Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 90.78 | 88.59 |
| KXG35311 | Sorghum | plasma membrane | 81.95 | 84.3 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 80.94 | 81.77 |
| TraesCS3D01G362700.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.87 | 81.63 |
| TraesCS3A01G369700.1 | Wheat | peroxisome | 80.79 | 81.48 |
| Os01t0533900-01 | Rice | endoplasmic reticulum, vacuole | 52.52 | 81.2 |
| Os01t0534700-00 | Rice | plasma membrane | 66.85 | 78.03 |
| TraesCS5A01G495900.1 | Wheat | plasma membrane | 73.43 | 74.82 |
| KXG33192 | Sorghum | cytosol | 64.06 | 65.17 |
| VIT_10s0003g02540.t01 | Wine grape | plasma membrane | 60.42 | 63.36 |
| GSMUA_Achr2P20180_001 | Banana | plasma membrane | 46.4 | 61.44 |
| Bra012621.1-P | Field mustard | plasma membrane | 58.64 | 60.71 |
| KRH11119 | Soybean | plasma membrane | 58.17 | 60.22 |
| OQU77362 | Sorghum | mitochondrion, plasma membrane | 53.45 | 59.79 |
| KRH21125 | Soybean | plasma membrane | 58.33 | 59.71 |
| Solyc02g071350.2.1 | Tomato | plastid | 58.25 | 59.54 |
| PGSC0003DMT400007960 | Potato | plasma membrane | 58.17 | 59.51 |
| VIT_10s0003g02570.t01 | Wine grape | plasma membrane | 56.78 | 59.16 |
| AT4G18050.2 | Thale cress | plasma membrane | 57.09 | 59.15 |
| CDY35168 | Canola | golgi, peroxisome, plasma membrane | 49.81 | 58.94 |
| EES01319 | Sorghum | cytosol | 58.02 | 58.79 |
| KXG32330 | Sorghum | plastid | 57.71 | 58.2 |
| VIT_10s0003g02580.t01 | Wine grape | plasma membrane | 56.86 | 58.02 |
| VIT_10s0003g02550.t01 | Wine grape | cytosol, nucleus, peroxisome | 24.32 | 57.61 |
| Solyc02g071340.1.1 | Tomato | plasma membrane | 55.85 | 57.09 |
| AT5G46540.1 | Thale cress | golgi | 53.99 | 55.85 |
| PGSC0003DMT400034908 | Potato | plasma membrane | 53.68 | 55.04 |
| Solyc03g005860.2.1 | Tomato | plasma membrane | 53.37 | 54.73 |
| Bra017539.1-P | Field mustard | plasma membrane | 42.45 | 53.15 |
| OQU84543 | Sorghum | endoplasmic reticulum, plasma membrane | 41.21 | 43.04 |
| EES05688 | Sorghum | plasma membrane | 41.52 | 42.54 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 40.98 | 41.92 |
| EES05229 | Sorghum | plasma membrane | 40.05 | 41.56 |
| EES12952 | Sorghum | cytosol, peroxisome, plasma membrane | 40.28 | 41.07 |
| OQU78384 | Sorghum | plasma membrane | 58.71 | 40.19 |
| OQU79902 | Sorghum | nucleus, peroxisome, plasma membrane | 36.33 | 37.22 |
| OQU79903 | Sorghum | peroxisome | 35.63 | 36.31 |
| KXG34231 | Sorghum | cytosol, plasma membrane, vacuole | 36.56 | 33.69 |
| OQU80682 | Sorghum | plasma membrane | 40.05 | 33.55 |
| EER92449 | Sorghum | plasma membrane | 36.41 | 33.26 |
| KXG25805 | Sorghum | peroxisome, plastid | 35.48 | 29.59 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1B6Q455 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlants:KXG32655 | ProteinID:KXG32655 | ProteinID:KXG32655.2 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24221 | PANTHER:PTHR24221:SF239 | SMART:SM00382 | EnsemblPlantsGene:SORBI_3003G180400 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0009DC8622 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:47210102..47230352
Molecular Weight (calculated)
139655.0 Da
IEP (calculated)
7.568
GRAVY (calculated)
0.100
Length
1291 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGDDGRGKGA EASAAGDGGG REEGAAAAGS RENSNSKPAA AVGRVPLYRL FAFADRTDAL LMAVGAVAAV ANGMAQPTMT FIFGDVIDAF GSSASPDVLH
0101: RVVKVIMNFV YLAIGAGLAS TLQVSCWTIT GERQAARIRA LYLKAILRQD IAFFDMEMST GQVVERMAGD TFLIQDAIGE KVGKSLQLLS TFVGGFIIAF
0201: VRGWLLALVM LSSIPPIAIA GAIISKMMTR LSTRMQAKYG DAGNVVEQML GSIRTVVSYN GEKQAIRTYN KFIRKAYESA LQEGAVNGLG LGSVMAILFC
0301: SYGLAVWYGS RLIVERGYNG GMVISVIMAV MIGAMSLGQA TPSVTAFAEG QGAAYRMFKT IERKPDIDIY DTTGVILEDV KGDVELKDVY FSYPTRSEHL
0401: VFDGFSLRVP NGTTMALVGE SGSGKSTVIS LVERFYDPQA GEVLIDGVDI RKMNVGWIRG KIGLVSQEPV LFSTTIRENI AYGMENLTLE EIKGATELAN
0501: AAKFIDKLPN GLDTLVGERG TQLSGGQKQR IAIARAIVKN PRILLLDEAT SALDMESERV VQEAMNRVML ERTTIIVAHR LSTVKNADVI SVLQHGKMVQ
0601: QGSHVELMKI PEGAYSQLIH LQETRQGADF SSVDPDIIVT NGFGSRSTNS KPRSQRISRQ RSTSKGSSSF GHSGRQSFPT PLSVPDPMEL DGSPDVEETT
0701: DKINRAPKKA PIARLFYLNK PEALVLALGS ITAAMHGVIL PIYGILISTA IKVFYEPPEE LLKDCRFWAS MFVVLGACAF VLIPIEYFLF GLAGGKLVER
0801: VRSLTFQSVM RQEISWFDKP EHSSGTIGAR LSTDAMNLRR LVGDNLALNV QTVSTVISGF TIAVVANWKL ALIITVVVPF VGFQGYAQMK FLKGLNRNAK
0901: LKYEEASQVA TDAVGGIRTI ASFSAEKKVM DAYEKKCEYP IKQGIREGIV GGLGFGFSFL AFYFTYALCF YVGAKFVQQG KATFPEVFRV FFVLVLATSG
1001: ISRTSAVGSD STKANDAAAS VFEILDRESK IDYSCEDGIT ITSVRGEIGF QNVCFKYPSR PNVQIFKDLS LNIPYGKTVA LVGESGSGKS TAIALLERFY
1101: DPDSGKILFD DVELQTLKVS WLRQQVGLVS QEPVLFNDTI RSNIAYGKQG EASEEEIVAA AEAANAHQFI SALPDGYNTI VGERGIQLSG GQKQRVAIAR
1201: AIIKDPKVLL LDEATSALDA ESERVVQEAL DHVMVGRTTV VVAHRLSTIR GADIIAVFKN GAVAEKGRHE ELMRIKDGTY ASLVELSSSS S
0101: RVVKVIMNFV YLAIGAGLAS TLQVSCWTIT GERQAARIRA LYLKAILRQD IAFFDMEMST GQVVERMAGD TFLIQDAIGE KVGKSLQLLS TFVGGFIIAF
0201: VRGWLLALVM LSSIPPIAIA GAIISKMMTR LSTRMQAKYG DAGNVVEQML GSIRTVVSYN GEKQAIRTYN KFIRKAYESA LQEGAVNGLG LGSVMAILFC
0301: SYGLAVWYGS RLIVERGYNG GMVISVIMAV MIGAMSLGQA TPSVTAFAEG QGAAYRMFKT IERKPDIDIY DTTGVILEDV KGDVELKDVY FSYPTRSEHL
0401: VFDGFSLRVP NGTTMALVGE SGSGKSTVIS LVERFYDPQA GEVLIDGVDI RKMNVGWIRG KIGLVSQEPV LFSTTIRENI AYGMENLTLE EIKGATELAN
0501: AAKFIDKLPN GLDTLVGERG TQLSGGQKQR IAIARAIVKN PRILLLDEAT SALDMESERV VQEAMNRVML ERTTIIVAHR LSTVKNADVI SVLQHGKMVQ
0601: QGSHVELMKI PEGAYSQLIH LQETRQGADF SSVDPDIIVT NGFGSRSTNS KPRSQRISRQ RSTSKGSSSF GHSGRQSFPT PLSVPDPMEL DGSPDVEETT
0701: DKINRAPKKA PIARLFYLNK PEALVLALGS ITAAMHGVIL PIYGILISTA IKVFYEPPEE LLKDCRFWAS MFVVLGACAF VLIPIEYFLF GLAGGKLVER
0801: VRSLTFQSVM RQEISWFDKP EHSSGTIGAR LSTDAMNLRR LVGDNLALNV QTVSTVISGF TIAVVANWKL ALIITVVVPF VGFQGYAQMK FLKGLNRNAK
0901: LKYEEASQVA TDAVGGIRTI ASFSAEKKVM DAYEKKCEYP IKQGIREGIV GGLGFGFSFL AFYFTYALCF YVGAKFVQQG KATFPEVFRV FFVLVLATSG
1001: ISRTSAVGSD STKANDAAAS VFEILDRESK IDYSCEDGIT ITSVRGEIGF QNVCFKYPSR PNVQIFKDLS LNIPYGKTVA LVGESGSGKS TAIALLERFY
1101: DPDSGKILFD DVELQTLKVS WLRQQVGLVS QEPVLFNDTI RSNIAYGKQG EASEEEIVAA AEAANAHQFI SALPDGYNTI VGERGIQLSG GQKQRVAIAR
1201: AIIKDPKVLL LDEATSALDA ESERVVQEAL DHVMVGRTTV VVAHRLSTIR GADIIAVFKN GAVAEKGRHE ELMRIKDGTY ASLVELSSSS S
0001: MNGDGAREGD SVSHEPSTSK SPKEGEETKK EEKSEEKANT VPFYKLFAFA DSSDVLLMIC GSIGAIGNGM SLPFMTLLFG DLIDSFGKNQ NNKDIVDVVS
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
0101: KVCLKFVYLG LGTLGAAFLQ VACWMITGER QAARIRSTYL KTILRQDIGF FDVETNTGEV VGRMSGDTVL IQDAMGEKVG KFIQLVSTFV GGFVLAFIKG
0201: WLLTLVMLTS IPLLAMAGAA MALIVTRASS RGQAAYAKAA TVVEQTIGSI RTVASFTGEK QAINSYKKFI TSAYKSSIQQ GFSTGLGLGV MFFVFFSSYA
0301: LAIWFGGKMI LEKGYTGGAV INVIIIVVAG SMSLGQTSPC VTAFAAGQAA AYKMFETIKR KPLIDAYDVN GKVLEDIRGD IELKDVHFSY PARPDEEIFD
0401: GFSLFIPSGA TAALVGESGS GKSTVISLIE RFYDPKSGAV LIDGVNLKEF QLKWIRSKIG LVSQEPVLFS SSIMENIAYG KENATVEEIK AATELANAAK
0501: FIDKLPQGLD TMVGEHGTQL SGGQKQRIAI ARAILKDPRI LLLDEATSAL DAESERVVQE ALDRVMVNRT TVIVAHRLST VRNADMIAVI HRGKMVEKGS
0601: HSELLKDSEG AYSQLIRLQE INKDVKTSEL SSGSSFRNSN LKKSMEGTSS VGNSSRHHSL NVLGLTTGLD LGSHSQRAGQ DETGTASQEP LPKVSLTRIA
0701: ALNKPEIPVL LLGTVAAAIN GAIFPLFGIL ISRVIEAFFK PAHELKRDSR FWAIIFVALG VTSLIVSPTQ MYLFAVAGGK LIRRIRSMCF EKAVHMEVAW
0801: FDEPQNSSGT MGARLSADAT LIRALVGDAL SLAVQNVASA ASGLIIAFTA SWELALIILV MLPLIGINGF VQVKFMKGFS ADAKSKYEEA SQVANDAVGS
0901: IRTVASFCAE EKVMQMYKKQ CEGPIKDGIK QGFISGLGFG FSFFILFCVY ATSFYAGARL VEDGKTTFNN VFQVFFALTM AAIGISQSST FAPDSSKAKV
1001: AAASIFAIID RKSKIDSSDE TGTVLENVKG DIELRHLSFT YPARPDIQIF RDLCLTIRAG KTVALVGESG SGKSTVISLL QRFYDPDSGH ITLDGVELKK
1101: LQLKWLRQQM GLVGQEPVLF NDTIRANIAY GKGSEEAATE SEIIAAAELA NAHKFISSIQ QGYDTVVGER GIQLSGGQKQ RVAIARAIVK EPKILLLDEA
1201: TSALDAESER VVQDALDRVM VNRTTIVVAH RLSTIKNADV IAVVKNGVIA EKGTHETLIK IEGGVYASLV QLHMTASN
Arabidopsis Description
ABCB11ABC transporter B family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FWX7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.