65.84
CDY35168	Canola	golgi, peroxisome, plasma membrane	56.61	65.54
VIT_10s0003g02580.t01	Wine grape	plasma membrane	64.61	64.51
AT5G46540.1	Thale cress	golgi	62.63	63.38
GSMUA_Achr2P20180_001	Banana	plasma membrane	47.74	61.85
HORVU3Hr1G021600.2	Barley	peroxisome, plasma membrane, vacuole	55.9	61.34
Solyc03g005860.2.1	Tomato	plasma membrane	61.12	61.32
TraesCS3A01G117600.3	Wheat	peroxisome, plasma membrane	55.9	60.76
Bra017539.1-P	Field mustard	plasma membrane	49.01	60.04
Os05t0548300-01	Rice	plasma membrane	27.63	59.97
TraesCS3D01G257500.1	Wheat	plasma membrane	59.54	59.87
TraesCS3A01G257500.1	Wheat	plasma membrane	59.54	59.83
TraesCS6D01G107600.1	Wheat	cytosol, plasma membrane, vacuole	42.99	59.74
TraesCS3B01G290300.2	Wheat	peroxisome	59.7	59.51
TraesCS3B01G136800.1	Wheat	golgi, mitochondrion, peroxisome, plasma membrane, plastid	58.59	59.01
KXG33192	Sorghum	cytosol	58.99	58.71
Zm00001d043762_P001	Maize	cytosol	58.99	58.52
Solyc06g009280.1.1	Tomato	cytosol, peroxisome, plasma membrane	59.38	58.18
KXG35311	Sorghum	plasma membrane	57.17	57.53
HORVU2Hr1G001630.2	Barley	plasma membrane	57.17	57.53
HORVU2Hr1G001530.10	Barley	plasma membrane	57.17	57.53
TraesCS2B01G012100.3	Wheat	plasma membrane	56.93	57.38
TraesCS3D01G257900.1	Wheat	peroxisome	57.32	57.37
TraesCS2B01G012300.1	Wheat	plasma membrane	57.09	57.31
TraesCS2A01G009600.1	Wheat	plasma membrane	56.69	57.14
TraesCS2D01G010500.1	Wheat	plasma membrane	56.85	57.07
TraesCS3D01G258100.1	Wheat	plasma membrane	56.45	57.04
TraesCS2A01G009900.1	Wheat	plasma membrane	56.77	57.0
TraesCS2D01G010400.1	Wheat	plasma membrane	56.53	56.98
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	57.64	56.96
Zm00001d011644_P002	Maize	plasma membrane	57.8	56.81
TraesCS3A01G258200.1	Wheat	peroxisome	56.22	56.8
TraesCS3A01G369700.1	Wheat	peroxisome	57.48	56.72
HORVU3Hr1G065320.47	Barley	plasma membrane	57.17	56.72
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	57.4	56.68
Zm00001d009447_P002	Maize	plasma membrane	56.69	56.65
HORVU6Hr1G021320.43	Barley	peroxisome	56.69	56.6
Os05t0548500-00	Rice	plasma membrane	56.45	56.59
Os01t0534700-00	Rice	plasma membrane	49.49	56.51
Zm00001d005528_P001	Maize	plasma membrane	53.68	56.36
HORVU3Hr1G065280.1	Barley	plasma membrane	56.29	56.34
KXG32655	Sorghum	peroxisome	57.09	55.85
TraesCS6B01G145600.1	Wheat	peroxisome	55.82	55.78
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	36.74	55.57
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	55.42	55.38
TraesCS2B01G012200.1	Wheat	golgi	47.27	55.33
TraesCS5A01G495900.1	Wheat	plasma membrane	55.11	54.93
TraesCS1B01G387400.1	Wheat	peroxisome	54.55	54.47
Solyc06g009290.2.1	Tomato	nucleus	60.33	54.43
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	57.01	54.42
TraesCS1D01G374300.1	Wheat	cytosol, peroxisome, plasma membrane	54.55	54.29
TraesCS3A01G258400.3	Wheat	peroxisome	54.08	54.29
TraesCS3D01G258300.1	Wheat	cytosol, peroxisome, plasma membrane	54.32	54.23
TraesCS3A01G258000.1	Wheat	mitochondrion	56.93	54.22
TraesCS1A01G368500.1	Wheat	cytosol, peroxisome, plasma membrane	54.24	54.15
Os01t0695700-00	Rice	plasma membrane	54.32	54.14
Solyc12g098840.1.1	Tomato	peroxisome	54.79	54.06
HORVU3Hr1G065240.14	Barley	cytosol	54.71	53.98
TraesCS3B01G291100.3	Wheat	peroxisome	54.0	53.96
HORVU1Hr1G078450.24	Barley	plasma membrane	54.0	53.91
TraesCS3D01G258200.2	Wheat	peroxisome	53.6	53.77
TraesCS3B01G291000.1	Wheat	peroxisome	53.37	53.58
TraesCS3B01G290700.1	Wheat	peroxisome	44.26	53.34
EES01319	Sorghum	cytosol	53.76	53.3
Zm00001d043766_P005	Maize	cytosol	53.21	52.58
Solyc11g067300.1.1	Tomato	plasma membrane	51.54	51.67
Os02t0323000-01	Rice	cytosol, peroxisome	17.02	50.83
Solyc08g076720.2.1	Tomato	unclear	43.39	43.6
Solyc02g087870.2.1	Tomato	plasma membrane	42.2	42.67
Solyc05g013890.1.1	Tomato	cytosol, plasma membrane	32.15	42.56
Solyc09g008240.2.1	Tomato	peroxisome	42.2	40.56
Solyc07g018130.1.1	Tomato	plasma membrane	40.7	40.31
Solyc03g093650.2.1	Tomato	plasma membrane	38.72	39.85
Solyc06g072960.1.1	Tomato	peroxisome	31.75	39.01
Solyc07g064120.1.1	Tomato	plasma membrane	38.88	39.0
OQU78384	Sorghum	plasma membrane	56.37	37.75
Solyc04g010310.2.1	Tomato	plasma membrane	35.63	35.02

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439
InterPro:IPR011527	InterPro:IPR036640	UniProt:K4B8B0	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664
ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF204	SMART:SM00382
SUPFAM:SSF52540	SUPFAM:SSF90123	EnsemblPlantsGene:Solyc02g071340.1	EnsemblPlants:Solyc02g071340.1.1	TMHMM:TMhelix	UniParc:UPI0002768E00
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2:+:40820275..40825906

Molecular Weight (calculated)

137746.0 Da

IEP (calculated)

6.049

GRAVY (calculated)

0.163

Length

1263 amino acids

Sequence
(BLAST)

0001: MEEKSSIVKD EKVPFYKLFL FADRVDIALM TIGTFGAIGE GLTQPLMTLI FGQIINSFGG ASSSNEVFHL VSEAAVYYVY LAIGSGIASF LRMSCWMVTG
0101: ERQAIRIRGL YLKTILRQDI AFFDTETTTG QVIGTMSGDT FLIQDALGDK VGKFIQYLSA FVGGFIIAFT KGWLLSLVLV SCIPALVIAG GAMASIMSKM
0201: SSRGQMTYAQ AGDIVEQTVG AMRTVAAFNG EKLAMIKYDN TLKIAYAFTV QQGLVSGVGF GTFLLVLFST YGLAIWYGSK LIIEKGYRGG YVVNVLMAIM
0301: IGGMSLGQTT PSLNAFAAAQ VAALKIFETI SRKPLIDTSD MSGVVLEDIE GEIELKDVYF RYPSRPDVQI FSGFSLVVPS GKTVALVGQS GSGKSTIISL
0401: LERFYDPESG EVLLDGVNLK KYQLKWLRQQ MGLVSQEPIL FATTIRENIS YGKDNATEEE ISAAIELANA ANFIDKLPQG LDTMVGEHGT QLSGGQKQRL
0501: AIARAIVKNP KVLLLDEATS ALDAESERIV QEALEQVMAK RTTMLVAHRL TTIRNAGLIA VLHDGKLLEQ GNHDKLVQDP NGAYSQLMRM QEDKGGDEEE
0601: NLIMKNMDSD KVNITMKLDN ISWSSNPPLS AAKRSTNQGS PRNSFSPSYP VRGMIDIHEA TIGDVDEKED DEQSSENRKK IPIRRLAELN KPELPYILLG
0701: SLAAIMHGLV MPLFGLLLSE AIKSFFNPPH KLRNESQFWG LMYVGLGVVI WLVIPFQNYL FGVAGGKLIE RIRSLTFKKV VHQEISWFDD PVNSSGALCA
0801: RLSIDASTVR TVVGDALALI VQNMATALGG LAIAFTANWI LSFIILVVLP LICAPGLFQT KFHKGYSADA KVMYEEASQI ANDAVGGIRT VASFCAEDKV
0901: MDMYQKKCEG PIKKGVKIGI VSGASLGFGS FTLYSSLGFC FFIGSVLIDH RLATVDQVFK VFFALILAAV GITQSTTMAP NFNKAKDSIT SIFDILDRKS
1001: IIDSSSDVGT TLAVVHGDIE FRLVSYRYAT RPDVQIFKDL CLIIPSGKTV ALVGESGSGK STVISLIERF YDPESGEIYL DGVEIKQFNL SWLRQQMGLV
1101: SQEPILFNET IRDNIAYSRQ GNATEEEIIE AAKSANAHNF ISSLPQGYDT SVGERGIQLS GGQKQRIAIA RAILKDPKIL LLDEATSALD AESERIVQEA
1201: LDRVMVNRTT VVVAHRLATI KGADIIAVMK NGVIVEKGRH DVLMNIKDGA YASLVALHMT SAY

Best Arabidopsis Sequence Match ( AT4G18050.1 )
(BLAST)

0001: MEEKSSKKND GGNQKVSFFK LFSFADKTDV VLMTVGTIAA AGNGLTQPFM TLIFGQLINA FGTTDPDHMV REVWKVAVKF IYLAVYSCVV AFLQVSCWMV
0101: TGERQSATIR GLYLKTILRQ DIGYFDTETN TGEVIGRMSG DTILIQDAMG EKVGKFTQLL CTFLGGFAIA FYKGPLLAGV LCSCIPLIVI AGAAMSLIMS
0201: KMAGRGQVAY AEAGNVVEQT VGAIRTVVAF TGEKQATEKY ESKLEIAYKT VVQQGLISGF GLGTMLAVIF CSYGLAVWYG AKLIMEKGYN GGQVINVIFA
0301: VLTGGMSLGQ TSPSLNAFAA GRAAAFKMFE TIKRSPKIDA YDMSGSVLED IRGDIELKDV YFRYPARPDV QIFAGFSLFV PNGKTVALVG QSGSGKSTVI
0401: SLIERFYDPE SGQVLIDNID LKKLQLKWIR SKIGLVSQEP VLFATTIKEN IAYGKEDATD QEIRTAIELA NAAKFIDKLP QGLDTMVGEH GTQMSGGQKQ
0501: RLAIARAILK NPKILLLDEA TSALDAESER IVQDALVNLM SNRTTVVVAH RLTTIRTADV IAVVHQGKIV EKGTHDEMIQ DPEGAYSQLV RLQEGSKEEA
0601: TESERPETSL DVERSGSLRL SSAMRRSVSR NSSSSRHSFS LASNMFFPGV NVNQTDEMED EENNVRHKKV SLKRLAHLNK PEIPVLVLGS IAAMVHGTVF
0701: PIFGLLLSSS INMFYEPAKI LKKDSHFWAL IYIALGLTNF VMIPVQNYFF GIAGGKLIKR IRSMCFDKVV HQEISWFDDT ANSRSLVGDA LALIVQNIAT
0801: VTTGLIIAFT ANWILALIVL ALSPFIVIQG YAQTKFLTGF SADAKAMYEE ASQVANDAVS SIRTVASFCA EEKVMDLYQQ KCDGPKKNGV RLGLLSGAGF
0901: GFSFFFLYCI NCVCFVSGAG LIQIGKATFG EVFKVFFALT IMAIGVSQTS AMAPDSNKAK DSAASIFDIL DSTPKIDSSS DEGTTLQNVN GDIEFRHVSF
1001: RYPMRPDVQI FRDLCLTIPS GKTVALVGES GSGKSTVISM IERFYNPDSG KILIDQVEIQ TFKLSWLRQQ MGLVSQEPIL FNETIRSNIA YGKTGGATEE
1101: EIIAAAKAAN AHNFISSLPQ GYDTSVGERG VQLSGGQKQR IAIARAILKD PKILLLDEAT SALDAESERV VQDALDRVMV NRTTVVVAHR LTTIKNADVI
1201: AVVKNGVIAE KGRHETLMKI SGGAYASLVT LHMSAN

Arabidopsis Description

PGP9P-glycoprotein 9 [Source:TAIR;Acc:AT4G18050]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.